RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Wnk2Q3UH66 2149 aa11.37□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Zfp407G3UVV3 2246 aa11.37□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 MyofQ69ZN7 2048 aaKnown RBP11.37□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Olfr1192-ps1A0A1L1SRD7 309 aa11.37□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 P04945 108 aa11.37□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 ApohQ01339 345 aa11.37□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Olfr491Q8VG06 310 aa11.37□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Smad7O35253 426 aa11.37□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Vamp8O70404 101 aa11.37□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Rasl11aQ6IMB1 242 aa11.37□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Eda2rQ8BX35 297 aa11.37□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Olfr976Q8VF15 326 aa11.37□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Sptan1P16546 2472 aaKnown RBP11.36□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Ighv7-3A0A075B5R2 120 aa11.36□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Pcp4P63054 62 aa11.36□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Lmo1Q924W9 156 aa11.36□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Itgb1bp1O35671 200 aa11.36□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Znf146Q8BQN6 292 aa11.36□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Gm14214V9GX35 225 aa11.36□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 1500009C09RikD3YYW9 81 aa11.36□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Olfr1331K7N684 317 aa11.36□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Pfn1P62962 140 aa11.36□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Gm10192Q3V0S1 108 aa11.36□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Olfr1333Q7TQV7 317 aa11.36□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Olfr523Q8VFE7 317 aa11.36□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Gm45213A0A0U1RNZ6 101 aa11.35□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 C1qtnf5Q8K479 243 aa11.35□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Tac4Q99N14 128 aa11.35□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Tmem89Q9DA04 169 aa11.35□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Ighv1-7A0A075B5T7 117 aa11.35□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Trbv13-3A0A0B4J1H2 113 aa11.35□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Znrf2Q71FD5 238 aa11.35□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Cep250Q60952 2414 aa11.35□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Myo7bQ99MZ6 2113 aa11.35□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Trbv19A0A0B4J1H4 117 aa11.35□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Pax1P09084 446 aa11.35□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 P18525 117 aa11.35□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Dlx6P70397 175 aa11.35□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Parm1Q923D3 296 aa11.35□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Prss29Q99MS4 279 aa11.35□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Q9D8L0 127 aa11.35□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Dnajc13D4AFX7 2248 aaKnown RBP11.35□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Bcl6bO88282 474 aa11.35□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 ElnP54320 860 aa11.35□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Pate4Q09098 99 aa11.35□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Gm10118Q8C8J5 116 aa11.35□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Olfr1199Q8VF94 310 aa11.35□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Pth2Q91W27 100 aa11.35□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Errfi1Q99JZ7 461 aa11.35□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Klk10Q99M20 278 aa11.35□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Cox6cQ9CPQ1 76 aa11.35□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Ighv5-9A0A075B5Q2 117 aa11.34□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Tmem200bD3Z0P8 284 aa11.34□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 GchfrP99025 84 aa11.34□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 NrepQ07475 68 aa11.34□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Zcwpw2Q08EN7 125 aa11.34□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Tmprss12Q3V0Q7 336 aa11.34□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Tmem256Q5F285 113 aa11.34□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 GlmpQ9JHJ3 404 aa11.34□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Igkv19-93A0A0G2JFZ3 115 aa11.34□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Gm45785A0A1B0GT05 94 aa11.34□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Svs5P30933 122 aa11.34□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Gm9945Q8BNZ3 91 aa11.34□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Vmn1r70Q8R254 298 aa11.34□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Rnf151Q9CQ29 239 aa11.34□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Gm17727E9Q4V7 109 aa11.34□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Id3P41133 119 aa11.34□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Ube2d2bQ6ZWY6 147 aa11.34□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Wfdc21Q8BTE6 63 aa11.34□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Olfr810Q8VFH9 312 aa11.34□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Mrps11Q9DCA2 191 aaKnown RBP11.34□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Sox15P43267 231 aa11.33□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Snx22Q8C084 192 aa11.33□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 1110002E22RikE0CYV9 1786 aa11.33□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Gm13030A2APQ6 143 aa11.33□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Sh3bgrl3Q91VW3 93 aa11.33□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Timm23Q9WTQ8 209 aa11.33□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 IcosQ9WVS0 200 aa11.33□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Trbv3A0A0A6YYE2 117 aa11.33□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Anapc13Q8R034 74 aa11.33□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Znf22Q9ERU3 237 aa11.33□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Ypel3P61237 119 aa11.33□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 KncnQ307W7 124 aa11.33□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Vmn1r197Q8R265 298 aa11.33□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Tln2Q71LX4 2375 aa11.33□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Ighv1-81A0A075B5Y4 117 aa11.32□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Dock9Q8BIK4 2055 aa11.32□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Armcx4E9PWM3 2356 aa11.32□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Wisp3D3Z5L9 354 aa11.32□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Nr2c2apQ3TV70 140 aa11.32□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Olfr1337A2ACY8 315 aa11.32□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Ccl17F6R5P4 103 aa11.32□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Mbd6Q3TY92 1003 aa11.32□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Gm10775Q3V290 127 aa11.32□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Rnf144bQ8BKD6 301 aa11.32□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Ighv5-12-4A0A0A6YWG4 117 aa11.32□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Reg1P43137 165 aa11.32□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Tm2d3Q8BJ83 261 aa11.32□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Tmem167aQ9CR64 72 aa11.32□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Rabac1Q9Z0S9 185 aa11.32□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 64.5 ms