RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Gm10644Q3TZG3 87 aa7.88□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Gpr6Q6YNI2 363 aa7.88□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Chac2Q9CQG1 178 aa7.88□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Uqcrfs1Q9CR68 274 aa7.88□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Pf4Q9Z126 105 aa7.88□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Trav3-4A0A075B654 114 aa7.87□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Ighv1-19A0A0A6YWX0 117 aa7.87□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Ebi3O35228 228 aa7.87□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Defa-rs12P50716 91 aa7.87□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 MiaQ61865 130 aa7.87□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Gm15294V9GXA7 121 aa7.87□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Igkv14-126A0A075B5K0 117 aa7.87□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Tcrg-C2A0A075B5Z2 167 aa7.87□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 P01853 167 aa7.87□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 PigpQ9JHG1 132 aa7.87□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Cfap54Q8C6S9 3106 aa7.86□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Psmb8P28063 276 aa7.86□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Msrb2Q78J03 175 aa7.86□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Smim37Q8BT35 56 aa7.86□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 F930015N05RikQ8C3A3 210 aa7.86□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Il25Q8VHH8 169 aa7.86□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Zfp53Q9Z117 652 aa7.86□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Col27a1Q5QNQ9 1845 aa7.86□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Gm4064A0A087WR82 380 aa7.86□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Gm45717A0A1B0GT68 152 aa7.86□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Gm10352B2RWR6 380 aa7.86□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Tmem265E9Q8G3 109 aa7.86□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Gm21693J3QK27 380 aa7.86□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Rbmy1a1O35698 380 aa7.86□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Ube2l3P68037 154 aaKnown RBP7.86□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Zfp936Q3ULA8 456 aa7.86□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Cd200r3Q5UKY4 296 aa7.86□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Slamf7Q8BHK6 333 aa7.86□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Slc25a16Q8C0K5 332 aa7.86□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Fkbp1bQ9Z2I2 108 aa7.86□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Crybg1A0A0G2JG52 2065 aa7.85□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Arl16B1ATY8 173 aa7.85□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Gm9857F7CXR1 130 aa7.85□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 MyocosQ3UWS6 143 aa7.85□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Dtx1Q61010 627 aa7.85□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Gm5111Q8C9M4 190 aa7.85□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Mob3bQ8VE04 216 aa7.85□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Pip4p2Q9CZX7 257 aa7.85□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Ppp1r27Q9D119 154 aa7.85□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Dnah12Q3V0Q1 3086 aa7.85□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Olfr364-ps1A0A140T8Q2 307 aa7.85□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Cldn34c2J3QNM1 233 aa7.85□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Myod1P10085 318 aa7.85□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Q0VG49 157 aa7.85□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Olfr904Q7TRC9 310 aa7.85□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Morn3Q8C5T4 241 aa7.85□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Cldn34c1Q8K193 234 aa7.85□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Znf672Q99LH4 468 aa7.85□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 NpffQ9WVA8 114 aa7.85□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Ighv1-36A0A0A6YXT2 117 aa7.84□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Hbb-bsA8DUK4 147 aa7.84□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Hbb-b1P02088 147 aa7.84□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 PgfP49764 158 aa7.84□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 MycbQ6P8Z1 170 aa7.84□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Tmem190Q9D2E9 166 aa7.84□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Olfr894Q9EQB2 313 aa7.84□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Gm19410A0A140LJC7 2098 aa7.84□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Gm21863J3KMP8 111 aa7.84□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 P01787 123 aa7.84□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Psmg4P0C7N9 123 aa7.84□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Rbp4Q00724 201 aa7.84□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 GgnQ80WJ1 673 aa7.84□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Q8BTG6 205 aa7.84□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Gm17324Q8C6J8 137 aa7.84□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Mrpl3Q99N95 348 aa7.84□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Klk5Q9D140 293 aa7.84□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Znf22Q9ERU3 237 aa7.84□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Dusp14Q9JLY7 198 aa7.84□□□□□ -1.15
Hmgb1-201ENSMUST00000085546 Trbv31A0A075B5J5 111 aa7.84□□□□□ -1.16
Hmgb1-201ENSMUST00000085546 Igkv1-132A0A0B4J1H9 120 aa7.84□□□□□ -1.16
Hmgb1-201ENSMUST00000085546 Zfp493E9Q1L8 384 aa7.84□□□□□ -1.16
Hmgb1-201ENSMUST00000085546 Gm6970F7DCP6 221 aa7.84□□□□□ -1.16
Hmgb1-201ENSMUST00000085546 Gm10097J3KMK7 105 aa7.84□□□□□ -1.16
Hmgb1-201ENSMUST00000085546 Cldn34c3J3QJW5 233 aa7.84□□□□□ -1.16
Hmgb1-201ENSMUST00000085546 Lgals9O08573 353 aaKnown RBP7.84□□□□□ -1.16
Hmgb1-201ENSMUST00000085546 P01788 123 aa7.84□□□□□ -1.16
Hmgb1-201ENSMUST00000085546 Defa3P28310 93 aa7.84□□□□□ -1.16
Hmgb1-201ENSMUST00000085546 Defa10P50708 93 aa7.84□□□□□ -1.16
Hmgb1-201ENSMUST00000085546 Defa15P50713 93 aa7.84□□□□□ -1.16
Hmgb1-201ENSMUST00000085546 Scnm1Q8K136 229 aa7.84□□□□□ -1.16
Hmgb1-201ENSMUST00000085546 AamdcQ8R0P4 122 aa7.84□□□□□ -1.16
Hmgb1-201ENSMUST00000085546 Ifi27l2aQ8R412 90 aa7.84□□□□□ -1.16
Hmgb1-201ENSMUST00000085546 TctaQ8VEA7 122 aa7.84□□□□□ -1.16
Hmgb1-201ENSMUST00000085546 Prss29Q99MS4 279 aa7.84□□□□□ -1.16
Hmgb1-201ENSMUST00000085546 Cep350E9Q309 3095 aa7.83□□□□□ -1.16
Hmgb1-201ENSMUST00000085546 Ighv1-39A0A075B5V5 117 aa7.83□□□□□ -1.16
Hmgb1-201ENSMUST00000085546 RhodP97348 210 aa7.83□□□□□ -1.16
Hmgb1-201ENSMUST00000085546 Cks1brtQ3UNC9 96 aa7.83□□□□□ -1.16
Hmgb1-201ENSMUST00000085546 Gm813Q3UWK9 176 aa7.83□□□□□ -1.16
Hmgb1-201ENSMUST00000085546 Fam57aQ5ND56 257 aa7.83□□□□□ -1.16
Hmgb1-201ENSMUST00000085546 Ramp3Q9WUP1 147 aa7.83□□□□□ -1.16
Hmgb1-201ENSMUST00000085546 Trav7n-5A0A075B604 112 aa7.83□□□□□ -1.16
Hmgb1-201ENSMUST00000085546 Trav14d-1A0A075B6B1 121 aa7.83□□□□□ -1.16
Hmgb1-201ENSMUST00000085546 Trav14n-2A0A0G2JDF5 121 aa7.83□□□□□ -1.16
Hmgb1-201ENSMUST00000085546 Igkv1-131A0A140T8M8 120 aa7.83□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 47.4 ms