RNA–Protein interactions for RNA: ENST00000567379.5

VPS9D1-206, Transcript of VPS9 domain containing 1, humanhuman

TSL 5

Gene VPS9D1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-206ENST00000567379 LYPD5Q6UWN5 251 aa7.49□□□□□ -1.21
VPS9D1-206ENST00000567379 SCGB1D4Q6XE38 83 aa7.49□□□□□ -1.21
VPS9D1-206ENST00000567379 B9D2Q9BPU9 175 aa7.49□□□□□ -1.21
VPS9D1-206ENST00000567379 CDKN2A-AS1Q9UH64 79 aa7.49□□□□□ -1.21
VPS9D1-206ENST00000567379 CCL25O15444 150 aa7.48□□□□□ -1.21
VPS9D1-206ENST00000567379 IGHV3-30-3P0DP02 117 aa7.48□□□□□ -1.21
VPS9D1-206ENST00000567379 TSPEAR-AS2P59090 65 aa7.48□□□□□ -1.21
VPS9D1-206ENST00000567379 SS18Q15532 418 aa7.48□□□□□ -1.21
VPS9D1-206ENST00000567379 COL5A1-AS1Q5SY13 56 aa7.48□□□□□ -1.21
VPS9D1-206ENST00000567379 BVES-AS1Q5T3Y7 98 aa7.48□□□□□ -1.21
VPS9D1-206ENST00000567379 TRAV8-3A0A0A6YYJ7 113 aa7.47□□□□□ -1.21
VPS9D1-206ENST00000567379 LINC00959A0A1B0GUT2 108 aa7.47□□□□□ -1.21
VPS9D1-206ENST00000567379 TAL2Q16559 108 aa7.47□□□□□ -1.21
VPS9D1-206ENST00000567379 C15orf53Q8NAA6 179 aa7.47□□□□□ -1.21
VPS9D1-206ENST00000567379 ANGP03950 147 aaKnown RBP7.46□□□□□ -1.22
VPS9D1-206ENST00000567379 ORAOV1Q8WV07 137 aa7.46□□□□□ -1.22
VPS9D1-206ENST00000567379 TENM3Q9P273 2699 aa7.45□□□□□ -1.22
VPS9D1-206ENST00000567379 RYR2Q92736 4967 aa7.45□□□□□ -1.22
VPS9D1-206ENST00000567379 IGLV5-39A0A0G2JS06 123 aa7.45□□□□□ -1.22
VPS9D1-206ENST00000567379 HIST1H4GQ99525 98 aa7.45□□□□□ -1.22
VPS9D1-206ENST00000567379 NDUFA12Q9UI09 145 aa7.45□□□□□ -1.22
VPS9D1-206ENST00000567379 A6NDN8 102 aa7.44□□□□□ -1.22
VPS9D1-206ENST00000567379 SMIM1B2RUZ4 78 aa7.44□□□□□ -1.22
VPS9D1-206ENST00000567379 NHLRC4P0CG21 123 aaPredicted RBP7.44□□□□□ -1.22
VPS9D1-206ENST00000567379 REG3AQ06141 175 aa7.44□□□□□ -1.22
VPS9D1-206ENST00000567379 ZFAND6Q6FIF0 208 aa7.44□□□□□ -1.22
VPS9D1-206ENST00000567379 LINC00269Q8N2A0 174 aa7.44□□□□□ -1.22
VPS9D1-206ENST00000567379 GCSHP23434 173 aa7.43□□□□□ -1.22
VPS9D1-206ENST00000567379 SRSF9Q13242 221 aaKnown RBP eCLIP7.43□□□□□ -1.22
VPS9D1-206ENST00000567379 ESRGQ1W209 222 aa7.43□□□□□ -1.22
VPS9D1-206ENST00000567379 CLPSL2Q6UWE3 100 aa7.43□□□□□ -1.22
VPS9D1-206ENST00000567379 CEND1Q8N111 149 aa7.43□□□□□ -1.22
VPS9D1-206ENST00000567379 SPANXB1Q9NS25 103 aaPredicted RBP7.43□□□□□ -1.22
VPS9D1-206ENST00000567379 A0A087WZ39 114 aa7.42□□□□□ -1.22
VPS9D1-206ENST00000567379 IGHV3OR16-9A0A0B4J2B5 98 aa7.42□□□□□ -1.22
VPS9D1-206ENST00000567379 NDUFA1O15239 70 aa7.42□□□□□ -1.22
VPS9D1-206ENST00000567379 XCL1P47992 114 aa7.42□□□□□ -1.22
VPS9D1-206ENST00000567379 PTTG1IPP53801 180 aa7.42□□□□□ -1.22
VPS9D1-206ENST00000567379 LINC01561Q8N1V8 128 aa7.42□□□□□ -1.22
VPS9D1-206ENST00000567379 Q8N3U1 123 aa7.42□□□□□ -1.22
VPS9D1-206ENST00000567379 TM2D2Q9BX73 214 aa7.42□□□□□ -1.22
VPS9D1-206ENST00000567379 A0A0J9YXY3 114 aa7.41□□□□□ -1.22
VPS9D1-206ENST00000567379 TMEM238C9JI98 176 aa7.41□□□□□ -1.22
VPS9D1-206ENST00000567379 IGHV3-30P01768 117 aa7.41□□□□□ -1.22
VPS9D1-206ENST00000567379 IGHV3-33P01772 117 aa7.41□□□□□ -1.22
VPS9D1-206ENST00000567379 IGHV3-30-5P0DP03 117 aa7.41□□□□□ -1.22
VPS9D1-206ENST00000567379 CD164L2Q6UWJ8 174 aa7.41□□□□□ -1.22
VPS9D1-206ENST00000567379 C5orf38Q86SI9 138 aa7.41□□□□□ -1.22
VPS9D1-206ENST00000567379 CHCHD10Q8WYQ3 142 aaPredicted RBP7.41□□□□□ -1.22
VPS9D1-206ENST00000567379 KLK12Q9UKR0 248 aa7.41□□□□□ -1.22
VPS9D1-206ENST00000567379 A0A1B0GV90 55 aa7.4□□□□□ -1.22
VPS9D1-206ENST00000567379 IGLL5B9A064 214 aa7.4□□□□□ -1.22
VPS9D1-206ENST00000567379 CRPP02741 224 aa7.4□□□□□ -1.22
VPS9D1-206ENST00000567379 WFDC10BQ8IUB3 73 aa7.4□□□□□ -1.22
VPS9D1-206ENST00000567379 C10orf126Q8N4M7 172 aa7.4□□□□□ -1.22
VPS9D1-206ENST00000567379 COX7B2Q8TF08 81 aa7.4□□□□□ -1.22
VPS9D1-206ENST00000567379 TMEM238LA0A1B0GVL6 79 aa7.39□□□□□ -1.23
VPS9D1-206ENST00000567379 A6NJY4 79 aa7.39□□□□□ -1.23
VPS9D1-206ENST00000567379 COX7A2LO14548 114 aa7.39□□□□□ -1.23
VPS9D1-206ENST00000567379 FXYD2P54710 66 aa7.39□□□□□ -1.23
VPS9D1-206ENST00000567379 CCL18P55774 89 aa7.39□□□□□ -1.23
VPS9D1-206ENST00000567379 HERV-K104P63124 156 aa7.39□□□□□ -1.23
VPS9D1-206ENST00000567379 CIRBPQ14011 172 aaKnown RBP7.39□□□□□ -1.23
VPS9D1-206ENST00000567379 Q9H8V8 135 aa7.39□□□□□ -1.23
VPS9D1-206ENST00000567379 PRR34Q9NV39 138 aa7.39□□□□□ -1.23
VPS9D1-206ENST00000567379 TOMM7Q9P0U1 55 aa7.39□□□□□ -1.23
VPS9D1-206ENST00000567379 IGLV10-54A0A075B6I4 117 aa7.38□□□□□ -1.23
VPS9D1-206ENST00000567379 TRAV8-4A0A0B4J246 113 aa7.38□□□□□ -1.23
VPS9D1-206ENST00000567379 TIMM17BO60830 172 aa7.38□□□□□ -1.23
VPS9D1-206ENST00000567379 SMIM13P0DJ93 91 aa7.38□□□□□ -1.23
VPS9D1-206ENST00000567379 LINC01556Q5JQF7 62 aa7.38□□□□□ -1.23
VPS9D1-206ENST00000567379 PRSS2P07478 247 aa7.37□□□□□ -1.23
VPS9D1-206ENST00000567379 MALP21145 153 aa7.37□□□□□ -1.23
VPS9D1-206ENST00000567379 MIAQ16674 131 aa7.37□□□□□ -1.23
VPS9D1-206ENST00000567379 SFTA2Q6UW10 78 aa7.37□□□□□ -1.23
VPS9D1-206ENST00000567379 ENHOQ6UWT2 76 aa7.37□□□□□ -1.23
VPS9D1-206ENST00000567379 Q6ZVH6 145 aa7.37□□□□□ -1.23
VPS9D1-206ENST00000567379 UBE2WQ96B02 151 aa7.37□□□□□ -1.23
VPS9D1-206ENST00000567379 ZNF625Q96I27 306 aaPredicted RBP7.37□□□□□ -1.23
VPS9D1-206ENST00000567379 DYNC2H1Q8NCM8 4307 aaKnown RBP7.36□□□□□ -1.23
VPS9D1-206ENST00000567379 GAGE12HA6NDE8 117 aa7.36□□□□□ -1.23
VPS9D1-206ENST00000567379 TAX1BP3O14907 124 aa7.36□□□□□ -1.23
VPS9D1-206ENST00000567379 APOMO95445 188 aa7.36□□□□□ -1.23
VPS9D1-206ENST00000567379 RPL24P83731 157 aaKnown RBP7.36□□□□□ -1.23
VPS9D1-206ENST00000567379 FOXI1Q12951 378 aa7.36□□□□□ -1.23
VPS9D1-206ENST00000567379 C6orf226Q5I0X4 101 aa7.36□□□□□ -1.23
VPS9D1-206ENST00000567379 MEIG1Q5JSS6 88 aa7.36□□□□□ -1.23
VPS9D1-206ENST00000567379 SPANXDQ9BXN6 97 aa7.36□□□□□ -1.23
VPS9D1-206ENST00000567379 NHP2Q9NX24 153 aaKnown RBP7.36□□□□□ -1.23
VPS9D1-206ENST00000567379 SPANXCQ9NY87 97 aa7.36□□□□□ -1.23
VPS9D1-206ENST00000567379 HUWE1Q7Z6Z7 4374 aaKnown RBP7.36□□□□□ -1.23
VPS9D1-206ENST00000567379 K7EP13 123 aa7.35□□□□□ -1.23
VPS9D1-206ENST00000567379 DNAH10OSP0CZ25 163 aa7.35□□□□□ -1.23
VPS9D1-206ENST00000567379 Q8IZM0 81 aa7.35□□□□□ -1.23
VPS9D1-206ENST00000567379 LITAFQ99732 161 aa7.35□□□□□ -1.23
VPS9D1-206ENST00000567379 LINC00588Q9Y4M8 146 aa7.35□□□□□ -1.23
VPS9D1-206ENST00000567379 COX11Q9Y6N1 276 aa7.35□□□□□ -1.23
VPS9D1-206ENST00000567379 HYDINQ4G0P3 5121 aa7.34□□□□□ -1.23
VPS9D1-206ENST00000567379 IFITM1P13164 125 aa7.34□□□□□ -1.23
VPS9D1-206ENST00000567379 CFAP161Q6P656 301 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms