RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 MALP21145 153 aa5.42□□□□□ -1.54
ATXN3-249ENST00000564606 APOC4P55056 127 aa5.42□□□□□ -1.54
ATXN3-249ENST00000564606 COX6A2Q02221 97 aa5.42□□□□□ -1.54
ATXN3-249ENST00000564606 LINC01006Q8NI28 216 aa5.42□□□□□ -1.54
ATXN3-249ENST00000564606 CITED2Q99967 270 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-249ENST00000564606 TOMM7Q9P0U1 55 aa5.42□□□□□ -1.54
ATXN3-249ENST00000564606 NDUFC2O95298 119 aa5.41□□□□□ -1.54
ATXN3-249ENST00000564606 LINC00694P0DN24 101 aa5.41□□□□□ -1.54
ATXN3-249ENST00000564606 HILS1P60008 231 aa5.41□□□□□ -1.54
ATXN3-249ENST00000564606 C9orf66Q5T8R8 295 aa5.41□□□□□ -1.54
ATXN3-249ENST00000564606 NTM-AS1Q6ZSK4 140 aa5.41□□□□□ -1.54
ATXN3-249ENST00000564606 MIR7-3HGQ8N6C7 128 aa5.41□□□□□ -1.54
ATXN3-249ENST00000564606 DOPEY2Q9Y3R5 2298 aa5.41□□□□□ -1.54
ATXN3-249ENST00000564606 IGHV3OR16-9A0A0B4J2B5 98 aa5.4□□□□□ -1.54
ATXN3-249ENST00000564606 PAX4O43316 350 aa5.4□□□□□ -1.54
ATXN3-249ENST00000564606 RPL35AP18077 110 aaKnown RBP5.4□□□□□ -1.54
ATXN3-249ENST00000564606 FHL2Q14192 279 aa5.4□□□□□ -1.54
ATXN3-249ENST00000564606 ATP5EP2Q5VTU8 51 aa5.4□□□□□ -1.54
ATXN3-249ENST00000564606 ORMDL1Q9P0S3 153 aa5.4□□□□□ -1.54
ATXN3-249ENST00000564606 CREBBPQ92793 2442 aa5.39□□□□□ -1.55
ATXN3-249ENST00000564606 LINC00959A0A1B0GUT2 108 aa5.39□□□□□ -1.55
ATXN3-249ENST00000564606 A8MZ25 164 aa5.39□□□□□ -1.55
ATXN3-249ENST00000564606 TMEM256-PLSCR3K7ERE1 68 aa5.39□□□□□ -1.55
ATXN3-249ENST00000564606 LINC00612Q8N6U2 182 aa5.39□□□□□ -1.55
ATXN3-249ENST00000564606 CSNK1G2-AS1Q8NCQ2 148 aa5.39□□□□□ -1.55
ATXN3-249ENST00000564606 OR13C6PQ8NH95 151 aa5.39□□□□□ -1.55
ATXN3-249ENST00000564606 DCHS2Q6V1P9 2916 aa5.38□□□□□ -1.55
ATXN3-249ENST00000564606 A0A0U1RRA0 63 aa5.38□□□□□ -1.55
ATXN3-249ENST00000564606 ATOX1O00244 68 aa5.38□□□□□ -1.55
ATXN3-249ENST00000564606 CD164L2Q6UWJ8 174 aa5.38□□□□□ -1.55
ATXN3-249ENST00000564606 CSPG4Q6UVK1 2322 aa5.37□□□□□ -1.55
ATXN3-249ENST00000564606 ASPMQ8IZT6 3477 aa5.37□□□□□ -1.55
ATXN3-249ENST00000564606 GYPEP15421 78 aa5.37□□□□□ -1.55
ATXN3-249ENST00000564606 PDE6GP18545 87 aa5.37□□□□□ -1.55
ATXN3-249ENST00000564606 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-249ENST00000564606 PKD1L2Q7Z442 2459 aa5.37□□□□□ -1.55
ATXN3-249ENST00000564606 SMG1Q96Q15 3661 aaKnown RBP5.36□□□□□ -1.55
ATXN3-249ENST00000564606 SPTBN4Q9H254 2564 aa5.36□□□□□ -1.55
ATXN3-249ENST00000564606 PLAC8L1A1L4L8 177 aa5.36□□□□□ -1.55
ATXN3-249ENST00000564606 UQCRQO14949 82 aa5.36□□□□□ -1.55
ATXN3-249ENST00000564606 LY6G6DO95868 133 aa5.36□□□□□ -1.55
ATXN3-249ENST00000564606 PRM2P04554 102 aa5.36□□□□□ -1.55
ATXN3-249ENST00000564606 MIFP14174 115 aa5.36□□□□□ -1.55
ATXN3-249ENST00000564606 CCL18P55774 89 aa5.36□□□□□ -1.55
ATXN3-249ENST00000564606 GAGE2AQ6NT46 116 aa5.36□□□□□ -1.55
ATXN3-249ENST00000564606 SOSTDC1Q6X4U4 206 aa5.36□□□□□ -1.55
ATXN3-249ENST00000564606 KRTAP1-3Q8IUG1 177 aa5.36□□□□□ -1.55
ATXN3-249ENST00000564606 WFDC11Q8NEX6 87 aa5.36□□□□□ -1.55
ATXN3-249ENST00000564606 Q9UF83 564 aa5.36□□□□□ -1.55
ATXN3-249ENST00000564606 NCOR2Q9Y618 2525 aa5.36□□□□□ -1.55
ATXN3-249ENST00000564606 ANKRD17O75179 2603 aaKnown RBP5.36□□□□□ -1.55
ATXN3-249ENST00000564606 CACNA1AO00555 2505 aa5.35□□□□□ -1.55
ATXN3-249ENST00000564606 IGHV4-28A0A0C4DH34 117 aa5.35□□□□□ -1.55
ATXN3-249ENST00000564606 IGKV3OR2-268A0A0C4DH90 116 aa5.35□□□□□ -1.55
ATXN3-249ENST00000564606 GIG44P09565 113 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-249ENST00000564606 DEFB130BP0DP73 79 aa5.35□□□□□ -1.55
ATXN3-249ENST00000564606 DEFB130AP0DP74 79 aa5.35□□□□□ -1.55
ATXN3-249ENST00000564606 KRTAP10-9P60411 292 aa5.35□□□□□ -1.55
ATXN3-249ENST00000564606 DAD1P61803 113 aa5.35□□□□□ -1.55
ATXN3-249ENST00000564606 SDIM1Q6ZPB5 146 aa5.35□□□□□ -1.55
ATXN3-249ENST00000564606 SMIM11BQ8TCY0 68 aa5.35□□□□□ -1.55
ATXN3-249ENST00000564606 PIEZO1Q92508 2521 aa5.35□□□□□ -1.55
ATXN3-249ENST00000564606 ACACBO00763 2458 aa5.35□□□□□ -1.55
ATXN3-249ENST00000564606 SPG11Q96JI7 2443 aa5.35□□□□□ -1.55
ATXN3-249ENST00000564606 LAMA5O15230 3695 aa5.34□□□□□ -1.55
ATXN3-249ENST00000564606 CHD8Q9HCK8 2581 aa5.34□□□□□ -1.55
ATXN3-249ENST00000564606 F8WDY8 70 aa5.34□□□□□ -1.55
ATXN3-249ENST00000564606 J3QKU1 62 aa5.34□□□□□ -1.55
ATXN3-249ENST00000564606 CRLF1O75462 422 aa5.34□□□□□ -1.55
ATXN3-249ENST00000564606 PRB1P04280 392 aa5.34□□□□□ -1.55
ATXN3-249ENST00000564606 PFN2P35080 140 aa5.34□□□□□ -1.55
ATXN3-249ENST00000564606 Q6JHZ5 121 aa5.34□□□□□ -1.55
ATXN3-249ENST00000564606 C5orf38Q86SI9 138 aa5.34□□□□□ -1.55
ATXN3-249ENST00000564606 ESM1Q9NQ30 184 aa5.34□□□□□ -1.55
ATXN3-249ENST00000564606 KLK5Q9Y337 293 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-249ENST00000564606 CR1P17927 2039 aa5.34□□□□□ -1.55
ATXN3-249ENST00000564606 NACAE9PAV3 2078 aa5.33□□□□□ -1.56
ATXN3-249ENST00000564606 IGLV4-60A0A075B6I1 120 aa5.33□□□□□ -1.56
ATXN3-249ENST00000564606 FAM236AA0A1B0GUQ0 79 aa5.33□□□□□ -1.56
ATXN3-249ENST00000564606 FAM236BA0A1B0GV22 79 aa5.33□□□□□ -1.56
ATXN3-249ENST00000564606 B5MCH6 92 aa5.33□□□□□ -1.56
ATXN3-249ENST00000564606 SPART-AS1P0CW21 52 aa5.33□□□□□ -1.56
ATXN3-249ENST00000564606 LINC00337Q8N6G1 96 aa5.33□□□□□ -1.56
ATXN3-249ENST00000564606 LINC00482Q8N8I6 264 aa5.33□□□□□ -1.56
ATXN3-249ENST00000564606 OBSCN-AS1Q96MR7 158 aa5.33□□□□□ -1.56
ATXN3-249ENST00000564606 UBL5Q9BZL1 73 aa5.33□□□□□ -1.56
ATXN3-249ENST00000564606 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-249ENST00000564606 NAV2Q8IVL1 2488 aa5.33□□□□□ -1.56
ATXN3-249ENST00000564606 ITPR1Q14643 2758 aa5.33□□□□□ -1.56
ATXN3-249ENST00000564606 IGKV2-28A0A075B6P5 120 aa5.32□□□□□ -1.56
ATXN3-249ENST00000564606 TRBV10-3A0A0K0K1G6 114 aa5.32□□□□□ -1.56
ATXN3-249ENST00000564606 LECT2O14960 151 aa5.32□□□□□ -1.56
ATXN3-249ENST00000564606 BCE1O60756 84 aa5.32□□□□□ -1.56
ATXN3-249ENST00000564606 IGKV2D-28P01615 120 aa5.32□□□□□ -1.56
ATXN3-249ENST00000564606 ANGP03950 147 aaKnown RBP5.32□□□□□ -1.56
ATXN3-249ENST00000564606 XCL1P47992 114 aa5.32□□□□□ -1.56
ATXN3-249ENST00000564606 LELP1Q5T871 98 aa5.32□□□□□ -1.56
ATXN3-249ENST00000564606 SMIM20Q8N5G0 67 aa5.32□□□□□ -1.56
ATXN3-249ENST00000564606 C3orf22Q8N5N4 141 aa5.32□□□□□ -1.56
ATXN3-249ENST00000564606 LINC00167Q96N53 147 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms