RNA–Protein interactions for RNA: ENST00000560997.1

SNX22-206, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 3,367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-206ENST00000560997 PDZD2O15018 2839 aa6.94□□□□□ -1.3
SNX22-206ENST00000560997 H7C423 109 aa6.94□□□□□ -1.3
SNX22-206ENST00000560997 KRTAP1-1Q07627 177 aa6.94□□□□□ -1.3
SNX22-206ENST00000560997 SOSTDC1Q6X4U4 206 aa6.94□□□□□ -1.3
SNX22-206ENST00000560997 ITPR2Q14571 2701 aa6.94□□□□□ -1.3
SNX22-206ENST00000560997 KMT2BQ9UMN6 2715 aaPredicted RBP6.94□□□□□ -1.3
SNX22-206ENST00000560997 F5H768 121 aa6.94□□□□□ -1.3
SNX22-206ENST00000560997 FAM19A3Q7Z5A8 133 aa6.94□□□□□ -1.3
SNX22-206ENST00000560997 RNF183Q96D59 192 aa6.94□□□□□ -1.3
SNX22-206ENST00000560997 TRGV2A0A075B6R0 118 aa6.93□□□□□ -1.3
SNX22-206ENST00000560997 COX6CP09669 75 aa6.93□□□□□ -1.3
SNX22-206ENST00000560997 CIRBPQ14011 172 aaKnown RBP6.93□□□□□ -1.3
SNX22-206ENST00000560997 C2orf82Q6UX34 121 aa6.93□□□□□ -1.3
SNX22-206ENST00000560997 C19orf73Q9NVV2 129 aa6.93□□□□□ -1.3
SNX22-206ENST00000560997 FN1P02751 2386 aaKnown RBP6.93□□□□□ -1.3
SNX22-206ENST00000560997 CKS1BP61024 79 aa6.93□□□□□ -1.3
SNX22-206ENST00000560997 PRIMA1Q86XR5 153 aa6.92□□□□□ -1.3
SNX22-206ENST00000560997 LST1O00453 97 aa6.92□□□□□ -1.3
SNX22-206ENST00000560997 TMEM243Q9BU79 118 aa6.92□□□□□ -1.3
SNX22-206ENST00000560997 A0A1B0GV72 72 aa6.92□□□□□ -1.3
SNX22-206ENST00000560997 UBE2L6O14933 153 aa6.92□□□□□ -1.3
SNX22-206ENST00000560997 MEIG1Q5JSS6 88 aa6.92□□□□□ -1.3
SNX22-206ENST00000560997 UBE2WQ96B02 151 aa6.92□□□□□ -1.3
SNX22-206ENST00000560997 C16orf74Q96GX8 76 aa6.92□□□□□ -1.3
SNX22-206ENST00000560997 LINC01600Q96MT4 127 aa6.92□□□□□ -1.3
SNX22-206ENST00000560997 TMEM262E9PQX1 116 aa6.91□□□□□ -1.3
SNX22-206ENST00000560997 IGLV1-51P01701 117 aa6.91□□□□□ -1.3
SNX22-206ENST00000560997 TEX29Q8N6K0 151 aa6.91□□□□□ -1.3
SNX22-206ENST00000560997 CSNK1G2-AS1Q8NCQ2 148 aa6.91□□□□□ -1.3
SNX22-206ENST00000560997 IGKV3OR2-268A0A0C4DH90 116 aa6.91□□□□□ -1.3
SNX22-206ENST00000560997 RNASE1P07998 156 aaKnown RBP6.9□□□□□ -1.3
SNX22-206ENST00000560997 GAGE6Q13070 117 aa6.9□□□□□ -1.3
SNX22-206ENST00000560997 TRGV4A0A0C4DH28 118 aa6.9□□□□□ -1.31
SNX22-206ENST00000560997 C16orf95Q9H693 158 aa6.89□□□□□ -1.31
SNX22-206ENST00000560997 IGLV4-60A0A075B6I1 120 aa6.89□□□□□ -1.31
SNX22-206ENST00000560997 TRBV6-4A0A1B0GX49 114 aa6.89□□□□□ -1.31
SNX22-206ENST00000560997 H3BT86 120 aa6.89□□□□□ -1.31
SNX22-206ENST00000560997 CRLF1O75462 422 aa6.89□□□□□ -1.31
SNX22-206ENST00000560997 GCN1Q92616 2671 aaKnown RBP6.89□□□□□ -1.31
SNX22-206ENST00000560997 TRAV8-4A0A0B4J246 113 aa6.89□□□□□ -1.31
SNX22-206ENST00000560997 CITED1Q99966 193 aa6.88□□□□□ -1.31
SNX22-206ENST00000560997 OVOL2Q9BRP0 275 aa6.88□□□□□ -1.31
SNX22-206ENST00000560997 CMC4P56277 68 aaPredicted RBP6.88□□□□□ -1.31
SNX22-206ENST00000560997 FHL2Q14192 279 aa6.88□□□□□ -1.31
SNX22-206ENST00000560997 TOMM7Q9P0U1 55 aa6.88□□□□□ -1.31
SNX22-206ENST00000560997 SHISA2Q6UWI4 295 aa6.87□□□□□ -1.31
SNX22-206ENST00000560997 FAM110AQ9BQ89 295 aa6.87□□□□□ -1.31
SNX22-206ENST00000560997 NBEAL2Q6ZNJ1 2754 aa6.87□□□□□ -1.31
SNX22-206ENST00000560997 HERV-K104P63124 156 aa6.87□□□□□ -1.31
SNX22-206ENST00000560997 TRBV6-8A0A0A6YYG3 113 aa6.86□□□□□ -1.31
SNX22-206ENST00000560997 COX7A2LO14548 114 aa6.86□□□□□ -1.31
SNX22-206ENST00000560997 COX7B2Q8TF08 81 aa6.86□□□□□ -1.31
SNX22-206ENST00000560997 HELZ2Q9BYK8 2649 aaKnown RBP6.86□□□□□ -1.31
SNX22-206ENST00000560997 DEFB130BP0DP73 79 aa6.86□□□□□ -1.31
SNX22-206ENST00000560997 DEFB130AP0DP74 79 aa6.86□□□□□ -1.31
SNX22-206ENST00000560997 CHCHD5Q9BSY4 110 aa6.86□□□□□ -1.31
SNX22-206ENST00000560997 UNC79Q9P2D8 2635 aa6.86□□□□□ -1.31
SNX22-206ENST00000560997 SNCGO76070 127 aa6.85□□□□□ -1.31
SNX22-206ENST00000560997 MIR7-3HGQ8N6C7 128 aa6.85□□□□□ -1.31
SNX22-206ENST00000560997 FASNP49327 2511 aaKnown RBP6.85□□□□□ -1.31
SNX22-206ENST00000560997 KRTAP10-3P60369 221 aa6.85□□□□□ -1.31
SNX22-206ENST00000560997 COPS9Q8WXC6 57 aa6.85□□□□□ -1.31
SNX22-206ENST00000560997 HIVEP2P31629 2446 aa6.85□□□□□ -1.31
SNX22-206ENST00000560997 PF4P02776 101 aa6.85□□□□□ -1.31
SNX22-206ENST00000560997 C15orf53Q8NAA6 179 aa6.85□□□□□ -1.31
SNX22-206ENST00000560997 FAM218AQ96MZ4 157 aa6.85□□□□□ -1.31
SNX22-206ENST00000560997 SMR3AQ99954 134 aa6.85□□□□□ -1.31
SNX22-206ENST00000560997 VWFP04275 2813 aa6.84□□□□□ -1.31
SNX22-206ENST00000560997 IGHV3OR16-9A0A0B4J2B5 98 aa6.84□□□□□ -1.31
SNX22-206ENST00000560997 TRAV26-1A0A087WT03 109 aa6.84□□□□□ -1.31
SNX22-206ENST00000560997 HILS1P60008 231 aa6.84□□□□□ -1.31
SNX22-206ENST00000560997 TTC32Q5I0X7 151 aa6.84□□□□□ -1.31
SNX22-206ENST00000560997 C5orf38Q86SI9 138 aa6.84□□□□□ -1.31
SNX22-206ENST00000560997 LINC00337Q8N6G1 96 aa6.83□□□□□ -1.32
SNX22-206ENST00000560997 DEFB121Q5J5C9 76 aa6.83□□□□□ -1.32
SNX22-206ENST00000560997 NOTCH2Q04721 2471 aa6.83□□□□□ -1.32
SNX22-206ENST00000560997 IGKV2-28A0A075B6P5 120 aa6.83□□□□□ -1.32
SNX22-206ENST00000560997 IGKV2D-28P01615 120 aa6.83□□□□□ -1.32
SNX22-206ENST00000560997 GAGE2BQ13066 116 aa6.83□□□□□ -1.32
SNX22-206ENST00000560997 GAGE2EQ4V326 116 aa6.83□□□□□ -1.32
SNX22-206ENST00000560997 ANAPC13Q9BS18 74 aa6.83□□□□□ -1.32
SNX22-206ENST00000560997 GAGE2DQ9UEU5 116 aa6.83□□□□□ -1.32
SNX22-206ENST00000560997 LINC00158P58513 81 aa6.82□□□□□ -1.32
SNX22-206ENST00000560997 C11orf68Q9H3H3 251 aaKnown RBP6.82□□□□□ -1.32
SNX22-206ENST00000560997 SND1-IT1Q9HBX3 110 aa6.82□□□□□ -1.32
SNX22-206ENST00000560997 A0A096LPF7 62 aa6.82□□□□□ -1.32
SNX22-206ENST00000560997 GYPEP15421 78 aa6.82□□□□□ -1.32
SNX22-206ENST00000560997 TNP2Q05952 138 aa6.82□□□□□ -1.32
SNX22-206ENST00000560997 SPATA3Q8NHX4 192 aa6.82□□□□□ -1.32
SNX22-206ENST00000560997 A0A087WZ39 114 aa6.81□□□□□ -1.32
SNX22-206ENST00000560997 CRPP02741 224 aa6.81□□□□□ -1.32
SNX22-206ENST00000560997 LINC00959A0A1B0GUT2 108 aa6.81□□□□□ -1.32
SNX22-206ENST00000560997 NHLRC4P0CG21 123 aaPredicted RBP6.81□□□□□ -1.32
SNX22-206ENST00000560997 PFN2P35080 140 aa6.81□□□□□ -1.32
SNX22-206ENST00000560997 CLPSL2Q6UWE3 100 aa6.81□□□□□ -1.32
SNX22-206ENST00000560997 C22orf24Q9Y442 160 aa6.81□□□□□ -1.32
SNX22-206ENST00000560997 CCL18P55774 89 aa6.8□□□□□ -1.32
SNX22-206ENST00000560997 Q9HAA7 133 aa6.8□□□□□ -1.32
SNX22-206ENST00000560997 TRAV13-2A0A0B4J235 113 aa6.8□□□□□ -1.32
SNX22-206ENST00000560997 TRACP01848 142 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms