RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 GAGE12FP0CL80 117 aa5.14□□□□□ -1.59
HERPUD1-209ENST00000564678 GAGE12GP0CL81 117 aa5.14□□□□□ -1.59
HERPUD1-209ENST00000564678 GAGE12IP0CL82 117 aa5.14□□□□□ -1.59
HERPUD1-209ENST00000564678 HERVK_113P63121 156 aa5.14□□□□□ -1.59
HERPUD1-209ENST00000564678 FOXI1Q12951 378 aa5.14□□□□□ -1.59
HERPUD1-209ENST00000564678 Q6ZUT4 128 aa5.14□□□□□ -1.59
HERPUD1-209ENST00000564678 Q6ZVQ6 151 aa5.14□□□□□ -1.59
HERPUD1-209ENST00000564678 NAA38Q9BRA0 125 aaKnown RBP5.14□□□□□ -1.59
HERPUD1-209ENST00000564678 SETD2Q9BYW2 2564 aaPredicted RBP5.14□□□□□ -1.59
HERPUD1-209ENST00000564678 NOTCH2Q04721 2471 aa5.14□□□□□ -1.59
HERPUD1-209ENST00000564678 TMEM238C9JI98 176 aa5.14□□□□□ -1.59
HERPUD1-209ENST00000564678 NTM-AS1Q6ZSK4 140 aa5.14□□□□□ -1.59
HERPUD1-209ENST00000564678 SBSPONQ8IVN8 264 aa5.14□□□□□ -1.59
HERPUD1-209ENST00000564678 VSIG2Q96IQ7 327 aa5.14□□□□□ -1.59
HERPUD1-209ENST00000564678 TRGV4A0A0C4DH28 118 aa5.13□□□□□ -1.59
HERPUD1-209ENST00000564678 IGHV4-28A0A0C4DH34 117 aa5.13□□□□□ -1.59
HERPUD1-209ENST00000564678 GAGE12JA6NER3 117 aa5.13□□□□□ -1.59
HERPUD1-209ENST00000564678 CRLF1O75462 422 aa5.13□□□□□ -1.59
HERPUD1-209ENST00000564678 GAGE4Q13068 117 aa5.13□□□□□ -1.59
HERPUD1-209ENST00000564678 GAGE5Q13069 117 aa5.13□□□□□ -1.59
HERPUD1-209ENST00000564678 LINC00612Q8N6U2 182 aa5.13□□□□□ -1.59
HERPUD1-209ENST00000564678 NOTCH3Q9UM47 2321 aa5.13□□□□□ -1.59
HERPUD1-209ENST00000564678 A0A0J9YXY3 114 aa5.12□□□□□ -1.59
HERPUD1-209ENST00000564678 F8W1H4 67 aa5.12□□□□□ -1.59
HERPUD1-209ENST00000564678 K7ERU9 68 aa5.12□□□□□ -1.59
HERPUD1-209ENST00000564678 RPL24P83731 157 aaKnown RBP5.12□□□□□ -1.59
HERPUD1-209ENST00000564678 FHL2Q14192 279 aa5.12□□□□□ -1.59
HERPUD1-209ENST00000564678 LYRM7Q5U5X0 104 aa5.12□□□□□ -1.59
HERPUD1-209ENST00000564678 KRTAP9-9Q9BYP9 154 aa5.12□□□□□ -1.59
HERPUD1-209ENST00000564678 KRTAP9-4Q9BYQ2 154 aa5.12□□□□□ -1.59
HERPUD1-209ENST00000564678 CDC42SE2Q9NRR3 84 aa5.12□□□□□ -1.59
HERPUD1-209ENST00000564678 MAST4O15021 2626 aa5.12□□□□□ -1.59
HERPUD1-209ENST00000564678 CYSRT1A8MQ03 144 aa5.12□□□□□ -1.59
HERPUD1-209ENST00000564678 OCIAD2Q56VL3 154 aa5.12□□□□□ -1.59
HERPUD1-209ENST00000564678 RNASE13Q5GAN3 156 aaKnown RBP5.12□□□□□ -1.59
HERPUD1-209ENST00000564678 ZFAND6Q6FIF0 208 aa5.12□□□□□ -1.59
HERPUD1-209ENST00000564678 C10orf126Q8N4M7 172 aa5.12□□□□□ -1.59
HERPUD1-209ENST00000564678 TMEM243Q9BU79 118 aa5.12□□□□□ -1.59
HERPUD1-209ENST00000564678 NDUFA12Q9UI09 145 aa5.12□□□□□ -1.59
HERPUD1-209ENST00000564678 IGHV3-64A0A075B6Q5 118 aa5.11□□□□□ -1.59
HERPUD1-209ENST00000564678 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.11□□□□□ -1.59
HERPUD1-209ENST00000564678 UBE2L6O14933 153 aa5.11□□□□□ -1.59
HERPUD1-209ENST00000564678 TIMM17BO60830 172 aa5.11□□□□□ -1.59
HERPUD1-209ENST00000564678 CFC1BP0CG36 223 aa5.11□□□□□ -1.59
HERPUD1-209ENST00000564678 CFC1P0CG37 223 aa5.11□□□□□ -1.59
HERPUD1-209ENST00000564678 LINC00694P0DN24 101 aa5.11□□□□□ -1.59
HERPUD1-209ENST00000564678 TMEM101Q96IK0 257 aa5.11□□□□□ -1.59
HERPUD1-209ENST00000564678 SPANXDQ9BXN6 97 aa5.11□□□□□ -1.59
HERPUD1-209ENST00000564678 SPANXCQ9NY87 97 aa5.11□□□□□ -1.59
HERPUD1-209ENST00000564678 CDKN2A-AS1Q9UH64 79 aa5.11□□□□□ -1.59
HERPUD1-209ENST00000564678 TRAV8-3A0A0A6YYJ7 113 aa5.11□□□□□ -1.59
HERPUD1-209ENST00000564678 A0A0B4J2C4 111 aa5.11□□□□□ -1.59
HERPUD1-209ENST00000564678 APOMO95445 188 aa5.11□□□□□ -1.59
HERPUD1-209ENST00000564678 LINC00242Q5T6M2 205 aa5.11□□□□□ -1.59
HERPUD1-209ENST00000564678 WFDC9Q8NEX5 89 aa5.11□□□□□ -1.59
HERPUD1-209ENST00000564678 MRAPQ8TCY5 172 aa5.11□□□□□ -1.59
HERPUD1-209ENST00000564678 PRO1854Q9UHT4 67 aa5.11□□□□□ -1.59
HERPUD1-209ENST00000564678 OTOGQ6ZRI0 2925 aa5.11□□□□□ -1.59
HERPUD1-209ENST00000564678 FN1P02751 2386 aaKnown RBP5.1□□□□□ -1.59
HERPUD1-209ENST00000564678 IGLV5-39A0A0G2JS06 123 aa5.1□□□□□ -1.59
HERPUD1-209ENST00000564678 MUSTN1Q8IVN3 82 aa5.1□□□□□ -1.59
HERPUD1-209ENST00000564678 C2CD3Q4AC94 2353 aa5.1□□□□□ -1.59
HERPUD1-209ENST00000564678 JMJD1CQ15652 2540 aa5.09□□□□□ -1.59
HERPUD1-209ENST00000564678 TRBV20-1A0A075B6N2 111 aa5.09□□□□□ -1.59
HERPUD1-209ENST00000564678 TRBV6-8A0A0A6YYG3 113 aa5.09□□□□□ -1.59
HERPUD1-209ENST00000564678 LYRM9A8MSI8 78 aa5.09□□□□□ -1.59
HERPUD1-209ENST00000564678 SPINK8P0C7L1 97 aa5.09□□□□□ -1.59
HERPUD1-209ENST00000564678 IFITM1P13164 125 aa5.09□□□□□ -1.59
HERPUD1-209ENST00000564678 APOC4P55056 127 aa5.09□□□□□ -1.59
HERPUD1-209ENST00000564678 RBX1P62877 108 aa5.09□□□□□ -1.59
HERPUD1-209ENST00000564678 LITAFQ99732 161 aa5.09□□□□□ -1.59
HERPUD1-209ENST00000564678 NDUFA1O15239 70 aa5.09□□□□□ -1.59
HERPUD1-209ENST00000564678 COX6A2Q02221 97 aa5.09□□□□□ -1.59
HERPUD1-209ENST00000564678 CIRBPQ14011 172 aaKnown RBP5.09□□□□□ -1.59
HERPUD1-209ENST00000564678 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.09□□□□□ -1.59
HERPUD1-209ENST00000564678 H3BMG7 143 aa5.08□□□□□ -1.6
HERPUD1-209ENST00000564678 C2orf48Q96LS8 159 aa5.08□□□□□ -1.6
HERPUD1-209ENST00000564678 PRO0255Q9UI72 69 aa5.08□□□□□ -1.6
HERPUD1-209ENST00000564678 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.08□□□□□ -1.6
HERPUD1-209ENST00000564678 TRAV13-1A0A0B4J241 112 aa5.08□□□□□ -1.6
HERPUD1-209ENST00000564678 LOC100131303A0A0U1RQF7 123 aa5.08□□□□□ -1.6
HERPUD1-209ENST00000564678 IGHV4-30-4P0DP06 118 aa5.08□□□□□ -1.6
HERPUD1-209ENST00000564678 DEFB130BP0DP73 79 aa5.08□□□□□ -1.6
HERPUD1-209ENST00000564678 DEFB130AP0DP74 79 aa5.08□□□□□ -1.6
HERPUD1-209ENST00000564678 MIAQ16674 131 aa5.08□□□□□ -1.6
HERPUD1-209ENST00000564678 COPS9Q8WXC6 57 aa5.08□□□□□ -1.6
HERPUD1-209ENST00000564678 FAM218AQ96MZ4 157 aa5.08□□□□□ -1.6
HERPUD1-209ENST00000564678 LOC107984156A0A0G2JMH3 177 aa5.07□□□□□ -1.6
HERPUD1-209ENST00000564678 SMIM1B2RUZ4 78 aa5.07□□□□□ -1.6
HERPUD1-209ENST00000564678 IGHV3-33P01772 117 aa5.07□□□□□ -1.6
HERPUD1-209ENST00000564678 PRSS2P07478 247 aa5.07□□□□□ -1.6
HERPUD1-209ENST00000564678 ARL17AQ8IVW1 177 aa5.07□□□□□ -1.6
HERPUD1-209ENST00000564678 C11orf45Q8TAV5 145 aa5.07□□□□□ -1.6
HERPUD1-209ENST00000564678 Q9HAA7 133 aa5.07□□□□□ -1.6
HERPUD1-209ENST00000564678 ERG28Q9UKR5 140 aa5.07□□□□□ -1.6
HERPUD1-209ENST00000564678 IGLV9-49A0A0B4J1Y8 123 aa5.06□□□□□ -1.6
HERPUD1-209ENST00000564678 F5H768 121 aa5.06□□□□□ -1.6
HERPUD1-209ENST00000564678 ADAMTSL4-AS1Q5T5F5 129 aa5.06□□□□□ -1.6
HERPUD1-209ENST00000564678 ATP6V0E2Q8NHE4 81 aa5.06□□□□□ -1.6
HERPUD1-209ENST00000564678 KRTAP4-2Q9BYR5 136 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms