RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Cox19Q8K0C8 92 aa16.47■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Zfp53Q9Z117 652 aa16.47■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Ighv6-4A0A0A6YX19 119 aa16.46■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Gm45800A0A1B0GT24 152 aa16.46■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 P01787 123 aa16.46■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 FusP56959 518 aaKnown RBP16.46■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Ube2l3P68037 154 aaKnown RBP16.46■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Gm10803Q3TZS6 135 aa16.46■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Bola1Q9D8S9 137 aaKnown RBP16.46■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 1700008P02RikQ9DAJ8 175 aa16.46■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Olfr609E9Q4X7 319 aa16.45■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 ParlQ5XJY4 377 aa16.45■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Usmg5Q78IK2 58 aa16.45■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 RetnlgQ8K426 117 aa16.45■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Olfr1243Q8VGM7 305 aa16.45■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Mrpl27Q99N92 148 aa16.45■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 V1rd19Q3KNP5 305 aa16.45■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Gls2Q571F8 602 aa16.45■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Olfr148Q60887 310 aa16.45■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Gm12689Q8BQU9 117 aa16.45■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Nus1Q99LJ8 297 aa16.45■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 IcosQ9WVS0 200 aa16.45■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Gm20422E9PUR3 255 aa16.44■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 P01801 115 aa16.44■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 P01802 115 aa16.44■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Phxr2P15972 65 aa16.44■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Cd200r3Q5UKY4 296 aa16.44■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Gpr87Q99MT7 358 aa16.44■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Trappc2lQ9JME7 139 aa16.44■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Gm6525A0A0A6YW33 106 aa16.43■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Ighv1-74A0A0G2JGK2 117 aa16.43■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Akirin2B1AXD8 201 aa16.43■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Gm3512L7N206 146 aa16.43■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Ebi3O35228 228 aa16.43■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Ang3P97802 145 aa16.43■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Siah2Q06986 325 aa16.43■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Znf329Q6GQR8 522 aa16.43■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Ccl24Q9JKC0 119 aa16.43■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Gm12886B1AZM5 119 aa16.42■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 P01727 129 aa16.42■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Atp6v0bQ91V37 205 aa16.42■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Tbx19Q99ME7 446 aa16.42■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Cmtm2bQ9DAC0 210 aa16.42■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Rgs21V9GXQ3 152 aa16.42■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Olfr1024A2ASU7 327 aa16.42■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Gnb4P29387 340 aa16.42■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Crip1P63254 77 aa16.42■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Defb26Q30KN7 186 aa16.42■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Phox2aQ62066 280 aa16.42■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Olfr1026Q7TR90 307 aa16.42■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Msrb3Q8BU85 253 aa16.42■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Olfr1412Q8VET3 321 aa16.42■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Klk10Q99M20 278 aa16.42■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 SelenofQ9ERR7 162 aa16.42■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Ighv1-16A0A075B5U1 98 aa16.41■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Trav6n-5A0A075B621 112 aa16.41■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Trav6-5A0A075B6B5 112 aa16.41■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Ighv5-16A0A0B4J1P4 117 aa16.41■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 H2al1jA2BFR3 109 aa16.41■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 P01792 123 aa16.41■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Gpr183Q3U6B2 357 aa16.41■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Psg25Q497W1 475 aa16.41■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Znf641Q8BZ34 422 aa16.41■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Olfr1256Q8VGP1 306 aa16.41■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Olfr124Q8VGW6 315 aa16.41■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Ythdf2Q91YT7 579 aaKnown RBP16.41■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Uqcc1Q9CWU6 295 aa16.41■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Slc25a39Q9D8K8 359 aa16.41■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 AtrQ9JKK8 2635 aa16.4■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Nkx6-2D3Z4R4 277 aa16.4■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 P03980 138 aa16.4■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Atp6v0cP63082 155 aa16.4■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Trav15-1-dv6-1Q5R1D2 117 aa16.4■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Mrps26Q80ZS3 200 aa16.4■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Susd2Q9DBX3 820 aa16.4■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Atoh7Q9Z2E5 149 aa16.4■□□□□ 0.22
Ccdc88a-202ENSMUST00000109477 Igkv4-90A0A075B5L3 117 aa16.39■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Fgf5P15656 264 aa16.39■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Evi2aP20934 223 aa16.39■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 EtdQ80SW5 59 aa16.39■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Mrpl18Q9CQL5 180 aa16.39■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Tmem128Q9CZB9 163 aa16.39■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Fbn1Q61554 2873 aaKnown RBP16.39■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Gm3250E9Q1M3 230 aa16.39■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Gm5129F6YHA9 99 aa16.39■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Dppa1Q810Y7 116 aa16.39■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Fbxo25Q9D2Y6 357 aa16.39■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Ms4a4bQ9ES61 226 aa16.39■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Trbv3A0A0A6YYE2 117 aa16.38■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Hbb-bh2B2RVB7 147 aa16.38■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Nat1P50294 290 aa16.38■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Tas2r114Q7M722 309 aa16.38■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Olfr810Q8VFH9 312 aa16.38■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 RhebQ921J2 184 aa16.38■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Shisa9Q9CZN4 424 aa16.38■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Gpr34Q9R1K6 375 aa16.38■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 IgipA0A1B0GR74 53 aa16.37■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Gpm6bP35803 328 aa16.37■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Igfbp1P47876 272 aa16.37■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Gm9961Q8BNV2 113 aa16.37■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 34.4 ms