RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 Q6ZTI0 123 aa13.93□□□□□ -0.18
LAPTM4B-204ENST00000619747 TEP1Q99973 2627 aaKnown RBP13.93□□□□□ -0.18
LAPTM4B-204ENST00000619747 ZNRF2Q8NHG8 242 aa13.92□□□□□ -0.18
LAPTM4B-204ENST00000619747 SPATA3Q8NHX4 192 aa13.92□□□□□ -0.18
LAPTM4B-204ENST00000619747 LINC01600Q96MT4 127 aa13.92□□□□□ -0.18
LAPTM4B-204ENST00000619747 A0A0B4J2C4 111 aa13.92□□□□□ -0.18
LAPTM4B-204ENST00000619747 J3QQQ9 107 aa13.92□□□□□ -0.18
LAPTM4B-204ENST00000619747 GIG44P09565 113 aaPredicted RBP13.92□□□□□ -0.18
LAPTM4B-204ENST00000619747 FAM240AA0A1B0GVK7 77 aa13.91□□□□□ -0.18
LAPTM4B-204ENST00000619747 LGALS3P17931 250 aaKnown RBP13.91□□□□□ -0.18
LAPTM4B-204ENST00000619747 TIMM17AQ99595 171 aa13.91□□□□□ -0.18
LAPTM4B-204ENST00000619747 NOP10Q9NPE3 64 aaKnown RBP13.91□□□□□ -0.18
LAPTM4B-204ENST00000619747 IGHV3-64A0A075B6Q5 118 aa13.9□□□□□ -0.18
LAPTM4B-204ENST00000619747 GAGE2AQ6NT46 116 aa13.9□□□□□ -0.18
LAPTM4B-204ENST00000619747 CLEC2BQ92478 149 aa13.9□□□□□ -0.18
LAPTM4B-204ENST00000619747 TMEM141Q96I45 108 aa13.9□□□□□ -0.18
LAPTM4B-204ENST00000619747 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.89□□□□□ -0.19
LAPTM4B-204ENST00000619747 IGKV2-29A2NJV5 120 aaPredicted RBP13.89□□□□□ -0.19
LAPTM4B-204ENST00000619747 RHOHQ15669 191 aa13.89□□□□□ -0.19
LAPTM4B-204ENST00000619747 C19orf73Q9NVV2 129 aa13.89□□□□□ -0.19
LAPTM4B-204ENST00000619747 TRBV30A0A0K0K1B3 111 aa13.88□□□□□ -0.19
LAPTM4B-204ENST00000619747 F5H768 121 aa13.88□□□□□ -0.19
LAPTM4B-204ENST00000619747 SMCR5Q8TEV8 140 aa13.88□□□□□ -0.19
LAPTM4B-204ENST00000619747 KIR2DL5BQ8NHK3 375 aa13.87□□□□□ -0.19
LAPTM4B-204ENST00000619747 CYSTM1Q9H1C7 97 aa13.87□□□□□ -0.19
LAPTM4B-204ENST00000619747 A0A0J9YXV3 536 aa13.87□□□□□ -0.19
LAPTM4B-204ENST00000619747 H3BT86 120 aa13.87□□□□□ -0.19
LAPTM4B-204ENST00000619747 BEAN1Q3B7T3 259 aa13.87□□□□□ -0.19
LAPTM4B-204ENST00000619747 IGLV4-3A0A075B6K6 122 aa13.86□□□□□ -0.19
LAPTM4B-204ENST00000619747 hADV29S1A0JD25 119 aa13.86□□□□□ -0.19
LAPTM4B-204ENST00000619747 C4orf26Q17RF5 130 aa13.86□□□□□ -0.19
LAPTM4B-204ENST00000619747 IMUPQ9GZP8 106 aa13.86□□□□□ -0.19
LAPTM4B-204ENST00000619747 RS1O15537 224 aa13.85□□□□□ -0.19
LAPTM4B-204ENST00000619747 PAPPA-AS1Q5QFB9 102 aa13.85□□□□□ -0.19
LAPTM4B-204ENST00000619747 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.85□□□□□ -0.19
LAPTM4B-204ENST00000619747 LINC00467Q9BRT7 94 aa13.85□□□□□ -0.19
LAPTM4B-204ENST00000619747 TMEM223A0PJW6 202 aa13.84□□□□□ -0.19
LAPTM4B-204ENST00000619747 COX7CP15954 63 aa13.84□□□□□ -0.19
LAPTM4B-204ENST00000619747 RPS28P62857 69 aaKnown RBP13.84□□□□□ -0.19
LAPTM4B-204ENST00000619747 ICOSQ9Y6W8 199 aa13.84□□□□□ -0.19
LAPTM4B-204ENST00000619747 DEFB121Q5J5C9 76 aa13.84□□□□□ -0.19
LAPTM4B-204ENST00000619747 TRAV8-3A0A0A6YYJ7 113 aa13.83□□□□□ -0.2
LAPTM4B-204ENST00000619747 HRCT1Q6UXD1 115 aa13.83□□□□□ -0.2
LAPTM4B-204ENST00000619747 FAM104AQ969W3 186 aa13.83□□□□□ -0.2
LAPTM4B-204ENST00000619747 CHCHD7Q9BUK0 85 aa13.82□□□□□ -0.2
LAPTM4B-204ENST00000619747 TRGV2A0A075B6R0 118 aa13.82□□□□□ -0.2
LAPTM4B-204ENST00000619747 PRSS2P07478 247 aa13.82□□□□□ -0.2
LAPTM4B-204ENST00000619747 PIK3CD-AS1Q5SR53 167 aa13.82□□□□□ -0.2
LAPTM4B-204ENST00000619747 LINC00482Q8N8I6 264 aa13.82□□□□□ -0.2
LAPTM4B-204ENST00000619747 C2orf48Q96LS8 159 aa13.81□□□□□ -0.2
LAPTM4B-204ENST00000619747 OXTP01178 125 aa13.8□□□□□ -0.2
LAPTM4B-204ENST00000619747 COX6CP09669 75 aa13.79□□□□□ -0.2
LAPTM4B-204ENST00000619747 CRYGAP11844 174 aa13.79□□□□□ -0.2
LAPTM4B-204ENST00000619747 NPC2P61916 151 aa13.79□□□□□ -0.2
LAPTM4B-204ENST00000619747 IL17DQ8TAD2 202 aa13.79□□□□□ -0.2
LAPTM4B-204ENST00000619747 PLAC8L1A1L4L8 177 aa13.79□□□□□ -0.2
LAPTM4B-204ENST00000619747 CSNK1G2-AS1Q8NCQ2 148 aa13.79□□□□□ -0.2
LAPTM4B-204ENST00000619747 DPH3Q96FX2 82 aa13.79□□□□□ -0.2
LAPTM4B-204ENST00000619747 CMC4P56277 68 aaPredicted RBP13.78□□□□□ -0.2
LAPTM4B-204ENST00000619747 DSCR8Q96T75 97 aa13.78□□□□□ -0.2
LAPTM4B-204ENST00000619747 LOC100131303A0A0U1RQF7 123 aa13.78□□□□□ -0.2
LAPTM4B-204ENST00000619747 LST1O00453 97 aa13.77□□□□□ -0.2
LAPTM4B-204ENST00000619747 LINC00643Q86TS7 51 aa13.77□□□□□ -0.2
LAPTM4B-204ENST00000619747 TRACP01848 142 aa13.77□□□□□ -0.21
LAPTM4B-204ENST00000619747 UBE2D4Q9Y2X8 147 aa13.77□□□□□ -0.21
LAPTM4B-204ENST00000619747 LEPROTO15243 131 aa13.76□□□□□ -0.21
LAPTM4B-204ENST00000619747 A0A0J9YXY3 114 aa13.75□□□□□ -0.21
LAPTM4B-204ENST00000619747 A8MZ25 164 aa13.75□□□□□ -0.21
LAPTM4B-204ENST00000619747 K7EQD1 137 aa13.75□□□□□ -0.21
LAPTM4B-204ENST00000619747 DEFB130BP0DP73 79 aa13.75□□□□□ -0.21
LAPTM4B-204ENST00000619747 DEFB130AP0DP74 79 aa13.75□□□□□ -0.21
LAPTM4B-204ENST00000619747 DGAT2L7PQ6IED9 249 aa13.75□□□□□ -0.21
LAPTM4B-204ENST00000619747 ACYP1P07311 99 aa13.75□□□□□ -0.21
LAPTM4B-204ENST00000619747 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.75□□□□□ -0.21
LAPTM4B-204ENST00000619747 C16orf74Q96GX8 76 aa13.75□□□□□ -0.21
LAPTM4B-204ENST00000619747 RPL36AP83881 106 aaKnown RBP13.74□□□□□ -0.21
LAPTM4B-204ENST00000619747 RPL36ALQ969Q0 106 aaKnown RBP13.74□□□□□ -0.21
LAPTM4B-204ENST00000619747 PYGO1Q9Y3Y4 419 aa13.74□□□□□ -0.21
LAPTM4B-204ENST00000619747 STAB1Q9NY15 2570 aa13.74□□□□□ -0.21
LAPTM4B-204ENST00000619747 ATP5G1P05496 136 aa13.74□□□□□ -0.21
LAPTM4B-204ENST00000619747 DAZ2Q13117 558 aaKnown RBP13.73□□□□□ -0.21
LAPTM4B-204ENST00000619747 Q5XG85 94 aa13.72□□□□□ -0.21
LAPTM4B-204ENST00000619747 NTM-AS1Q6ZSK4 140 aa13.72□□□□□ -0.21
LAPTM4B-204ENST00000619747 TRGV4A0A0C4DH28 118 aa13.71□□□□□ -0.21
LAPTM4B-204ENST00000619747 ADAMTSL4-AS1Q5T5F5 129 aa13.71□□□□□ -0.21
LAPTM4B-204ENST00000619747 C5orf38Q86SI9 138 aa13.71□□□□□ -0.21
LAPTM4B-204ENST00000619747 DEFB4AO15263 64 aa13.7□□□□□ -0.22
LAPTM4B-204ENST00000619747 SPANXDQ9BXN6 97 aa13.7□□□□□ -0.22
LAPTM4B-204ENST00000619747 LITAFQ99732 161 aa13.69□□□□□ -0.22
LAPTM4B-204ENST00000619747 MRPS36P82909 103 aaKnown RBP13.69□□□□□ -0.22
LAPTM4B-204ENST00000619747 TRAV13-1A0A0B4J241 112 aa13.68□□□□□ -0.22
LAPTM4B-204ENST00000619747 IGHV3-30-3P0DP02 117 aa13.68□□□□□ -0.22
LAPTM4B-204ENST00000619747 TIMM21Q9BVV7 248 aa13.68□□□□□ -0.22
LAPTM4B-204ENST00000619747 MAST4O15021 2626 aa13.68□□□□□ -0.22
LAPTM4B-204ENST00000619747 ATOX1O00244 68 aa13.67□□□□□ -0.22
LAPTM4B-204ENST00000619747 TMEM258P61165 79 aa13.67□□□□□ -0.22
LAPTM4B-204ENST00000619747 SPANXCQ9NY87 97 aa13.67□□□□□ -0.22
LAPTM4B-204ENST00000619747 PKD1L1Q8TDX9 2849 aa13.67□□□□□ -0.22
LAPTM4B-204ENST00000619747 CDKN2A-AS1Q9UH64 79 aa13.66□□□□□ -0.22
LAPTM4B-204ENST00000619747 TRBV10-1A0A0K0K1A3 114 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms