RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Plp1P60202 277 aa14.95□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Shisal1Q0VBP7 198 aa14.95□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Olfr211Q8VGH2 309 aa14.95□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Olfr1242Q8VGM6 306 aa14.95□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Ube2cQ9D1C1 179 aa14.95□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Ovol3D3YYM0 189 aa14.95□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Gm11733Q8BQP1 125 aa14.95□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Q8C3M9 231 aa14.95□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Q9DAZ5 108 aa14.95□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Susd2Q9DBX3 820 aa14.95□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Rnase4Q9JJH1 148 aa14.95□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Ahctf1Q8CJF7 2243 aaKnown RBP14.94□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Gm11027G8JL69 66 aa14.94□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Scgb1b3J3QJY4 93 aa14.94□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Crip1P63254 77 aa14.94□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Ppp1r3cQ7TMB3 317 aa14.94□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Arl6ip6Q8BH07 226 aa14.94□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Olfr1262Q8VGN2 304 aa14.94□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 KalrnA2CG49 2964 aa14.94□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Trav12-3A0A075B648 115 aa14.93□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Gm9964E9Q9S5 144 aa14.93□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Gm9733Q1AN91 178 aa14.93□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Olfr1434Q7TQR9 312 aa14.93□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 PgpQ8CHP8 321 aa14.93□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 RnasekQ8K3C0 98 aa14.93□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Etfrf1Q91V16 86 aa14.93□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 MmdQ9CQY7 238 aa14.93□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Q9D7E4 109 aa14.93□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Mixl1Q9WUI0 231 aa14.93□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Tmem116A0A0G2JGD3 401 aa14.93□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 IgipA0A1B0GR74 53 aa14.93□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Mex3bQ69Z36 601 aaKnown RBP14.93□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Ndufa2Q9CQ75 99 aa14.93□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Ovol1Q9WTJ2 267 aa14.93□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 AplnrQ9WV08 377 aa14.93□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Tln2Q71LX4 2375 aa14.93□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Olfr1331K7N684 317 aa14.92□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Olfr1333Q7TQV7 317 aa14.92□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Eda2rQ8BX35 297 aa14.92□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Dolpp1Q9JMF7 238 aa14.92□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Gvin1Q80SU7 2427 aa14.92□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 5730522E02RikQ5SP45 163 aa14.92□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Lrfn3Q8BLY3 626 aa14.92□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Chac2Q9CQG1 178 aa14.92□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Trav7n-5A0A075B604 112 aa14.91□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Trav3n-3A0A0G2JEM0 114 aa14.91□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Zfp114B2RRA8 586 aa14.91□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Olfr1380Q7TQT5 311 aa14.91□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Tnfsf18Q7TS55 173 aa14.91□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Prickle3Q80VL3 624 aa14.91□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Rbfox2Q8BP71 449 aaKnown RBP14.91□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 PpbpQ9EQI5 113 aa14.91□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Ighv14-3A0A075B5R9 117 aa14.9□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 P04944 107 aa14.9□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 CebpdQ00322 268 aa14.9□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Olfr745Q7TRL9 328 aa14.9□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Fam241bQ9D882 120 aa14.9□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Gm17660B9UIU9 90 aa14.9□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Rnf212bD3Z423 297 aa14.9□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 P0C1Z5 52 aa14.9□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 LoxP28301 411 aa14.9□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Fabp6P51162 128 aa14.9□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Sox21Q811W0 276 aa14.9□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Ncor1Q60974 2453 aa14.89□□□□□ -0.03
Shkbp1-201ENSMUST00000003857 Atp6v0cP63082 155 aa14.89□□□□□ -0.03
Shkbp1-201ENSMUST00000003857 Gfra1P97785 468 aa14.89□□□□□ -0.03
Shkbp1-201ENSMUST00000003857 Fam216bQ8CC14 138 aa14.89□□□□□ -0.03
Shkbp1-201ENSMUST00000003857 Dopey1Q8BL99 2399 aa14.89□□□□□ -0.03
Shkbp1-201ENSMUST00000003857 Trav9-1A0A075B601 112 aa14.89□□□□□ -0.03
Shkbp1-201ENSMUST00000003857 1810011H11RikE9PVZ2 95 aa14.89□□□□□ -0.03
Shkbp1-201ENSMUST00000003857 TfpiO54819 306 aa14.89□□□□□ -0.03
Shkbp1-201ENSMUST00000003857 Rpp30O88796 268 aaKnown RBP14.89□□□□□ -0.03
Shkbp1-201ENSMUST00000003857 Gm4792Q569Q2 183 aa14.89□□□□□ -0.03
Shkbp1-201ENSMUST00000003857 Gm26566Q8CAC1 153 aa14.89□□□□□ -0.03
Shkbp1-201ENSMUST00000003857 Trappc2lQ9JME7 139 aa14.89□□□□□ -0.03
Shkbp1-201ENSMUST00000003857 Cldn1O88551 211 aa14.88□□□□□ -0.03
Shkbp1-201ENSMUST00000003857 Mrps21P58059 87 aa14.88□□□□□ -0.03
Shkbp1-201ENSMUST00000003857 Psg25Q497W1 475 aa14.88□□□□□ -0.03
Shkbp1-201ENSMUST00000003857 Abca7Q91V24 2159 aa14.88□□□□□ -0.03
Shkbp1-201ENSMUST00000003857 Igkv1-133A0A0B4J1H8 120 aa14.88□□□□□ -0.03
Shkbp1-201ENSMUST00000003857 SetxA2AKX3 2646 aa14.88□□□□□ -0.03
Shkbp1-201ENSMUST00000003857 1700003H04RikE9PXM2 192 aa14.88□□□□□ -0.03
Shkbp1-201ENSMUST00000003857 Olfr1465Q7TQR2 307 aa14.88□□□□□ -0.03
Shkbp1-201ENSMUST00000003857 Nit1Q8VDK1 323 aa14.88□□□□□ -0.03
Shkbp1-201ENSMUST00000003857 Errfi1Q99JZ7 461 aa14.88□□□□□ -0.03
Shkbp1-201ENSMUST00000003857 Hcfc2Q9D968 241 aa14.88□□□□□ -0.03
Shkbp1-201ENSMUST00000003857 Gm9920D3YVZ2 140 aa14.87□□□□□ -0.03
Shkbp1-201ENSMUST00000003857 Saa4P31532 130 aa14.87□□□□□ -0.03
Shkbp1-201ENSMUST00000003857 Gpm6bP35803 328 aa14.87□□□□□ -0.03
Shkbp1-201ENSMUST00000003857 Lypd8Q9D7S0 255 aa14.87□□□□□ -0.03
Shkbp1-201ENSMUST00000003857 Them7Q9DCP4 223 aa14.87□□□□□ -0.03
Shkbp1-201ENSMUST00000003857 Trav7-1A0A0G2JEV5 112 aa14.87□□□□□ -0.03
Shkbp1-201ENSMUST00000003857 Rpl13a-ps1A0A140T8K2 203 aaKnown RBP14.87□□□□□ -0.03
Shkbp1-201ENSMUST00000003857 V1rd19Q3KNP5 305 aa14.87□□□□□ -0.03
Shkbp1-201ENSMUST00000003857 Gm10775Q3V290 127 aa14.87□□□□□ -0.03
Shkbp1-201ENSMUST00000003857 Ifitm2Q99J93 144 aa14.87□□□□□ -0.03
Shkbp1-201ENSMUST00000003857 Dazap1Q9JII5 406 aaKnown RBP14.87□□□□□ -0.03
Shkbp1-201ENSMUST00000003857 Myo15bI7HPW8 3033 aa14.86□□□□□ -0.03
Shkbp1-201ENSMUST00000003857 Ca2P00920 260 aaKnown RBP14.86□□□□□ -0.03
Shkbp1-201ENSMUST00000003857 C1qtnf5Q8K479 243 aa14.86□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 59.6 ms