RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Znf329Q6GQR8 522 aa13.65□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 C330021F23RikQ8C7T0 141 aa13.65□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 1700084M14RikB1AT01 78 aa13.65□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 P04219 140 aa13.65□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Lynx1P0DP60 116 aa13.65□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Mrps21P58059 87 aa13.65□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Igh-3P01867 404 aa13.65□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Gm10842Q3U587 122 aa13.64□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 BC106179Q8C9L1 186 aa13.64□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Tmem136Q3TYE7 245 aa13.64□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Saxo2Q8BQB6 394 aa13.64□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Iah1Q9DB29 249 aa13.64□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Ighv1-67A0A0G2JFN9 117 aa13.64□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Ndufa11Q9D8B4 141 aa13.64□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Ighv5-12-4A0A0A6YWG4 117 aa13.63□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Fbln7Q501P1 440 aa13.63□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Znf146Q8BQN6 292 aa13.63□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 GlmpQ9JHJ3 404 aa13.63□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Igkv4-63A0A0G2JFU6 117 aa13.63□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Otx1P80205 355 aa13.63□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Q80X32 188 aaKnown RBP13.63□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Klk7Q91VE3 249 aa13.63□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Gm10881P01642 115 aa13.63□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Gm10803Q3TZS6 135 aa13.63□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 C1qtnf9Q4ZJN1 333 aa13.63□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Tmem89Q9DA04 169 aa13.63□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Trav7n-4A0A075B620 113 aa13.62□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Trav3n-3A0A0G2JEM0 114 aa13.62□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Tmem167aQ9CR64 72 aa13.62□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Psmg3Q9CZH3 122 aa13.62□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Dock9Q8BIK4 2055 aa13.62□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Fam19a2Q7TPG7 131 aa13.62□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 GalmQ8K157 342 aa13.62□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 V1ra8Q9EQ48 279 aa13.62□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Ighv1-34A0A075B5V2 117 aa13.62□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 H2al2bA9Z055 111 aa13.62□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Hist3h2bbQ8CGP0 126 aa13.62□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Hist3h2baQ9D2U9 126 aa13.62□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Gm19410A0A140LJC7 2098 aa13.61□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Ighv1-81A0A075B5Y4 117 aa13.61□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Trav19A0A0B4J1K4 119 aa13.61□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Olfr748E9Q9Z0 307 aa13.61□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Gm6871L7N248 545 aa13.61□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 P01680 129 aa13.61□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Pax1P09084 446 aa13.61□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Crybb3Q9JJU9 211 aa13.61□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Gm45861A0A1B0GRY3 1923 aa13.61□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Ccl6P27784 116 aa13.61□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Loxl2P58022 776 aa13.61□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Tnfrsf26P83626 204 aa13.61□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Mrpl36Q99N90 102 aa13.61□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Dkk2Q9QYZ8 259 aa13.61□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Trbv12-2A0A0B4J1H1 124 aa13.61□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 A0A1L1SR50 188 aa13.61□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Spsb3Q571F5 354 aa13.61□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Srsf1Q6PDM2 248 aaKnown RBP13.61□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Igkv14-111A0A140T8P9 117 aa13.61□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Umad1E0CX23 159 aa13.61□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Svs5P30933 122 aa13.61□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Atp5iQ06185 71 aaKnown RBP13.61□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Mrps11Q9DCA2 191 aaKnown RBP13.61□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Igkv14-130A0A0G2JF45 117 aa13.6□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Gm17660B9UIU9 90 aa13.6□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Q4KKZ1 196 aa13.6□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Rnf144bQ8BKD6 301 aa13.6□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Zg16Q8K0C5 167 aa13.6□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Zfp648D3Z0W3 525 aa13.6□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Crim1Q9JLL0 1037 aa13.6□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Myo7bQ99MZ6 2113 aa13.6□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Lgals6O54891 301 aa13.6□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Saa3P04918 122 aa13.6□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 PlnP61014 52 aa13.6□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Spcs1Q9D958 161 aa13.6□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Znf431E9QAG8 526 aa13.6□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Hspe1Q64433 102 aaKnown RBP13.6□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Vmn1r216Q8R257 298 aa13.6□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Tanc1Q0VGY8 1856 aa13.59□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Gm12830F6XVH0 157 aa13.59□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Cacng7P62956 275 aa13.59□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Mzt1Q8BUR9 78 aa13.59□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Trdv5A0A075B661 115 aa13.59□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 SeleQ00690 612 aa13.59□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Cphx2Q8BX39 182 aa13.59□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Il1f10Q8R459 152 aa13.59□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Rnase6Q9D244 153 aa13.59□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Trbv31A0A075B5J5 111 aa13.59□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Trdv1A0A075B657 112 aa13.59□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Q9D727 114 aa13.59□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Dock4P59764 1978 aa13.59□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Ighv1-31A0A0A6YWK5 117 aa13.59□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 P01726 129 aa13.59□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 TcraP01849 138 aa13.59□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Tcl1b2P56841 117 aa13.59□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Mllt11P97783 90 aa13.59□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Mgst3Q9CPU4 153 aa13.59□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Prr23a3Q9CWP9 254 aa13.59□□□□□ -0.23
Ubfd1-201ENSMUST00000033158 Olfr33Q8VGX7 318 aa13.58□□□□□ -0.24
Ubfd1-201ENSMUST00000033158 Rchy1Q9CR50 261 aa13.58□□□□□ -0.24
Ubfd1-201ENSMUST00000033158 Klhdc1Q80YG3 406 aa13.58□□□□□ -0.24
Ubfd1-201ENSMUST00000033158 Ormdl2Q9CQZ0 153 aa13.58□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 91.6 ms