RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 CCDC153Q494R4 210 aa-0.43□□□□□ -2.48
CDH1-211ENST00000567320 SCIMPQ6UWF3 145 aa-0.43□□□□□ -2.48
CDH1-211ENST00000567320 FAM223AQ8IWN6 122 aa-0.43□□□□□ -2.48
CDH1-211ENST00000567320 CTAGE3PQ8IX95 158 aa-0.43□□□□□ -2.48
CDH1-211ENST00000567320 C9orf62Q8N4C0 152 aa-0.43□□□□□ -2.48
CDH1-211ENST00000567320 MYOZ3Q8TDC0 251 aa-0.43□□□□□ -2.48
CDH1-211ENST00000567320 MAFIPQ8WZ33 124 aa-0.43□□□□□ -2.48
CDH1-211ENST00000567320 SPRR4Q96PI1 79 aa-0.43□□□□□ -2.48
CDH1-211ENST00000567320 PSMG3Q9BT73 122 aaPredicted RBP-0.43□□□□□ -2.48
CDH1-211ENST00000567320 DDA1Q9BW61 102 aa-0.43□□□□□ -2.48
CDH1-211ENST00000567320 MRPL40Q9NQ50 206 aaKnown RBP-0.43□□□□□ -2.48
CDH1-211ENST00000567320 LINC00474Q9P2X8 69 aa-0.43□□□□□ -2.48
CDH1-211ENST00000567320 GINS2Q9Y248 185 aa-0.43□□□□□ -2.48
CDH1-211ENST00000567320 TARBP1Q13395 1621 aaKnown RBP-0.43□□□□□ -2.48
CDH1-211ENST00000567320 CC2D2AQ9P2K1 1620 aa-0.43□□□□□ -2.48
CDH1-211ENST00000567320 CFTRP13569 1480 aa-0.43□□□□□ -2.48
CDH1-211ENST00000567320 GRIN2AQ12879 1464 aa-0.43□□□□□ -2.48
CDH1-211ENST00000567320 LAMA2P24043 3122 aaKnown RBP-0.43□□□□□ -2.48
CDH1-211ENST00000567320 DNAH9Q9NYC9 4486 aa-0.43□□□□□ -2.48
CDH1-211ENST00000567320 CUL7Q14999 1698 aa-0.43□□□□□ -2.48
CDH1-211ENST00000567320 CHD8Q9HCK8 2581 aa-0.44□□□□□ -2.48
CDH1-211ENST00000567320 ANKRD30AQ9BXX3 1397 aa-0.44□□□□□ -2.48
CDH1-211ENST00000567320 C4AP0C0L4 1744 aa-0.44□□□□□ -2.48
CDH1-211ENST00000567320 C4BP0C0L5 1744 aa-0.44□□□□□ -2.48
CDH1-211ENST00000567320 SPTA1P02549 2419 aa-0.44□□□□□ -2.48
CDH1-211ENST00000567320 DIP2CQ9Y2E4 1556 aa-0.44□□□□□ -2.48
CDH1-211ENST00000567320 SETBP1Q9Y6X0 1596 aa-0.44□□□□□ -2.48
CDH1-211ENST00000567320 PKHD1L1Q86WI1 4243 aa-0.44□□□□□ -2.48
CDH1-211ENST00000567320 SMG6Q86US8 1419 aaKnown RBP-0.44□□□□□ -2.48
CDH1-211ENST00000567320 HIVEP1P15822 2718 aa-0.44□□□□□ -2.48
CDH1-211ENST00000567320 TRBV7-3A0A075B6L6 115 aa-0.44□□□□□ -2.48
CDH1-211ENST00000567320 A6NIN4 97 aa-0.44□□□□□ -2.48
CDH1-211ENST00000567320 FAM223BA6NKX1 122 aa-0.44□□□□□ -2.48
CDH1-211ENST00000567320 TSTD3H0UI37 97 aa-0.44□□□□□ -2.48
CDH1-211ENST00000567320 PFDN1O60925 122 aa-0.44□□□□□ -2.48
CDH1-211ENST00000567320 IGLC1P0CG04 106 aa-0.44□□□□□ -2.48
CDH1-211ENST00000567320 COX8AP10176 69 aa-0.44□□□□□ -2.48
CDH1-211ENST00000567320 RPS25P62851 125 aaKnown RBP-0.44□□□□□ -2.48
CDH1-211ENST00000567320 SFTA2Q6UW10 78 aa-0.44□□□□□ -2.48
CDH1-211ENST00000567320 FDCSPQ8NFU4 85 aa-0.44□□□□□ -2.48
CDH1-211ENST00000567320 TMEM263Q8WUH6 116 aaKnown RBP-0.44□□□□□ -2.48
CDH1-211ENST00000567320 MAGOHBQ96A72 148 aaKnown RBP-0.44□□□□□ -2.48
CDH1-211ENST00000567320 DPH3Q96FX2 82 aa-0.44□□□□□ -2.48
CDH1-211ENST00000567320 AQP10Q96PS8 301 aa-0.44□□□□□ -2.48
CDH1-211ENST00000567320 MGST2Q99735 147 aa-0.44□□□□□ -2.48
CDH1-211ENST00000567320 SELENOSQ9BQE4 189 aa-0.44□□□□□ -2.48
CDH1-211ENST00000567320 CENPHQ9H3R5 247 aa-0.44□□□□□ -2.48
CDH1-211ENST00000567320 DYNLRB1Q9NP97 96 aa-0.44□□□□□ -2.48
CDH1-211ENST00000567320 SAR1AQ9NR31 198 aa-0.44□□□□□ -2.48
CDH1-211ENST00000567320 CDC42SE2Q9NRR3 84 aa-0.44□□□□□ -2.48
CDH1-211ENST00000567320 DNAJC13O75165 2243 aa-0.44□□□□□ -2.48
CDH1-211ENST00000567320 RYR2Q92736 4967 aa-0.44□□□□□ -2.48
CDH1-211ENST00000567320 CHD1O14646 1710 aa-0.44□□□□□ -2.48
CDH1-211ENST00000567320 KNDC1Q76NI1 1749 aa-0.44□□□□□ -2.48
CDH1-211ENST00000567320 DNAH3Q8TD57 4116 aa-0.45□□□□□ -2.48
CDH1-211ENST00000567320 DNAH11Q96DT5 4516 aa-0.45□□□□□ -2.48
CDH1-211ENST00000567320 USP9YO00507 2555 aaPredicted RBP-0.45□□□□□ -2.48
CDH1-211ENST00000567320 PLECQ15149 4684 aaKnown RBP-0.45□□□□□ -2.48
CDH1-211ENST00000567320 URB1O60287 2271 aaKnown RBP-0.45□□□□□ -2.48
CDH1-211ENST00000567320 KIAA1109Q2LD37 5005 aa-0.45□□□□□ -2.48
CDH1-211ENST00000567320 PREX1Q8TCU6 1659 aa-0.45□□□□□ -2.48
CDH1-211ENST00000567320 A0A087WVE0 104 aa-0.45□□□□□ -2.48
CDH1-211ENST00000567320 GNG14A0A1W2PPG7 69 aa-0.45□□□□□ -2.48
CDH1-211ENST00000567320 MIF4GDA9UHW6 222 aaKnown RBP-0.45□□□□□ -2.48
CDH1-211ENST00000567320 CHKB-CPT1BH3BT56 60 aa-0.45□□□□□ -2.48
CDH1-211ENST00000567320 K7EP13 123 aa-0.45□□□□□ -2.48
CDH1-211ENST00000567320 K7ERU9 68 aa-0.45□□□□□ -2.48
CDH1-211ENST00000567320 IFNGP01579 166 aa-0.45□□□□□ -2.48
CDH1-211ENST00000567320 APOC3P02656 99 aa-0.45□□□□□ -2.48
CDH1-211ENST00000567320 MGPP08493 103 aa-0.45□□□□□ -2.48
CDH1-211ENST00000567320 TPPP2P59282 170 aa-0.45□□□□□ -2.48
CDH1-211ENST00000567320 CKS1BP61024 79 aa-0.45□□□□□ -2.48
CDH1-211ENST00000567320 UBE2D3P61077 147 aa-0.45□□□□□ -2.48
CDH1-211ENST00000567320 UBE2D2P62837 147 aa-0.45□□□□□ -2.48
CDH1-211ENST00000567320 HSD52Q0P140 79 aa-0.45□□□□□ -2.48
CDH1-211ENST00000567320 MRPL54Q6P161 138 aaKnown RBP-0.45□□□□□ -2.48
CDH1-211ENST00000567320 SMIM15Q7Z3B0 74 aa-0.45□□□□□ -2.48
CDH1-211ENST00000567320 AKAP14Q86UN6 197 aa-0.45□□□□□ -2.48
CDH1-211ENST00000567320 WFDC13Q8IUB5 93 aa-0.45□□□□□ -2.48
CDH1-211ENST00000567320 TSTD1Q8NFU3 115 aa-0.45□□□□□ -2.48
CDH1-211ENST00000567320 SKA2Q8WVK7 121 aaPredicted RBP-0.45□□□□□ -2.48
CDH1-211ENST00000567320 FAM167A-AS1Q96KT0 104 aa-0.45□□□□□ -2.48
CDH1-211ENST00000567320 MRPL34Q9BQ48 92 aaKnown RBP-0.45□□□□□ -2.48
CDH1-211ENST00000567320 PDCD10Q9BUL8 212 aa-0.45□□□□□ -2.48
CDH1-211ENST00000567320 TPT1P8Q9HAU6 139 aa-0.45□□□□□ -2.48
CDH1-211ENST00000567320 NXT2Q9NPJ8 142 aaKnown RBP-0.45□□□□□ -2.48
CDH1-211ENST00000567320 GSKIPQ9P0R6 139 aa-0.45□□□□□ -2.48
CDH1-211ENST00000567320 HSPB11Q9Y547 144 aa-0.45□□□□□ -2.48
CDH1-211ENST00000567320 ARL2-SNX15V9GYD0 113 aa-0.45□□□□□ -2.48
CDH1-211ENST00000567320 MAP3K1Q13233 1512 aa-0.45□□□□□ -2.48
CDH1-211ENST00000567320 RNF213Q63HN8 5207 aa-0.45□□□□□ -2.48
CDH1-211ENST00000567320 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.45□□□□□ -2.48
CDH1-211ENST00000567320 EPG5Q9HCE0 2579 aa-0.46□□□□□ -2.48
CDH1-211ENST00000567320 EDC4Q6P2E9 1401 aaKnown RBP-0.46□□□□□ -2.48
CDH1-211ENST00000567320 TEP1Q99973 2627 aaKnown RBP-0.46□□□□□ -2.48
CDH1-211ENST00000567320 SHPRHQ149N8 1683 aa-0.46□□□□□ -2.48
CDH1-211ENST00000567320 TOPAZ1Q8N9V7 1692 aa-0.46□□□□□ -2.48
CDH1-211ENST00000567320 DNAH2Q9P225 4427 aa-0.46□□□□□ -2.48
CDH1-211ENST00000567320 MRC2Q9UBG0 1479 aa-0.46□□□□□ -2.48
CDH1-211ENST00000567320 LRRC37AA6NMS7 1700 aa-0.46□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms