RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 LITAFQ99732 161 aa5.13□□□□□ -1.59
SPIDR-228ENST00000588781 CDC42SE2Q9NRR3 84 aa5.13□□□□□ -1.59
SPIDR-228ENST00000588781 CDKN2A-AS1Q9UH64 79 aa5.13□□□□□ -1.59
SPIDR-228ENST00000588781 C9JAW5 83 aa5.12□□□□□ -1.59
SPIDR-228ENST00000588781 H7C2G1 150 aa5.12□□□□□ -1.59
SPIDR-228ENST00000588781 GAGE7O76087 117 aa5.12□□□□□ -1.59
SPIDR-228ENST00000588781 PRM2P04554 102 aa5.12□□□□□ -1.59
SPIDR-228ENST00000588781 GAGE12FP0CL80 117 aa5.12□□□□□ -1.59
SPIDR-228ENST00000588781 GAGE12GP0CL81 117 aa5.12□□□□□ -1.59
SPIDR-228ENST00000588781 GAGE12IP0CL82 117 aa5.12□□□□□ -1.59
SPIDR-228ENST00000588781 RPL35AP18077 110 aaKnown RBP5.12□□□□□ -1.59
SPIDR-228ENST00000588781 RNASE13Q5GAN3 156 aaKnown RBP5.12□□□□□ -1.59
SPIDR-228ENST00000588781 MEIG1Q5JSS6 88 aa5.12□□□□□ -1.59
SPIDR-228ENST00000588781 LINC00242Q5T6M2 205 aa5.12□□□□□ -1.59
SPIDR-228ENST00000588781 ANKRD29Q8N6D5 301 aa5.12□□□□□ -1.59
SPIDR-228ENST00000588781 KIR2DL5BQ8NHK3 375 aa5.12□□□□□ -1.59
SPIDR-228ENST00000588781 TLN2Q9Y4G6 2542 aa5.12□□□□□ -1.59
SPIDR-228ENST00000588781 PKD1L1Q8TDX9 2849 aa5.11□□□□□ -1.59
SPIDR-228ENST00000588781 TRAV13-1A0A0B4J241 112 aa5.11□□□□□ -1.59
SPIDR-228ENST00000588781 WIPF1O43516 503 aa5.11□□□□□ -1.59
SPIDR-228ENST00000588781 RPL13AP40429 203 aaKnown RBP5.11□□□□□ -1.59
SPIDR-228ENST00000588781 SMCPP49901 116 aaPredicted RBP5.11□□□□□ -1.59
SPIDR-228ENST00000588781 KRTAP1-1Q07627 177 aa5.11□□□□□ -1.59
SPIDR-228ENST00000588781 Q9H8V8 135 aa5.11□□□□□ -1.59
SPIDR-228ENST00000588781 TRAV13-2A0A0B4J235 113 aa5.1□□□□□ -1.59
SPIDR-228ENST00000588781 A0A1B0GV72 72 aa5.1□□□□□ -1.59
SPIDR-228ENST00000588781 SMIM1B2RUZ4 78 aa5.1□□□□□ -1.59
SPIDR-228ENST00000588781 TRIAP1O43715 76 aa5.1□□□□□ -1.59
SPIDR-228ENST00000588781 TGP01266 2768 aa5.1□□□□□ -1.59
SPIDR-228ENST00000588781 C9orf66Q5T8R8 295 aa5.1□□□□□ -1.59
SPIDR-228ENST00000588781 FAM222AQ5U5X8 452 aa5.1□□□□□ -1.59
SPIDR-228ENST00000588781 LINC01561Q8N1V8 128 aa5.1□□□□□ -1.59
SPIDR-228ENST00000588781 LINC00308Q8TCZ7 52 aa5.1□□□□□ -1.59
SPIDR-228ENST00000588781 C19orf73Q9NVV2 129 aa5.1□□□□□ -1.59
SPIDR-228ENST00000588781 NACAE9PAV3 2078 aa5.09□□□□□ -1.59
SPIDR-228ENST00000588781 TRAV26-1A0A087WT03 109 aa5.09□□□□□ -1.59
SPIDR-228ENST00000588781 TRBV6-8A0A0A6YYG3 113 aa5.09□□□□□ -1.59
SPIDR-228ENST00000588781 LYRM9A8MSI8 78 aa5.09□□□□□ -1.59
SPIDR-228ENST00000588781 LST1O00453 97 aa5.09□□□□□ -1.59
SPIDR-228ENST00000588781 LY6G6DO95868 133 aa5.09□□□□□ -1.59
SPIDR-228ENST00000588781 GIG44P09565 113 aaPredicted RBP5.09□□□□□ -1.59
SPIDR-228ENST00000588781 MRPL23Q16540 153 aaKnown RBP5.09□□□□□ -1.59
SPIDR-228ENST00000588781 ADAMTSL4-AS1Q5T5F5 129 aa5.09□□□□□ -1.59
SPIDR-228ENST00000588781 C2orf82Q6UX34 121 aa5.09□□□□□ -1.59
SPIDR-228ENST00000588781 NTM-AS1Q6ZSK4 140 aa5.09□□□□□ -1.59
SPIDR-228ENST00000588781 CSNK1G2-AS1Q8NCQ2 148 aa5.09□□□□□ -1.59
SPIDR-228ENST00000588781 COX7B2Q8TF08 81 aa5.09□□□□□ -1.59
SPIDR-228ENST00000588781 UBE2WQ96B02 151 aa5.09□□□□□ -1.59
SPIDR-228ENST00000588781 CARD19Q96LW7 228 aa5.09□□□□□ -1.59
SPIDR-228ENST00000588781 CHCHD5Q9BSY4 110 aa5.09□□□□□ -1.59
SPIDR-228ENST00000588781 HIVEP2P31629 2446 aa5.09□□□□□ -1.59
SPIDR-228ENST00000588781 TRAV8-4A0A0B4J246 113 aa5.08□□□□□ -1.6
SPIDR-228ENST00000588781 PLAC8L1A1L4L8 177 aa5.08□□□□□ -1.6
SPIDR-228ENST00000588781 COX7A2LO14548 114 aa5.08□□□□□ -1.6
SPIDR-228ENST00000588781 LINC00694P0DN24 101 aa5.08□□□□□ -1.6
SPIDR-228ENST00000588781 APOC4P55056 127 aa5.08□□□□□ -1.6
SPIDR-228ENST00000588781 COX6A2Q02221 97 aa5.08□□□□□ -1.6
SPIDR-228ENST00000588781 FHL2Q14192 279 aa5.08□□□□□ -1.6
SPIDR-228ENST00000588781 SS18Q15532 418 aa5.08□□□□□ -1.6
SPIDR-228ENST00000588781 ZNF625Q96I27 306 aaPredicted RBP5.08□□□□□ -1.6
SPIDR-228ENST00000588781 Q9UF83 564 aa5.08□□□□□ -1.6
SPIDR-228ENST00000588781 IBA57-AS1B1ANH7 110 aa5.07□□□□□ -1.6
SPIDR-228ENST00000588781 F5H768 121 aa5.07□□□□□ -1.6
SPIDR-228ENST00000588781 EIF4EBP3O60516 100 aaPredicted RBP5.07□□□□□ -1.6
SPIDR-228ENST00000588781 TRACP01848 142 aa5.07□□□□□ -1.6
SPIDR-228ENST00000588781 CRPP02741 224 aa5.07□□□□□ -1.6
SPIDR-228ENST00000588781 GAGE6Q13070 117 aa5.07□□□□□ -1.6
SPIDR-228ENST00000588781 LINC00612Q8N6U2 182 aa5.07□□□□□ -1.6
SPIDR-228ENST00000588781 LINC00482Q8N8I6 264 aa5.07□□□□□ -1.6
SPIDR-228ENST00000588781 NTN5Q8WTR8 489 aaPredicted RBP5.07□□□□□ -1.6
SPIDR-228ENST00000588781 PRO0255Q9UI72 69 aa5.07□□□□□ -1.6
SPIDR-228ENST00000588781 SONP18583 2426 aaKnown RBP5.06□□□□□ -1.6
SPIDR-228ENST00000588781 A0A087WZ39 114 aa5.06□□□□□ -1.6
SPIDR-228ENST00000588781 A0A1B0GUV1 79 aa5.06□□□□□ -1.6
SPIDR-228ENST00000588781 FAM240AA0A1B0GVK7 77 aa5.06□□□□□ -1.6
SPIDR-228ENST00000588781 SNCGO76070 127 aa5.06□□□□□ -1.6
SPIDR-228ENST00000588781 ACYP1P07311 99 aa5.06□□□□□ -1.6
SPIDR-228ENST00000588781 NPC2P61916 151 aa5.06□□□□□ -1.6
SPIDR-228ENST00000588781 SORL1Q92673 2214 aa5.05□□□□□ -1.6
SPIDR-228ENST00000588781 A8MZ25 164 aa5.05□□□□□ -1.6
SPIDR-228ENST00000588781 INAFM1C9JVW0 142 aa5.05□□□□□ -1.6
SPIDR-228ENST00000588781 CRLF1O75462 422 aa5.05□□□□□ -1.6
SPIDR-228ENST00000588781 GYPEP15421 78 aa5.05□□□□□ -1.6
SPIDR-228ENST00000588781 CXCL5P42830 114 aa5.05□□□□□ -1.6
SPIDR-228ENST00000588781 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.05□□□□□ -1.6
SPIDR-228ENST00000588781 CDIP1Q9H305 208 aa5.05□□□□□ -1.6
SPIDR-228ENST00000588781 H0YGX0 51 aa5.04□□□□□ -1.6
SPIDR-228ENST00000588781 DEFB130BP0DP73 79 aa5.04□□□□□ -1.6
SPIDR-228ENST00000588781 DEFB130AP0DP74 79 aa5.04□□□□□ -1.6
SPIDR-228ENST00000588781 LINC00158P58513 81 aa5.04□□□□□ -1.6
SPIDR-228ENST00000588781 DEFB121Q5J5C9 76 aa5.04□□□□□ -1.6
SPIDR-228ENST00000588781 HIST2H2BDQ6DRA6 164 aa5.04□□□□□ -1.6
SPIDR-228ENST00000588781 SHISA2Q6UWI4 295 aa5.04□□□□□ -1.6
SPIDR-228ENST00000588781 MUC7Q8TAX7 377 aa5.04□□□□□ -1.6
SPIDR-228ENST00000588781 WFDC10AQ9H1F0 79 aa5.04□□□□□ -1.6
SPIDR-228ENST00000588781 TOMM7Q9P0U1 55 aa5.04□□□□□ -1.6
SPIDR-228ENST00000588781 IGHV3OR16-9A0A0B4J2B5 98 aa5.03□□□□□ -1.6
SPIDR-228ENST00000588781 LOC100131303A0A0U1RQF7 123 aa5.03□□□□□ -1.6
SPIDR-228ENST00000588781 LINC00959A0A1B0GUT2 108 aa5.03□□□□□ -1.6
SPIDR-228ENST00000588781 PAX4O43316 350 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms