RNA–Protein interactions for RNA: ENST00000638709.1

FGFR2-227, Transcript of fibroblast growth factor receptor 2, humanhuman

TSL 5

Gene FGFR2, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR2-227ENST00000638709 COX6A2Q02221 97 aa6.18□□□□□ -1.42
FGFR2-227ENST00000638709 C9orf66Q5T8R8 295 aa6.18□□□□□ -1.42
FGFR2-227ENST00000638709 LINC00612Q8N6U2 182 aa6.18□□□□□ -1.42
FGFR2-227ENST00000638709 SMIM1B2RUZ4 78 aa6.17□□□□□ -1.42
FGFR2-227ENST00000638709 HERV-K104P63124 156 aa6.17□□□□□ -1.42
FGFR2-227ENST00000638709 FHL2Q14192 279 aa6.17□□□□□ -1.42
FGFR2-227ENST00000638709 Q1RN00 199 aa6.17□□□□□ -1.42
FGFR2-227ENST00000638709 ADAMTSL4-AS1Q5T5F5 129 aa6.17□□□□□ -1.42
FGFR2-227ENST00000638709 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.17□□□□□ -1.42
FGFR2-227ENST00000638709 SIGMAR1Q99720 223 aa6.17□□□□□ -1.42
FGFR2-227ENST00000638709 FASNP49327 2511 aaKnown RBP6.17□□□□□ -1.42
FGFR2-227ENST00000638709 GCN1Q92616 2671 aaKnown RBP6.17□□□□□ -1.42
FGFR2-227ENST00000638709 TRAV13-1A0A0B4J241 112 aa6.16□□□□□ -1.42
FGFR2-227ENST00000638709 GAGE12HA6NDE8 117 aa6.16□□□□□ -1.42
FGFR2-227ENST00000638709 ATXN8Q156A1 80 aa6.16□□□□□ -1.42
FGFR2-227ENST00000638709 SFTA2Q6UW10 78 aa6.16□□□□□ -1.42
FGFR2-227ENST00000638709 SMR3AQ99954 134 aa6.16□□□□□ -1.42
FGFR2-227ENST00000638709 TRBV6-8A0A0A6YYG3 113 aa6.16□□□□□ -1.42
FGFR2-227ENST00000638709 A8MZ25 164 aa6.16□□□□□ -1.42
FGFR2-227ENST00000638709 F5H768 121 aa6.16□□□□□ -1.42
FGFR2-227ENST00000638709 FOXI1Q12951 378 aa6.16□□□□□ -1.42
FGFR2-227ENST00000638709 TEN1Q86WV5 123 aa6.16□□□□□ -1.42
FGFR2-227ENST00000638709 LINC01600Q96MT4 127 aa6.16□□□□□ -1.42
FGFR2-227ENST00000638709 Q9H8V8 135 aa6.16□□□□□ -1.42
FGFR2-227ENST00000638709 CUBNO60494 3623 aa6.16□□□□□ -1.42
FGFR2-227ENST00000638709 CRLF1O75462 422 aa6.15□□□□□ -1.42
FGFR2-227ENST00000638709 COX6CP09669 75 aa6.15□□□□□ -1.42
FGFR2-227ENST00000638709 MTURNQ8N3F0 131 aa6.15□□□□□ -1.42
FGFR2-227ENST00000638709 PPDPFLQ8WWR9 84 aa6.15□□□□□ -1.42
FGFR2-227ENST00000638709 ZNF625Q96I27 306 aaPredicted RBP6.15□□□□□ -1.42
FGFR2-227ENST00000638709 NOTCH3Q9UM47 2321 aa6.14□□□□□ -1.43
FGFR2-227ENST00000638709 LOC100131303A0A0U1RQF7 123 aa6.14□□□□□ -1.43
FGFR2-227ENST00000638709 LYRM9A8MSI8 78 aa6.14□□□□□ -1.43
FGFR2-227ENST00000638709 H7C2G1 150 aa6.14□□□□□ -1.43
FGFR2-227ENST00000638709 ICOSQ9Y6W8 199 aa6.14□□□□□ -1.43
FGFR2-227ENST00000638709 TRIAP1O43715 76 aa6.13□□□□□ -1.43
FGFR2-227ENST00000638709 SLC25A20O43772 301 aa6.13□□□□□ -1.43
FGFR2-227ENST00000638709 PRIMA1Q86XR5 153 aa6.13□□□□□ -1.43
FGFR2-227ENST00000638709 LINC00308Q8TCZ7 52 aa6.13□□□□□ -1.43
FGFR2-227ENST00000638709 X6R8D5 127 aa6.13□□□□□ -1.43
FGFR2-227ENST00000638709 NSD1Q96L73 2696 aaPredicted RBP6.13□□□□□ -1.43
FGFR2-227ENST00000638709 APOC4P55056 127 aa6.13□□□□□ -1.43
FGFR2-227ENST00000638709 GAGE6Q13070 117 aa6.13□□□□□ -1.43
FGFR2-227ENST00000638709 LINC01620Q4KN68 170 aa6.13□□□□□ -1.43
FGFR2-227ENST00000638709 CHCHD5Q9BSY4 110 aa6.13□□□□□ -1.43
FGFR2-227ENST00000638709 C9JAW5 83 aa6.12□□□□□ -1.43
FGFR2-227ENST00000638709 INAFM1C9JVW0 142 aa6.12□□□□□ -1.43
FGFR2-227ENST00000638709 DEFB130BP0DP73 79 aa6.12□□□□□ -1.43
FGFR2-227ENST00000638709 DEFB130AP0DP74 79 aa6.12□□□□□ -1.43
FGFR2-227ENST00000638709 RPL13AP40429 203 aaKnown RBP6.12□□□□□ -1.43
FGFR2-227ENST00000638709 MEIG1Q5JSS6 88 aa6.12□□□□□ -1.43
FGFR2-227ENST00000638709 PRO0255Q9UI72 69 aa6.12□□□□□ -1.43
FGFR2-227ENST00000638709 OTOGQ6ZRI0 2925 aa6.12□□□□□ -1.43
FGFR2-227ENST00000638709 A0A1B0GUV1 79 aa6.11□□□□□ -1.43
FGFR2-227ENST00000638709 COX7B2Q8TF08 81 aa6.11□□□□□ -1.43
FGFR2-227ENST00000638709 CARD19Q96LW7 228 aa6.11□□□□□ -1.43
FGFR2-227ENST00000638709 IGHV3OR16-9A0A0B4J2B5 98 aa6.11□□□□□ -1.43
FGFR2-227ENST00000638709 TRBV10-2A0A0K0K1G8 114 aa6.11□□□□□ -1.43
FGFR2-227ENST00000638709 GYPEP15421 78 aa6.11□□□□□ -1.43
FGFR2-227ENST00000638709 NPC2P61916 151 aa6.11□□□□□ -1.43
FGFR2-227ENST00000638709 LINC01561Q8N1V8 128 aa6.11□□□□□ -1.43
FGFR2-227ENST00000638709 ANKRD29Q8N6D5 301 aa6.11□□□□□ -1.43
FGFR2-227ENST00000638709 CITED1Q99966 193 aa6.11□□□□□ -1.43
FGFR2-227ENST00000638709 HECTD1Q9ULT8 2610 aa6.1□□□□□ -1.43
FGFR2-227ENST00000638709 IGLV4-60A0A075B6I1 120 aa6.1□□□□□ -1.43
FGFR2-227ENST00000638709 A0A087WZ39 114 aa6.1□□□□□ -1.43
FGFR2-227ENST00000638709 H3BT86 120 aa6.1□□□□□ -1.43
FGFR2-227ENST00000638709 DAND5Q8N907 189 aa6.1□□□□□ -1.43
FGFR2-227ENST00000638709 CDIP1Q9H305 208 aa6.1□□□□□ -1.43
FGFR2-227ENST00000638709 C2CD3Q4AC94 2353 aa6.09□□□□□ -1.43
FGFR2-227ENST00000638709 TMEM262E9PQX1 116 aa6.09□□□□□ -1.43
FGFR2-227ENST00000638709 LST1O00453 97 aa6.09□□□□□ -1.43
FGFR2-227ENST00000638709 FAM222AQ5U5X8 452 aa6.09□□□□□ -1.43
FGFR2-227ENST00000638709 LINC00959A0A1B0GUT2 108 aa6.08□□□□□ -1.44
FGFR2-227ENST00000638709 PAX4O43316 350 aa6.08□□□□□ -1.44
FGFR2-227ENST00000638709 SS18Q15532 418 aa6.08□□□□□ -1.44
FGFR2-227ENST00000638709 TRAV26-1A0A087WT03 109 aa6.08□□□□□ -1.44
FGFR2-227ENST00000638709 IBA57-AS1B1ANH7 110 aa6.08□□□□□ -1.44
FGFR2-227ENST00000638709 MIFP14174 115 aa6.08□□□□□ -1.44
FGFR2-227ENST00000638709 SHISA2Q6UWI4 295 aa6.08□□□□□ -1.44
FGFR2-227ENST00000638709 SOSTDC1Q6X4U4 206 aa6.08□□□□□ -1.44
FGFR2-227ENST00000638709 VWFP04275 2813 aa6.07□□□□□ -1.44
FGFR2-227ENST00000638709 TRAV13-2A0A0B4J235 113 aa6.07□□□□□ -1.44
FGFR2-227ENST00000638709 COX7A2LO14548 114 aa6.07□□□□□ -1.44
FGFR2-227ENST00000638709 DEFB135Q30KP9 77 aa6.07□□□□□ -1.44
FGFR2-227ENST00000638709 WFDC9Q8NEX5 89 aa6.07□□□□□ -1.44
FGFR2-227ENST00000638709 FN1P02751 2386 aaKnown RBP6.06□□□□□ -1.44
FGFR2-227ENST00000638709 NOTCH2Q04721 2471 aa6.06□□□□□ -1.44
FGFR2-227ENST00000638709 IGHV4-28A0A0C4DH34 117 aa6.06□□□□□ -1.44
FGFR2-227ENST00000638709 IGKV3OR2-268A0A0C4DH90 116 aa6.06□□□□□ -1.44
FGFR2-227ENST00000638709 DAD1P61803 113 aa6.06□□□□□ -1.44
FGFR2-227ENST00000638709 TNP2Q05952 138 aa6.06□□□□□ -1.44
FGFR2-227ENST00000638709 C2orf82Q6UX34 121 aa6.06□□□□□ -1.44
FGFR2-227ENST00000638709 TOMM7Q9P0U1 55 aa6.06□□□□□ -1.44
FGFR2-227ENST00000638709 A0A0U1RRA0 63 aa6.05□□□□□ -1.44
FGFR2-227ENST00000638709 ATP5G1P05496 136 aa6.05□□□□□ -1.44
FGFR2-227ENST00000638709 SPATA3Q8NHX4 192 aa6.05□□□□□ -1.44
FGFR2-227ENST00000638709 NTN5Q8WTR8 489 aaPredicted RBP6.05□□□□□ -1.44
FGFR2-227ENST00000638709 CLEC2BQ92478 149 aa6.05□□□□□ -1.44
FGFR2-227ENST00000638709 UBE2WQ96B02 151 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms