RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 LINC00482Q8N8I6 264 aa6.66□□□□□ -1.34
PDPN-212ENST00000621990 TRAV13-1A0A0B4J241 112 aa6.65□□□□□ -1.34
PDPN-212ENST00000621990 H7C2G1 150 aa6.65□□□□□ -1.34
PDPN-212ENST00000621990 SLC25A20O43772 301 aa6.65□□□□□ -1.34
PDPN-212ENST00000621990 CIRBPQ14011 172 aaKnown RBP6.65□□□□□ -1.34
PDPN-212ENST00000621990 Q9H8V8 135 aa6.65□□□□□ -1.34
PDPN-212ENST00000621990 ICOSQ9Y6W8 199 aa6.65□□□□□ -1.34
PDPN-212ENST00000621990 NOTCH3Q9UM47 2321 aa6.65□□□□□ -1.34
PDPN-212ENST00000621990 LOC100131303A0A0U1RQF7 123 aa6.65□□□□□ -1.35
PDPN-212ENST00000621990 Q1RN00 199 aa6.65□□□□□ -1.35
PDPN-212ENST00000621990 UBE2L6O14933 153 aa6.64□□□□□ -1.35
PDPN-212ENST00000621990 ANKRD29Q8N6D5 301 aa6.64□□□□□ -1.35
PDPN-212ENST00000621990 KIR2DL5BQ8NHK3 375 aa6.64□□□□□ -1.35
PDPN-212ENST00000621990 TRGV4A0A0C4DH28 118 aa6.64□□□□□ -1.35
PDPN-212ENST00000621990 C9JAW5 83 aa6.64□□□□□ -1.35
PDPN-212ENST00000621990 LINC00308Q8TCZ7 52 aa6.64□□□□□ -1.35
PDPN-212ENST00000621990 CDIP1Q9H305 208 aa6.64□□□□□ -1.35
PDPN-212ENST00000621990 TRBV6-8A0A0A6YYG3 113 aa6.63□□□□□ -1.35
PDPN-212ENST00000621990 HERV-K104P63124 156 aa6.63□□□□□ -1.35
PDPN-212ENST00000621990 LINC01620Q4KN68 170 aa6.63□□□□□ -1.35
PDPN-212ENST00000621990 OTOGQ6ZRI0 2925 aa6.63□□□□□ -1.35
PDPN-212ENST00000621990 DAND5Q8N907 189 aa6.63□□□□□ -1.35
PDPN-212ENST00000621990 COPS9Q8WXC6 57 aa6.63□□□□□ -1.35
PDPN-212ENST00000621990 SMR3AQ99954 134 aa6.63□□□□□ -1.35
PDPN-212ENST00000621990 NPC2P61916 151 aa6.63□□□□□ -1.35
PDPN-212ENST00000621990 TRBV10-2A0A0K0K1G8 114 aa6.62□□□□□ -1.35
PDPN-212ENST00000621990 FASNP49327 2511 aaKnown RBP6.62□□□□□ -1.35
PDPN-212ENST00000621990 VWFP04275 2813 aa6.62□□□□□ -1.35
PDPN-212ENST00000621990 COX6CP09669 75 aa6.62□□□□□ -1.35
PDPN-212ENST00000621990 RPL13AP40429 203 aaKnown RBP6.62□□□□□ -1.35
PDPN-212ENST00000621990 HIVEP2P31629 2446 aa6.61□□□□□ -1.35
PDPN-212ENST00000621990 PF4P02776 101 aa6.61□□□□□ -1.35
PDPN-212ENST00000621990 SOSTDC1Q6X4U4 206 aa6.61□□□□□ -1.35
PDPN-212ENST00000621990 PRIMA1Q86XR5 153 aa6.61□□□□□ -1.35
PDPN-212ENST00000621990 GCN1Q92616 2671 aaKnown RBP6.61□□□□□ -1.35
PDPN-212ENST00000621990 SMIM9A6NGZ8 99 aa6.61□□□□□ -1.35
PDPN-212ENST00000621990 LST1O00453 97 aa6.61□□□□□ -1.35
PDPN-212ENST00000621990 X6R8D5 127 aa6.61□□□□□ -1.35
PDPN-212ENST00000621990 CRLF1O75462 422 aa6.6□□□□□ -1.35
PDPN-212ENST00000621990 LY6G6DO95868 133 aa6.6□□□□□ -1.35
PDPN-212ENST00000621990 C2CD3Q4AC94 2353 aa6.6□□□□□ -1.35
PDPN-212ENST00000621990 IGLV4-60A0A075B6I1 120 aa6.6□□□□□ -1.35
PDPN-212ENST00000621990 IGHV3OR16-9A0A0B4J2B5 98 aa6.6□□□□□ -1.35
PDPN-212ENST00000621990 GAGE6Q13070 117 aa6.6□□□□□ -1.35
PDPN-212ENST00000621990 SHISA2Q6UWI4 295 aa6.59□□□□□ -1.35
PDPN-212ENST00000621990 H3BT86 120 aa6.59□□□□□ -1.35
PDPN-212ENST00000621990 COX7B2Q8TF08 81 aa6.59□□□□□ -1.35
PDPN-212ENST00000621990 A0A087WZ39 114 aa6.58□□□□□ -1.36
PDPN-212ENST00000621990 MEIG1Q5JSS6 88 aa6.58□□□□□ -1.36
PDPN-212ENST00000621990 NSD1Q96L73 2696 aaPredicted RBP6.58□□□□□ -1.36
PDPN-212ENST00000621990 CHCHD5Q9BSY4 110 aa6.58□□□□□ -1.36
PDPN-212ENST00000621990 TMEM262E9PQX1 116 aa6.57□□□□□ -1.36
PDPN-212ENST00000621990 DEFB130BP0DP73 79 aa6.57□□□□□ -1.36
PDPN-212ENST00000621990 DEFB130AP0DP74 79 aa6.57□□□□□ -1.36
PDPN-212ENST00000621990 NTN5Q8WTR8 489 aaPredicted RBP6.57□□□□□ -1.36
PDPN-212ENST00000621990 CLEC2BQ92478 149 aa6.57□□□□□ -1.36
PDPN-212ENST00000621990 A0A1B0GUV1 79 aa6.57□□□□□ -1.36
PDPN-212ENST00000621990 C9orf66Q5T8R8 295 aa6.57□□□□□ -1.36
PDPN-212ENST00000621990 COX7A2LO14548 114 aa6.56□□□□□ -1.36
PDPN-212ENST00000621990 XGP55808 180 aa6.56□□□□□ -1.36
PDPN-212ENST00000621990 SPATA3Q8NHX4 192 aa6.56□□□□□ -1.36
PDPN-212ENST00000621990 A0A0U1RRA0 63 aa6.56□□□□□ -1.36
PDPN-212ENST00000621990 LINC00959A0A1B0GUT2 108 aa6.56□□□□□ -1.36
PDPN-212ENST00000621990 LYRM9A8MSI8 78 aa6.56□□□□□ -1.36
PDPN-212ENST00000621990 GYPEP15421 78 aa6.56□□□□□ -1.36
PDPN-212ENST00000621990 C2orf82Q6UX34 121 aa6.56□□□□□ -1.36
PDPN-212ENST00000621990 PRO0255Q9UI72 69 aa6.56□□□□□ -1.36
PDPN-212ENST00000621990 TENM1Q9UKZ4 2725 aa6.56□□□□□ -1.36
PDPN-212ENST00000621990 TEX49A0A1B0GTD5 131 aa6.56□□□□□ -1.36
PDPN-212ENST00000621990 DEFB121Q5J5C9 76 aa6.56□□□□□ -1.36
PDPN-212ENST00000621990 FAM222AQ5U5X8 452 aa6.56□□□□□ -1.36
PDPN-212ENST00000621990 MT-ATP8P03928 68 aa6.55□□□□□ -1.36
PDPN-212ENST00000621990 UBE2WQ96B02 151 aa6.55□□□□□ -1.36
PDPN-212ENST00000621990 IBA57-AS1B1ANH7 110 aa6.55□□□□□ -1.36
PDPN-212ENST00000621990 NBEAL2Q6ZNJ1 2754 aa6.54□□□□□ -1.36
PDPN-212ENST00000621990 LINC01561Q8N1V8 128 aa6.54□□□□□ -1.36
PDPN-212ENST00000621990 HECTD1Q9ULT8 2610 aa6.54□□□□□ -1.36
PDPN-212ENST00000621990 TRAV13-2A0A0B4J235 113 aa6.54□□□□□ -1.36
PDPN-212ENST00000621990 INAFM1C9JVW0 142 aa6.54□□□□□ -1.36
PDPN-212ENST00000621990 MIR7-3HGQ8N6C7 128 aa6.54□□□□□ -1.36
PDPN-212ENST00000621990 IGKV3OR2-268A0A0C4DH90 116 aa6.53□□□□□ -1.36
PDPN-212ENST00000621990 CITED1Q99966 193 aa6.53□□□□□ -1.36
PDPN-212ENST00000621990 IGKV2-28A0A075B6P5 120 aa6.53□□□□□ -1.36
PDPN-212ENST00000621990 IGKV2D-28P01615 120 aa6.53□□□□□ -1.36
PDPN-212ENST00000621990 RPL28P46779 137 aaKnown RBP6.53□□□□□ -1.36
PDPN-212ENST00000621990 APOC4P55056 127 aa6.53□□□□□ -1.36
PDPN-212ENST00000621990 TRACP01848 142 aa6.52□□□□□ -1.37
PDPN-212ENST00000621990 TOMM7Q9P0U1 55 aa6.52□□□□□ -1.37
PDPN-212ENST00000621990 FAM240AA0A1B0GVK7 77 aa6.52□□□□□ -1.37
PDPN-212ENST00000621990 LINC00337Q8N6G1 96 aa6.52□□□□□ -1.37
PDPN-212ENST00000621990 SND1-IT1Q9HBX3 110 aa6.52□□□□□ -1.37
PDPN-212ENST00000621990 FN1P02751 2386 aaKnown RBP6.52□□□□□ -1.37
PDPN-212ENST00000621990 TRAV26-1A0A087WT03 109 aa6.51□□□□□ -1.37
PDPN-212ENST00000621990 PAX4O43316 350 aa6.51□□□□□ -1.37
PDPN-212ENST00000621990 WIPF1O43516 503 aa6.51□□□□□ -1.37
PDPN-212ENST00000621990 SS18Q15532 418 aa6.51□□□□□ -1.37
PDPN-212ENST00000621990 C5orf38Q86SI9 138 aa6.51□□□□□ -1.37
PDPN-212ENST00000621990 Q8IZM0 81 aa6.51□□□□□ -1.37
PDPN-212ENST00000621990 TRRAPQ9Y4A5 3859 aa6.51□□□□□ -1.37
PDPN-212ENST00000621990 CCL18P55774 89 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms