RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 MGPP08493 103 aa3.67□□□□□ -1.82
CAPN3-214ENST00000565274 IGHV3-30-5P0DP03 117 aa3.67□□□□□ -1.82
CAPN3-214ENST00000565274 LINC00315P59091 139 aa3.67□□□□□ -1.82
CAPN3-214ENST00000565274 ZNF56Q15929 161 aa3.67□□□□□ -1.82
CAPN3-214ENST00000565274 RPL39LQ96EH5 51 aaKnown RBP3.67□□□□□ -1.82
CAPN3-214ENST00000565274 BPESC1Q9GZL8 116 aa3.67□□□□□ -1.82
CAPN3-214ENST00000565274 KLK15Q9H2R5 256 aa3.67□□□□□ -1.82
CAPN3-214ENST00000565274 BSNQ9UPA5 3926 aa3.67□□□□□ -1.82
CAPN3-214ENST00000565274 IGF2RP11717 2491 aa3.66□□□□□ -1.82
CAPN3-214ENST00000565274 IGIPA6NJ69 53 aa3.66□□□□□ -1.82
CAPN3-214ENST00000565274 H7BZZ5 65 aa3.66□□□□□ -1.82
CAPN3-214ENST00000565274 SLC25A20O43772 301 aa3.66□□□□□ -1.82
CAPN3-214ENST00000565274 TSHBP01222 138 aa3.66□□□□□ -1.82
CAPN3-214ENST00000565274 IGHV4-39P01824 125 aa3.66□□□□□ -1.82
CAPN3-214ENST00000565274 CFC1BP0CG36 223 aa3.66□□□□□ -1.82
CAPN3-214ENST00000565274 CFC1P0CG37 223 aa3.66□□□□□ -1.82
CAPN3-214ENST00000565274 POLR2KP53803 58 aaKnown RBP3.66□□□□□ -1.82
CAPN3-214ENST00000565274 TSPEAR-AS2P59090 65 aa3.66□□□□□ -1.82
CAPN3-214ENST00000565274 CXCL6P80162 114 aa3.66□□□□□ -1.82
CAPN3-214ENST00000565274 RBMY1FQ15415 496 aaKnown RBP3.66□□□□□ -1.82
CAPN3-214ENST00000565274 C18orf65Q6ZTR6 163 aa3.66□□□□□ -1.82
CAPN3-214ENST00000565274 SLC25A29Q8N8R3 303 aa3.66□□□□□ -1.82
CAPN3-214ENST00000565274 AMELXQ99217 191 aa3.66□□□□□ -1.82
CAPN3-214ENST00000565274 PRO1854Q9UHT4 67 aa3.66□□□□□ -1.82
CAPN3-214ENST00000565274 SPENQ96T58 3664 aaKnown RBP3.65□□□□□ -1.82
CAPN3-214ENST00000565274 IGHV3OR16-8A0A075B7F1 116 aa3.65□□□□□ -1.83
CAPN3-214ENST00000565274 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.65□□□□□ -1.83
CAPN3-214ENST00000565274 IGHV3-35A0A0C4DH35 117 aa3.65□□□□□ -1.83
CAPN3-214ENST00000565274 IGHV3-66A0A0C4DH42 116 aa3.65□□□□□ -1.83
CAPN3-214ENST00000565274 A0A0J9YX75 114 aa3.65□□□□□ -1.83
CAPN3-214ENST00000565274 A8MTW9 85 aa3.65□□□□□ -1.83
CAPN3-214ENST00000565274 LEPROTO15243 131 aa3.65□□□□□ -1.83
CAPN3-214ENST00000565274 IGHV3-33P01772 117 aa3.65□□□□□ -1.83
CAPN3-214ENST00000565274 RNASE3P12724 160 aaKnown RBP3.65□□□□□ -1.83
CAPN3-214ENST00000565274 GNLYP22749 145 aa3.65□□□□□ -1.83
CAPN3-214ENST00000565274 S100A4P26447 101 aaKnown RBP3.65□□□□□ -1.83
CAPN3-214ENST00000565274 DSCR9P59020 149 aa3.65□□□□□ -1.83
CAPN3-214ENST00000565274 BLCAPP62952 87 aa3.65□□□□□ -1.83
CAPN3-214ENST00000565274 RHOHQ15669 191 aa3.65□□□□□ -1.83
CAPN3-214ENST00000565274 C14orf178Q8N769 122 aaPredicted RBP3.65□□□□□ -1.83
CAPN3-214ENST00000565274 TMEM263Q8WUH6 116 aaKnown RBP3.65□□□□□ -1.83
CAPN3-214ENST00000565274 PHLDA3Q9Y5J5 127 aa3.65□□□□□ -1.83
CAPN3-214ENST00000565274 ARHGAP32A7KAX9 2087 aa3.65□□□□□ -1.83
CAPN3-214ENST00000565274 ADGRG4Q8IZF6 3080 aa3.64□□□□□ -1.83
CAPN3-214ENST00000565274 TMEM223A0PJW6 202 aa3.64□□□□□ -1.83
CAPN3-214ENST00000565274 SDHAF1A6NFY7 115 aa3.64□□□□□ -1.83
CAPN3-214ENST00000565274 FUSP35637 526 aaKnown RBP eCLIP3.64□□□□□ -1.83
CAPN3-214ENST00000565274 UBE2AP49459 152 aa3.64□□□□□ -1.83
CAPN3-214ENST00000565274 RBM3P98179 157 aaKnown RBP3.64□□□□□ -1.83
CAPN3-214ENST00000565274 REG3AQ06141 175 aa3.64□□□□□ -1.83
CAPN3-214ENST00000565274 ATXN8Q156A1 80 aa3.64□□□□□ -1.83
CAPN3-214ENST00000565274 SUMO4Q6EEV6 95 aa3.64□□□□□ -1.83
CAPN3-214ENST00000565274 SFTA2Q6UW10 78 aa3.64□□□□□ -1.83
CAPN3-214ENST00000565274 KLHL30-AS1Q8NEE0 82 aa3.64□□□□□ -1.83
CAPN3-214ENST00000565274 RHPN1-AS1Q9BWJ2 59 aa3.64□□□□□ -1.83
CAPN3-214ENST00000565274 ATMQ13315 3056 aa3.63□□□□□ -1.83
CAPN3-214ENST00000565274 BOD1L1Q8NFC6 3051 aa3.63□□□□□ -1.83
CAPN3-214ENST00000565274 IGHV3OR16-13A0A075B7E8 117 aa3.63□□□□□ -1.83
CAPN3-214ENST00000565274 IGHV3-74A0A0B4J1X5 117 aa3.63□□□□□ -1.83
CAPN3-214ENST00000565274 IGLV9-49A0A0B4J1Y8 123 aa3.63□□□□□ -1.83
CAPN3-214ENST00000565274 IGHV4-61A0A0C4DH41 118 aa3.63□□□□□ -1.83
CAPN3-214ENST00000565274 TRBV30A0A0K0K1B3 111 aa3.63□□□□□ -1.83
CAPN3-214ENST00000565274 TRBV10-2A0A0K0K1G8 114 aa3.63□□□□□ -1.83
CAPN3-214ENST00000565274 H3BMM0 161 aa3.63□□□□□ -1.83
CAPN3-214ENST00000565274 K7EQD1 137 aa3.63□□□□□ -1.83
CAPN3-214ENST00000565274 Q1T7F1 81 aa3.63□□□□□ -1.83
CAPN3-214ENST00000565274 ATP11AUNQ6ZP68 121 aa3.63□□□□□ -1.83
CAPN3-214ENST00000565274 UBE2WQ96B02 151 aa3.63□□□□□ -1.83
CAPN3-214ENST00000565274 CHD8Q9HCK8 2581 aa3.62□□□□□ -1.83
CAPN3-214ENST00000565274 HIVEP3Q5T1R4 2406 aa3.62□□□□□ -1.83
CAPN3-214ENST00000565274 MED13LQ71F56 2210 aa3.62□□□□□ -1.83
CAPN3-214ENST00000565274 ACACBO00763 2458 aa3.62□□□□□ -1.83
CAPN3-214ENST00000565274 IGHV3-49A0A0A0MS15 119 aa3.62□□□□□ -1.83
CAPN3-214ENST00000565274 IGHV3-16A0A0C4DH30 117 aa3.62□□□□□ -1.83
CAPN3-214ENST00000565274 B4DSR2 109 aa3.62□□□□□ -1.83
CAPN3-214ENST00000565274 C19orf84I3L1E1 186 aa3.62□□□□□ -1.83
CAPN3-214ENST00000565274 K7EQG2 157 aa3.62□□□□□ -1.83
CAPN3-214ENST00000565274 PRM2P04554 102 aa3.62□□□□□ -1.83
CAPN3-214ENST00000565274 MSMBP08118 114 aa3.62□□□□□ -1.83
CAPN3-214ENST00000565274 ZNF22P17026 224 aaPredicted RBP3.62□□□□□ -1.83
CAPN3-214ENST00000565274 RPL39P62891 51 aaKnown RBP3.62□□□□□ -1.83
CAPN3-214ENST00000565274 CIRBPQ14011 172 aaKnown RBP3.62□□□□□ -1.83
CAPN3-214ENST00000565274 LCE1AQ5T7P2 110 aa3.62□□□□□ -1.83
CAPN3-214ENST00000565274 LINC00467Q9BRT7 94 aa3.62□□□□□ -1.83
CAPN3-214ENST00000565274 AGRNO00468 2067 aa3.62□□□□□ -1.83
CAPN3-214ENST00000565274 SPTBN1Q01082 2364 aaKnown RBP3.62□□□□□ -1.83
CAPN3-214ENST00000565274 NBASA2RRP1 2371 aa3.61□□□□□ -1.83
CAPN3-214ENST00000565274 ZZEF1O43149 2961 aa3.61□□□□□ -1.83
CAPN3-214ENST00000565274 A0A0J9YXY3 114 aa3.61□□□□□ -1.83
CAPN3-214ENST00000565274 H3BUX3 64 aa3.61□□□□□ -1.83
CAPN3-214ENST00000565274 M0QY20 66 aa3.61□□□□□ -1.83
CAPN3-214ENST00000565274 GNRH2O43555 120 aa3.61□□□□□ -1.83
CAPN3-214ENST00000565274 IGHV4-38-2P0DP08 117 aa3.61□□□□□ -1.83
CAPN3-214ENST00000565274 XCL1P47992 114 aa3.61□□□□□ -1.83
CAPN3-214ENST00000565274 Q1RN00 199 aa3.61□□□□□ -1.83
CAPN3-214ENST00000565274 MUSTN1Q8IVN3 82 aa3.61□□□□□ -1.83
CAPN3-214ENST00000565274 ATRXP46100 2492 aa3.61□□□□□ -1.83
CAPN3-214ENST00000565274 HRNRQ86YZ3 2850 aaPredicted RBP3.6□□□□□ -1.83
CAPN3-214ENST00000565274 PKD1L2Q7Z442 2459 aa3.6□□□□□ -1.83
CAPN3-214ENST00000565274 IGLV4-3A0A075B6K6 122 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms