RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Zfp493E9Q1L8 384 aa18.07■□□□□ 0.48
Cln6-201ENSMUST00000034776 Cldn1O88551 211 aa18.07■□□□□ 0.48
Cln6-201ENSMUST00000034776 Ccl1P10146 92 aa18.07■□□□□ 0.48
Cln6-201ENSMUST00000034776 Trbv1A0A0B4J1G7 116 aa18.06■□□□□ 0.48
Cln6-201ENSMUST00000034776 Gm21834J3QN05 151 aa18.06■□□□□ 0.48
Cln6-201ENSMUST00000034776 BsgP18572 389 aaKnown RBP18.06■□□□□ 0.48
Cln6-201ENSMUST00000034776 Gm10334Q792Y8 246 aa18.06■□□□□ 0.48
Cln6-201ENSMUST00000034776 C130073F10RikQ8C4L8 201 aa18.06■□□□□ 0.48
Cln6-201ENSMUST00000034776 Atp6v0e1Q9CQD8 81 aa18.06■□□□□ 0.48
Cln6-201ENSMUST00000034776 Nbeal1E9PYP2 2688 aa18.05■□□□□ 0.48
Cln6-201ENSMUST00000034776 Ascl2O35885 263 aa18.05■□□□□ 0.48
Cln6-201ENSMUST00000034776 Pilrb2Q2YFS1 225 aa18.05■□□□□ 0.48
Cln6-201ENSMUST00000034776 Habp2Q8K0D2 558 aa18.05■□□□□ 0.48
Cln6-201ENSMUST00000034776 Susd2Q9DBX3 820 aa18.05■□□□□ 0.48
Cln6-201ENSMUST00000034776 Trappc2lQ9JME7 139 aa18.05■□□□□ 0.48
Cln6-201ENSMUST00000034776 Ypel3P61237 119 aa18.05■□□□□ 0.48
Cln6-201ENSMUST00000034776 Olfr149Q60888 311 aa18.05■□□□□ 0.48
Cln6-201ENSMUST00000034776 Rasl11aQ6IMB1 242 aa18.05■□□□□ 0.48
Cln6-201ENSMUST00000034776 Scnm1Q8K136 229 aa18.05■□□□□ 0.48
Cln6-201ENSMUST00000034776 Olfr509Q8VF20 321 aa18.05■□□□□ 0.48
Cln6-201ENSMUST00000034776 Olfr872E9PVW2 323 aa18.04■□□□□ 0.48
Cln6-201ENSMUST00000034776 Znf329Q6GQR8 522 aa18.04■□□□□ 0.48
Cln6-201ENSMUST00000034776 Srsf1Q6PDM2 248 aaKnown RBP18.04■□□□□ 0.48
Cln6-201ENSMUST00000034776 Gm17334Q8C6U3 126 aa18.04■□□□□ 0.48
Cln6-201ENSMUST00000034776 Tmem189Q99LQ7 271 aa18.04■□□□□ 0.48
Cln6-201ENSMUST00000034776 Btf3l4Q9CQH7 158 aaKnown RBP18.04■□□□□ 0.48
Cln6-201ENSMUST00000034776 Spink12Q9D256 87 aa18.04■□□□□ 0.48
Cln6-201ENSMUST00000034776 Rnf212F6TQD1 307 aa18.04■□□□□ 0.48
Cln6-201ENSMUST00000034776 Cdx1P18111 268 aa18.04■□□□□ 0.48
Cln6-201ENSMUST00000034776 Prrx2Q06348 247 aa18.04■□□□□ 0.48
Cln6-201ENSMUST00000034776 V1rd19Q3KNP5 305 aa18.04■□□□□ 0.48
Cln6-201ENSMUST00000034776 Minos1Q7TNS2 76 aa18.04■□□□□ 0.48
Cln6-201ENSMUST00000034776 Uqcrfs1Q9CR68 274 aa18.04■□□□□ 0.48
Cln6-201ENSMUST00000034776 Smug1Q6P5C5 279 aa18.03■□□□□ 0.48
Cln6-201ENSMUST00000034776 OstcQ78XF5 149 aa18.03■□□□□ 0.48
Cln6-201ENSMUST00000034776 Chd8Q09XV5 2582 aaKnown RBP18.02■□□□□ 0.48
Cln6-201ENSMUST00000034776 Gm15293D3YX02 93 aa18.02■□□□□ 0.48
Cln6-201ENSMUST00000034776 BC030500E9Q6W0 185 aa18.02■□□□□ 0.48
Cln6-201ENSMUST00000034776 MgpP19788 104 aa18.02■□□□□ 0.48
Cln6-201ENSMUST00000034776 Olfr996Q7TRA0 314 aa18.02■□□□□ 0.48
Cln6-201ENSMUST00000034776 Gng5Q80SZ7 68 aa18.02■□□□□ 0.48
Cln6-201ENSMUST00000034776 Tusc5Q8C838 173 aa18.02■□□□□ 0.48
Cln6-201ENSMUST00000034776 Zfp114B2RRA8 586 aa18.02■□□□□ 0.47
Cln6-201ENSMUST00000034776 Gm10020E9QAZ2 204 aa18.02■□□□□ 0.47
Cln6-201ENSMUST00000034776 Gm5294J3QP53 216 aa18.02■□□□□ 0.47
Cln6-201ENSMUST00000034776 Meox2P32443 303 aa18.02■□□□□ 0.47
Cln6-201ENSMUST00000034776 Olfr1537P34983 314 aa18.02■□□□□ 0.47
Cln6-201ENSMUST00000034776 Trp53rkaQ5U452 244 aa18.02■□□□□ 0.47
Cln6-201ENSMUST00000034776 Olfr1030Q8VFL5 318 aa18.02■□□□□ 0.47
Cln6-201ENSMUST00000034776 Olfr1256Q8VGP1 306 aa18.02■□□□□ 0.47
Cln6-201ENSMUST00000034776 Tp53rkQ99PW4 244 aa18.02■□□□□ 0.47
Cln6-201ENSMUST00000034776 Rpl15Q9CZM2 204 aaKnown RBP18.02■□□□□ 0.47
Cln6-201ENSMUST00000034776 V1ra8Q9EQ48 279 aa18.02■□□□□ 0.47
Cln6-201ENSMUST00000034776 1700056E22RikF7CNM6 234 aa18.01■□□□□ 0.47
Cln6-201ENSMUST00000034776 Slc25a5P51881 298 aaKnown RBP18.01■□□□□ 0.47
Cln6-201ENSMUST00000034776 Btf3Q64152 204 aaKnown RBP18.01■□□□□ 0.47
Cln6-201ENSMUST00000034776 Tbx19Q99ME7 446 aa18.01■□□□□ 0.47
Cln6-201ENSMUST00000034776 Ms4a6bQ99N09 244 aa18.01■□□□□ 0.47
Cln6-201ENSMUST00000034776 Ighv1-77A0A0G2JGS9 117 aa18.01■□□□□ 0.47
Cln6-201ENSMUST00000034776 Ebi3O35228 228 aa18.01■□□□□ 0.47
Cln6-201ENSMUST00000034776 Sox15P43267 231 aa18■□□□□ 0.47
Cln6-201ENSMUST00000034776 Tac3P55099 116 aa18■□□□□ 0.47
Cln6-201ENSMUST00000034776 Atp6v0cP63082 155 aa18■□□□□ 0.47
Cln6-201ENSMUST00000034776 Gm12169F2Z474 250 aa17.99■□□□□ 0.47
Cln6-201ENSMUST00000034776 Cela2aP05208 271 aa17.99■□□□□ 0.47
Cln6-201ENSMUST00000034776 Myod1P10085 318 aa17.99■□□□□ 0.47
Cln6-201ENSMUST00000034776 Reg1P43137 165 aa17.99■□□□□ 0.47
Cln6-201ENSMUST00000034776 Spint3Q3UW09 88 aa17.99■□□□□ 0.47
Cln6-201ENSMUST00000034776 Prss3Q792Z0 246 aaKnown RBP17.99■□□□□ 0.47
Cln6-201ENSMUST00000034776 PgpQ8CHP8 321 aa17.99■□□□□ 0.47
Cln6-201ENSMUST00000034776 Olfr262Q8VFV8 312 aa17.99■□□□□ 0.47
Cln6-201ENSMUST00000034776 Slc25a39Q9D8K8 359 aa17.99■□□□□ 0.47
Cln6-201ENSMUST00000034776 Tmprss5Q9ER04 455 aa17.99■□□□□ 0.47
Cln6-201ENSMUST00000034776 Gm15557A6PWY0 234 aa17.99■□□□□ 0.47
Cln6-201ENSMUST00000034776 NdnP25233 325 aa17.99■□□□□ 0.47
Cln6-201ENSMUST00000034776 Smim7Q5RKS2 75 aa17.99■□□□□ 0.47
Cln6-201ENSMUST00000034776 Oraov1Q8CH62 137 aa17.99■□□□□ 0.47
Cln6-201ENSMUST00000034776 Utp20Q5XG71 2788 aaKnown RBP17.99■□□□□ 0.47
Cln6-201ENSMUST00000034776 Trav7-1A0A0G2JEV5 112 aa17.98■□□□□ 0.47
Cln6-201ENSMUST00000034776 Gpm6bP35803 328 aa17.98■□□□□ 0.47
Cln6-201ENSMUST00000034776 Timp3P39876 211 aa17.98■□□□□ 0.47
Cln6-201ENSMUST00000034776 Prok1Q14A28 105 aa17.98■□□□□ 0.47
Cln6-201ENSMUST00000034776 Znf474Q6V5K9 347 aa17.98■□□□□ 0.47
Cln6-201ENSMUST00000034776 Mgst1Q91VS7 155 aa17.98■□□□□ 0.47
Cln6-201ENSMUST00000034776 Tmem210Q9D2F0 147 aa17.98■□□□□ 0.47
Cln6-201ENSMUST00000034776 Abca12E9Q876 2595 aa17.98■□□□□ 0.47
Cln6-201ENSMUST00000034776 Zfp109A0A0U1RPC5 652 aa17.98■□□□□ 0.47
Cln6-201ENSMUST00000034776 Adcyap1O70176 175 aa17.98■□□□□ 0.47
Cln6-201ENSMUST00000034776 Txn2P97493 166 aa17.98■□□□□ 0.47
Cln6-201ENSMUST00000034776 Hist3h2bbQ8CGP0 126 aa17.98■□□□□ 0.47
Cln6-201ENSMUST00000034776 Hist3h2baQ9D2U9 126 aa17.98■□□□□ 0.47
Cln6-201ENSMUST00000034776 Abca1P41233 2261 aa17.97■□□□□ 0.47
Cln6-201ENSMUST00000034776 Ighv6-3A0A075B5T2 118 aa17.97■□□□□ 0.47
Cln6-201ENSMUST00000034776 Immp2lQ8BPT6 175 aa17.97■□□□□ 0.47
Cln6-201ENSMUST00000034776 Pitpnc1Q8K4R4 332 aa17.97■□□□□ 0.47
Cln6-201ENSMUST00000034776 Nus1Q99LJ8 297 aa17.97■□□□□ 0.47
Cln6-201ENSMUST00000034776 Ankrd11E9Q4F7 2643 aa17.97■□□□□ 0.47
Cln6-201ENSMUST00000034776 Olfr1369-ps1A0A140T8K7 317 aa17.96■□□□□ 0.47
Cln6-201ENSMUST00000034776 Gm26965M0QWH4 86 aa17.96■□□□□ 0.47
Cln6-201ENSMUST00000034776 SeleQ00690 612 aa17.96■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 112.9 ms