RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-222	ENST00000584377	COX6C	P09669	75 aa		9.48	□□□□□ -0.89
CSNK1D-222	ENST00000584377	DGAT2L7P	Q6IED9	249 aa		9.48	□□□□□ -0.89
CSNK1D-222	ENST00000584377		Q6ZTI0	123 aa		9.48	□□□□□ -0.89
CSNK1D-222	ENST00000584377	LINC00526	Q96FQ7	95 aa		9.48	□□□□□ -0.89
CSNK1D-222	ENST00000584377	VSIG2	Q96IQ7	327 aa		9.48	□□□□□ -0.89
CSNK1D-222	ENST00000584377	RNASE1	P07998	156 aa	Known RBP	9.47	□□□□□ -0.89
CSNK1D-222	ENST00000584377	NDUFA12	Q9UI09	145 aa		9.47	□□□□□ -0.89
CSNK1D-222	ENST00000584377	SETX	Q7Z333	2677 aa	Known RBP	9.47	□□□□□ -0.89
CSNK1D-222	ENST00000584377	PDZD2	O15018	2839 aa		9.47	□□□□□ -0.89
CSNK1D-222	ENST00000584377	C16orf95	Q9H693	158 aa		9.46	□□□□□ -0.89
CSNK1D-222	ENST00000584377	ITPR2	Q14571	2701 aa		9.46	□□□□□ -0.9
CSNK1D-222	ENST00000584377		A0A1B0GX51	115 aa		9.46	□□□□□ -0.9
CSNK1D-222	ENST00000584377		A8MZ25	164 aa		9.46	□□□□□ -0.9
CSNK1D-222	ENST00000584377	LITAF	Q99732	161 aa		9.46	□□□□□ -0.9
CSNK1D-222	ENST00000584377	LST1	O00453	97 aa		9.45	□□□□□ -0.9
CSNK1D-222	ENST00000584377	PRSS2	P07478	247 aa		9.45	□□□□□ -0.9
CSNK1D-222	ENST00000584377	RPL36A	P83881	106 aa	Known RBP	9.45	□□□□□ -0.9
CSNK1D-222	ENST00000584377	RPL36AL	Q969Q0	106 aa	Known RBP	9.45	□□□□□ -0.9
CSNK1D-222	ENST00000584377		K7EQD1	137 aa		9.45	□□□□□ -0.9
CSNK1D-222	ENST00000584377	CMC4	P56277	68 aa	Predicted RBP	9.45	□□□□□ -0.9
CSNK1D-222	ENST00000584377	WFDC10A	Q9H1F0	79 aa		9.45	□□□□□ -0.9
CSNK1D-222	ENST00000584377	TRBV10-1	A0A0K0K1A3	114 aa		9.45	□□□□□ -0.9
CSNK1D-222	ENST00000584377	SPANXD	Q9BXN6	97 aa		9.45	□□□□□ -0.9
CSNK1D-222	ENST00000584377	NOP10	Q9NPE3	64 aa	Known RBP	9.45	□□□□□ -0.9
CSNK1D-222	ENST00000584377	CDKN2A-AS1	Q9UH64	79 aa		9.45	□□□□□ -0.9
CSNK1D-222	ENST00000584377	C2CD3	Q4AC94	2353 aa		9.44	□□□□□ -0.9
CSNK1D-222	ENST00000584377	ACYP1	P07311	99 aa		9.44	□□□□□ -0.9
CSNK1D-222	ENST00000584377	GIG44	P09565	113 aa	Predicted RBP	9.44	□□□□□ -0.9
CSNK1D-222	ENST00000584377	SMCR5	Q8TEV8	140 aa		9.44	□□□□□ -0.9
CSNK1D-222	ENST00000584377	WIPF1	O43516	503 aa		9.43	□□□□□ -0.9
CSNK1D-222	ENST00000584377	TIRAP	P58753	221 aa		9.43	□□□□□ -0.9
CSNK1D-222	ENST00000584377	ADAMTSL4-AS1	Q5T5F5	129 aa		9.43	□□□□□ -0.9
CSNK1D-222	ENST00000584377	IGLV1-51	P01701	117 aa		9.43	□□□□□ -0.9
CSNK1D-222	ENST00000584377	RPL35A	P18077	110 aa	Known RBP	9.43	□□□□□ -0.9
CSNK1D-222	ENST00000584377	DAZ2	Q13117	558 aa	Known RBP	9.43	□□□□□ -0.9
CSNK1D-222	ENST00000584377	DAZ4	Q86SG3	579 aa	Known RBP	9.43	□□□□□ -0.9
CSNK1D-222	ENST00000584377	DAZ3	Q9NR90	486 aa	Known RBP	9.43	□□□□□ -0.9
CSNK1D-222	ENST00000584377	IGLV5-45	A0A087WSX0	123 aa		9.42	□□□□□ -0.9
CSNK1D-222	ENST00000584377	LINC00643	Q86TS7	51 aa		9.42	□□□□□ -0.9
CSNK1D-222	ENST00000584377	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	9.42	□□□□□ -0.9
CSNK1D-222	ENST00000584377	SPANXC	Q9NY87	97 aa		9.42	□□□□□ -0.9
CSNK1D-222	ENST00000584377	NTM-AS1	Q6ZSK4	140 aa		9.42	□□□□□ -0.9
CSNK1D-222	ENST00000584377	HELZ2	Q9BYK8	2649 aa	Known RBP	9.42	□□□□□ -0.9
CSNK1D-222	ENST00000584377	ATP5G1	P05496	136 aa		9.42	□□□□□ -0.9
CSNK1D-222	ENST00000584377	COX7C	P15954	63 aa		9.42	□□□□□ -0.9
CSNK1D-222	ENST00000584377	RPS28	P62857	69 aa	Known RBP	9.42	□□□□□ -0.9
CSNK1D-222	ENST00000584377	MIA	Q16674	131 aa		9.42	□□□□□ -0.9
CSNK1D-222	ENST00000584377	C16orf74	Q96GX8	76 aa		9.42	□□□□□ -0.9
CSNK1D-222	ENST00000584377	COX6A2	Q02221	97 aa		9.41	□□□□□ -0.9
CSNK1D-222	ENST00000584377	GAGE2A	Q6NT46	116 aa		9.41	□□□□□ -0.9
CSNK1D-222	ENST00000584377	OR13C6P	Q8NH95	151 aa		9.41	□□□□□ -0.9
CSNK1D-222	ENST00000584377	C19orf73	Q9NVV2	129 aa		9.41	□□□□□ -0.9
CSNK1D-222	ENST00000584377	UNC79	Q9P2D8	2635 aa		9.41	□□□□□ -0.9
CSNK1D-222	ENST00000584377	LINC00242	Q5T6M2	205 aa		9.41	□□□□□ -0.9
CSNK1D-222	ENST00000584377	TRGV2	A0A075B6R0	118 aa		9.4	□□□□□ -0.9
CSNK1D-222	ENST00000584377	PLAC8L1	A1L4L8	177 aa		9.4	□□□□□ -0.9
CSNK1D-222	ENST00000584377	ANK3	Q12955	4377 aa	Known RBP	9.4	□□□□□ -0.9
CSNK1D-222	ENST00000584377	HILS1	P60008	231 aa		9.4	□□□□□ -0.91
CSNK1D-222	ENST00000584377	NPC2	P61916	151 aa		9.4	□□□□□ -0.91
CSNK1D-222	ENST00000584377	TRAV13-1	A0A0B4J241	112 aa		9.39	□□□□□ -0.91
CSNK1D-222	ENST00000584377	NDUFA1	O15239	70 aa		9.39	□□□□□ -0.91
CSNK1D-222	ENST00000584377	CRYGA	P11844	174 aa		9.39	□□□□□ -0.91
CSNK1D-222	ENST00000584377	C2orf48	Q96LS8	159 aa		9.39	□□□□□ -0.91
CSNK1D-222	ENST00000584377	PLA2G2A	P14555	144 aa		9.38	□□□□□ -0.91
CSNK1D-222	ENST00000584377		J3QKU1	62 aa		9.38	□□□□□ -0.91
CSNK1D-222	ENST00000584377	TIMM17B	O60830	172 aa		9.38	□□□□□ -0.91
CSNK1D-222	ENST00000584377	C5orf38	Q86SI9	138 aa		9.38	□□□□□ -0.91
CSNK1D-222	ENST00000584377	CSNK1G2-AS1	Q8NCQ2	148 aa		9.38	□□□□□ -0.91
CSNK1D-222	ENST00000584377	IGLV5-39	A0A0G2JS06	123 aa		9.38	□□□□□ -0.91
CSNK1D-222	ENST00000584377	CDC42SE2	Q9NRR3	84 aa		9.38	□□□□□ -0.91
CSNK1D-222	ENST00000584377	DAND5	Q8N907	189 aa		9.37	□□□□□ -0.91
CSNK1D-222	ENST00000584377	HIVEP2	P31629	2446 aa		9.37	□□□□□ -0.91
CSNK1D-222	ENST00000584377	hADV29S1	A0JD25	119 aa		9.37	□□□□□ -0.91
CSNK1D-222	ENST00000584377	UBE2L6	O14933	153 aa		9.37	□□□□□ -0.91
CSNK1D-222	ENST00000584377	CXCL5	P42830	114 aa		9.37	□□□□□ -0.91
CSNK1D-222	ENST00000584377	SDIM1	Q6ZPB5	146 aa		9.37	□□□□□ -0.91
CSNK1D-222	ENST00000584377	FAM19A3	Q7Z5A8	133 aa		9.37	□□□□□ -0.91
CSNK1D-222	ENST00000584377	TMEM243	Q9BU79	118 aa		9.36	□□□□□ -0.91
CSNK1D-222	ENST00000584377		Q9H8V8	135 aa		9.36	□□□□□ -0.91
CSNK1D-222	ENST00000584377	LOC100131303	A0A0U1RQF7	123 aa		9.36	□□□□□ -0.91
CSNK1D-222	ENST00000584377	SMIM1	B2RUZ4	78 aa		9.36	□□□□□ -0.91
CSNK1D-222	ENST00000584377	CIRBP	Q14011	172 aa	Known RBP	9.36	□□□□□ -0.91
CSNK1D-222	ENST00000584377	OVOL2	Q9BRP0	275 aa		9.36	□□□□□ -0.91
CSNK1D-222	ENST00000584377	TRGV4	A0A0C4DH28	118 aa		9.35	□□□□□ -0.91
CSNK1D-222	ENST00000584377	TRBV6-4	A0A1B0GX49	114 aa		9.35	□□□□□ -0.91
CSNK1D-222	ENST00000584377	CYSTM1	Q9H1C7	97 aa		9.35	□□□□□ -0.91
CSNK1D-222	ENST00000584377	FASN	P49327	2511 aa	Known RBP	9.35	□□□□□ -0.91
CSNK1D-222	ENST00000584377	ZNF625	Q96I27	306 aa	Predicted RBP	9.34	□□□□□ -0.91
CSNK1D-222	ENST00000584377	SMR3A	Q99954	134 aa		9.34	□□□□□ -0.91
CSNK1D-222	ENST00000584377	TRAC	P01848	142 aa		9.34	□□□□□ -0.92
CSNK1D-222	ENST00000584377	KIR2DL5B	Q8NHK3	375 aa		9.33	□□□□□ -0.92
CSNK1D-222	ENST00000584377	DPH3	Q96FX2	82 aa		9.33	□□□□□ -0.92
CSNK1D-222	ENST00000584377	ATOX1	O00244	68 aa		9.33	□□□□□ -0.92
CSNK1D-222	ENST00000584377	HIST1H4A	P62805	103 aa	Known RBP	9.33	□□□□□ -0.92
CSNK1D-222	ENST00000584377		A0A0U1RRA0	63 aa		9.32	□□□□□ -0.92
CSNK1D-222	ENST00000584377		F5H768	121 aa		9.32	□□□□□ -0.92
CSNK1D-222	ENST00000584377	PF4	P02776	101 aa		9.32	□□□□□ -0.92
CSNK1D-222	ENST00000584377	PRIMA1	Q86XR5	153 aa		9.32	□□□□□ -0.92
CSNK1D-222	ENST00000584377	LINC00308	Q8TCZ7	52 aa		9.31	□□□□□ -0.92
CSNK1D-222	ENST00000584377	KRTAP10-3	P60369	221 aa		9.31	□□□□□ -0.92

Retrieved 100 of 20,778 RNA–protein pairs in 277.5 ms