RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 HINT1P49773 126 aaPredicted RBP7.2□□□□□ -1.26
LIG3-203ENST00000585370 TCTAP57738 103 aa7.2□□□□□ -1.26
LIG3-203ENST00000585370 MPV17L2Q567V2 206 aa7.2□□□□□ -1.26
LIG3-203ENST00000585370 LELP1Q5T871 98 aa7.2□□□□□ -1.26
LIG3-203ENST00000585370 LINC00469Q8N7U9 141 aa7.2□□□□□ -1.26
LIG3-203ENST00000585370 MAPKAPK5-AS1Q8N8E1 139 aa7.2□□□□□ -1.26
LIG3-203ENST00000585370 C11orf45Q8TAV5 145 aa7.2□□□□□ -1.26
LIG3-203ENST00000585370 FRAS1Q86XX4 4008 aa7.2□□□□□ -1.26
LIG3-203ENST00000585370 ALMS1Q8TCU4 4167 aa7.19□□□□□ -1.26
LIG3-203ENST00000585370 IGHV1-58A0A0C4DH39 117 aa7.19□□□□□ -1.26
LIG3-203ENST00000585370 A0A0J9YWU9 116 aa7.19□□□□□ -1.26
LIG3-203ENST00000585370 TMEM262E9PQX1 116 aa7.19□□□□□ -1.26
LIG3-203ENST00000585370 BATFQ16520 125 aa7.19□□□□□ -1.26
LIG3-203ENST00000585370 RNASE13Q5GAN3 156 aaKnown RBP7.19□□□□□ -1.26
LIG3-203ENST00000585370 BVES-AS1Q5T3Y7 98 aa7.19□□□□□ -1.26
LIG3-203ENST00000585370 LINC00242Q5T6M2 205 aa7.19□□□□□ -1.26
LIG3-203ENST00000585370 KMT2AQ03164 3969 aa7.18□□□□□ -1.26
LIG3-203ENST00000585370 A0A096LPF7 62 aa7.18□□□□□ -1.26
LIG3-203ENST00000585370 TRAV13-1A0A0B4J241 112 aa7.18□□□□□ -1.26
LIG3-203ENST00000585370 A6NDN8 102 aa7.18□□□□□ -1.26
LIG3-203ENST00000585370 ORAOV1Q8WV07 137 aa7.18□□□□□ -1.26
LIG3-203ENST00000585370 IGHV3-30-3P0DP02 117 aa7.17□□□□□ -1.26
LIG3-203ENST00000585370 RBX1P62877 108 aa7.17□□□□□ -1.26
LIG3-203ENST00000585370 SCGB1D4Q6XE38 83 aa7.17□□□□□ -1.26
LIG3-203ENST00000585370 TTTY13Q9BZ97 58 aa7.17□□□□□ -1.26
LIG3-203ENST00000585370 CDKN2A-AS1Q9UH64 79 aa7.17□□□□□ -1.26
LIG3-203ENST00000585370 IGLV4-60A0A075B6I1 120 aa7.16□□□□□ -1.26
LIG3-203ENST00000585370 DEFB131BA0A096LNP1 70 aa7.16□□□□□ -1.26
LIG3-203ENST00000585370 TRAV10A0A0B4J240 114 aa7.16□□□□□ -1.26
LIG3-203ENST00000585370 SS18Q15532 418 aa7.16□□□□□ -1.26
LIG3-203ENST00000585370 LYPD5Q6UWN5 251 aa7.16□□□□□ -1.26
LIG3-203ENST00000585370 Q6ZTC4 211 aa7.16□□□□□ -1.26
LIG3-203ENST00000585370 LINC01561Q8N1V8 128 aa7.16□□□□□ -1.26
LIG3-203ENST00000585370 HIST1H4GQ99525 98 aa7.16□□□□□ -1.26
LIG3-203ENST00000585370 TM2D2Q9BX73 214 aa7.16□□□□□ -1.26
LIG3-203ENST00000585370 SPANXB1Q9NS25 103 aaPredicted RBP7.16□□□□□ -1.26
LIG3-203ENST00000585370 TP73-AS1Q9UF72 201 aa7.16□□□□□ -1.26
LIG3-203ENST00000585370 IGLV5-39A0A0G2JS06 123 aa7.15□□□□□ -1.26
LIG3-203ENST00000585370 COX6A2Q02221 97 aa7.15□□□□□ -1.26
LIG3-203ENST00000585370 CEND1Q8N111 149 aa7.15□□□□□ -1.26
LIG3-203ENST00000585370 LINC00959A0A1B0GUT2 108 aa7.14□□□□□ -1.27
LIG3-203ENST00000585370 SPINK8P0C7L1 97 aa7.14□□□□□ -1.27
LIG3-203ENST00000585370 TSPEAR-AS2P59090 65 aa7.14□□□□□ -1.27
LIG3-203ENST00000585370 NANOS2P60321 138 aaKnown RBP7.14□□□□□ -1.27
LIG3-203ENST00000585370 SRSF9Q13242 221 aaKnown RBP eCLIP7.14□□□□□ -1.27
LIG3-203ENST00000585370 C15orf53Q8NAA6 179 aa7.14□□□□□ -1.27
LIG3-203ENST00000585370 NDUFA12Q9UI09 145 aa7.14□□□□□ -1.27
LIG3-203ENST00000585370 TMEM238LA0A1B0GVL6 79 aa7.13□□□□□ -1.27
LIG3-203ENST00000585370 A6NJY4 79 aa7.13□□□□□ -1.27
LIG3-203ENST00000585370 GCSHP23434 173 aa7.13□□□□□ -1.27
LIG3-203ENST00000585370 SFTA2Q6UW10 78 aa7.13□□□□□ -1.27
LIG3-203ENST00000585370 Q6ZVH6 145 aa7.13□□□□□ -1.27
LIG3-203ENST00000585370 IGHV3-64A0A075B6Q5 118 aa7.12□□□□□ -1.27
LIG3-203ENST00000585370 A0A087WZ39 114 aa7.12□□□□□ -1.27
LIG3-203ENST00000585370 TRAV8-3A0A0A6YYJ7 113 aa7.12□□□□□ -1.27
LIG3-203ENST00000585370 IGHV3OR16-9A0A0B4J2B5 98 aa7.12□□□□□ -1.27
LIG3-203ENST00000585370 SMIM1B2RUZ4 78 aa7.12□□□□□ -1.27
LIG3-203ENST00000585370 TMEM238C9JI98 176 aa7.12□□□□□ -1.27
LIG3-203ENST00000585370 NDUFA1O15239 70 aa7.12□□□□□ -1.27
LIG3-203ENST00000585370 TIMM17BO60830 172 aa7.12□□□□□ -1.27
LIG3-203ENST00000585370 PTTG1IPP53801 180 aa7.12□□□□□ -1.27
LIG3-203ENST00000585370 HERV-K104P63124 156 aa7.12□□□□□ -1.27
LIG3-203ENST00000585370 CIRBPQ14011 172 aaKnown RBP7.12□□□□□ -1.27
LIG3-203ENST00000585370 KRTAP3-3Q9BYR6 98 aa7.12□□□□□ -1.27
LIG3-203ENST00000585370 KRTAP3-2Q9BYR7 98 aa7.12□□□□□ -1.27
LIG3-203ENST00000585370 DNAH10Q8IVF4 4471 aa7.11□□□□□ -1.27
LIG3-203ENST00000585370 ANGP03950 147 aaKnown RBP7.11□□□□□ -1.27
LIG3-203ENST00000585370 SMIM13P0DJ93 91 aa7.11□□□□□ -1.27
LIG3-203ENST00000585370 TRAV8-4A0A0B4J246 113 aa7.1□□□□□ -1.27
LIG3-203ENST00000585370 IGKV3OR2-268A0A0C4DH90 116 aa7.1□□□□□ -1.27
LIG3-203ENST00000585370 A0A0J9YXY3 114 aa7.1□□□□□ -1.27
LIG3-203ENST00000585370 A0A1B0GV90 55 aa7.1□□□□□ -1.27
LIG3-203ENST00000585370 REG3AQ06141 175 aa7.1□□□□□ -1.27
LIG3-203ENST00000585370 CD164L2Q6UWJ8 174 aa7.1□□□□□ -1.27
LIG3-203ENST00000585370 LINC00269Q8N2A0 174 aa7.1□□□□□ -1.27
LIG3-203ENST00000585370 VPS13DQ5THJ4 4388 aa7.09□□□□□ -1.27
LIG3-203ENST00000585370 C10orf126Q8N4M7 172 aa7.09□□□□□ -1.27
LIG3-203ENST00000585370 COPS9Q8WXC6 57 aa7.09□□□□□ -1.27
LIG3-203ENST00000585370 PRR34Q9NV39 138 aa7.09□□□□□ -1.27
LIG3-203ENST00000585370 COX11Q9Y6N1 276 aa7.09□□□□□ -1.27
LIG3-203ENST00000585370 TAX1BP3O14907 124 aa7.08□□□□□ -1.28
LIG3-203ENST00000585370 IGHV3-30P01768 117 aa7.08□□□□□ -1.28
LIG3-203ENST00000585370 IGHV3-30-5P0DP03 117 aa7.08□□□□□ -1.28
LIG3-203ENST00000585370 IFITM1P13164 125 aa7.08□□□□□ -1.28
LIG3-203ENST00000585370 FXYD2P54710 66 aa7.08□□□□□ -1.28
LIG3-203ENST00000585370 RPL24P83731 157 aaKnown RBP7.08□□□□□ -1.28
LIG3-203ENST00000585370 ESRGQ1W209 222 aa7.08□□□□□ -1.28
LIG3-203ENST00000585370 COX7B2Q8TF08 81 aa7.08□□□□□ -1.28
LIG3-203ENST00000585370 LINC00476Q8WZB0 136 aa7.08□□□□□ -1.28
LIG3-203ENST00000585370 SPANXDQ9BXN6 97 aa7.08□□□□□ -1.28
LIG3-203ENST00000585370 SPANXCQ9NY87 97 aa7.08□□□□□ -1.28
LIG3-203ENST00000585370 A0A1B0GWB2 263 aa7.07□□□□□ -1.28
LIG3-203ENST00000585370 COX7A2LO14548 114 aa7.07□□□□□ -1.28
LIG3-203ENST00000585370 CHCHD10Q8WYQ3 142 aaPredicted RBP7.07□□□□□ -1.28
LIG3-203ENST00000585370 ZNF625Q96I27 306 aaPredicted RBP7.07□□□□□ -1.28
LIG3-203ENST00000585370 PPDPFQ9H3Y8 114 aa7.07□□□□□ -1.28
LIG3-203ENST00000585370 Q9H8V8 135 aa7.07□□□□□ -1.28
LIG3-203ENST00000585370 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.06□□□□□ -1.28
LIG3-203ENST00000585370 C9orf118A6NHY6 69 aa7.06□□□□□ -1.28
LIG3-203ENST00000585370 APOMO95445 188 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 151.6 ms