RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 TRAV8-3A0A0A6YYJ7 113 aa8.67□□□□□ -1.02
CACNB3-223ENST00000552480 EREGO14944 169 aa8.67□□□□□ -1.02
CACNB3-223ENST00000552480 LINC00269Q8N2A0 174 aa8.67□□□□□ -1.02
CACNB3-223ENST00000552480 Q8N3U1 123 aa8.67□□□□□ -1.02
CACNB3-223ENST00000552480 TENM3Q9P273 2699 aa8.67□□□□□ -1.02
CACNB3-223ENST00000552480 IGLV5-39A0A0G2JS06 123 aa8.66□□□□□ -1.02
CACNB3-223ENST00000552480 SMIM1B2RUZ4 78 aa8.66□□□□□ -1.02
CACNB3-223ENST00000552480 REG3AQ06141 175 aa8.66□□□□□ -1.02
CACNB3-223ENST00000552480 HSD52Q0P140 79 aa8.66□□□□□ -1.02
CACNB3-223ENST00000552480 WFDC10BQ8IUB3 73 aa8.66□□□□□ -1.02
CACNB3-223ENST00000552480 HINT1P49773 126 aaPredicted RBP8.65□□□□□ -1.02
CACNB3-223ENST00000552480 CLPSL2Q6UWE3 100 aa8.65□□□□□ -1.02
CACNB3-223ENST00000552480 IGHV3OR16-9A0A0B4J2B5 98 aa8.64□□□□□ -1.03
CACNB3-223ENST00000552480 IGLL5B9A064 214 aa8.64□□□□□ -1.03
CACNB3-223ENST00000552480 IGHV3-30P01768 117 aa8.64□□□□□ -1.03
CACNB3-223ENST00000552480 IGHV3-33P01772 117 aa8.64□□□□□ -1.03
CACNB3-223ENST00000552480 IGHV3-30-5P0DP03 117 aa8.64□□□□□ -1.03
CACNB3-223ENST00000552480 BATFQ16520 125 aa8.64□□□□□ -1.03
CACNB3-223ENST00000552480 LBHQ53QV2 105 aaPredicted RBP8.64□□□□□ -1.03
CACNB3-223ENST00000552480 ZFAND6Q6FIF0 208 aa8.64□□□□□ -1.03
CACNB3-223ENST00000552480 SCGB1D4Q6XE38 83 aa8.64□□□□□ -1.03
CACNB3-223ENST00000552480 PRR34Q9NV39 138 aa8.64□□□□□ -1.03
CACNB3-223ENST00000552480 DNAH9Q9NYC9 4486 aa8.63□□□□□ -1.03
CACNB3-223ENST00000552480 A0A087WZ39 114 aa8.63□□□□□ -1.03
CACNB3-223ENST00000552480 TAL2Q16559 108 aa8.63□□□□□ -1.03
CACNB3-223ENST00000552480 BVES-AS1Q5T3Y7 98 aa8.63□□□□□ -1.03
CACNB3-223ENST00000552480 LINC01561Q8N1V8 128 aa8.63□□□□□ -1.03
CACNB3-223ENST00000552480 KLK12Q9UKR0 248 aa8.63□□□□□ -1.03
CACNB3-223ENST00000552480 XCL1P47992 114 aa8.62□□□□□ -1.03
CACNB3-223ENST00000552480 LINC01556Q5JQF7 62 aa8.62□□□□□ -1.03
CACNB3-223ENST00000552480 CD164L2Q6UWJ8 174 aa8.62□□□□□ -1.03
CACNB3-223ENST00000552480 CHCHD10Q8WYQ3 142 aaPredicted RBP8.62□□□□□ -1.03
CACNB3-223ENST00000552480 NDUFA12Q9UI09 145 aa8.62□□□□□ -1.03
CACNB3-223ENST00000552480 NDUFA1O15239 70 aa8.61□□□□□ -1.03
CACNB3-223ENST00000552480 CRPP02741 224 aa8.61□□□□□ -1.03
CACNB3-223ENST00000552480 CCL18P55774 89 aa8.61□□□□□ -1.03
CACNB3-223ENST00000552480 ENHOQ6UWT2 76 aa8.61□□□□□ -1.03
CACNB3-223ENST00000552480 C5orf38Q86SI9 138 aa8.61□□□□□ -1.03
CACNB3-223ENST00000552480 LINC00588Q9Y4M8 146 aa8.61□□□□□ -1.03
CACNB3-223ENST00000552480 A0A0J9YXY3 114 aa8.6□□□□□ -1.03
CACNB3-223ENST00000552480 C10orf126Q8N4M7 172 aa8.6□□□□□ -1.03
CACNB3-223ENST00000552480 COX7B2Q8TF08 81 aa8.6□□□□□ -1.03
CACNB3-223ENST00000552480 HIST1H4GQ99525 98 aa8.6□□□□□ -1.03
CACNB3-223ENST00000552480 SPANXB1Q9NS25 103 aaPredicted RBP8.6□□□□□ -1.03
CACNB3-223ENST00000552480 IGLV10-54A0A075B6I4 117 aa8.59□□□□□ -1.03
CACNB3-223ENST00000552480 TRAV8-4A0A0B4J246 113 aa8.59□□□□□ -1.03
CACNB3-223ENST00000552480 DNAH10OSP0CZ25 163 aa8.59□□□□□ -1.03
CACNB3-223ENST00000552480 COL5A1-AS1Q5SY13 56 aa8.59□□□□□ -1.03
CACNB3-223ENST00000552480 ORAOV1Q8WV07 137 aa8.59□□□□□ -1.03
CACNB3-223ENST00000552480 NUPR2A6NF83 97 aa8.58□□□□□ -1.04
CACNB3-223ENST00000552480 COX7A2LO14548 114 aa8.58□□□□□ -1.04
CACNB3-223ENST00000552480 FOXI1Q12951 378 aa8.58□□□□□ -1.04
CACNB3-223ENST00000552480 MIAQ16674 131 aa8.58□□□□□ -1.04
CACNB3-223ENST00000552480 CEND1Q8N111 149 aa8.58□□□□□ -1.04
CACNB3-223ENST00000552480 UBE2WQ96B02 151 aa8.58□□□□□ -1.04
CACNB3-223ENST00000552480 UPK3BQ9BT76 320 aa8.58□□□□□ -1.04
CACNB3-223ENST00000552480 APLNQ9ULZ1 77 aa8.58□□□□□ -1.04
CACNB3-223ENST00000552480 GAGE12HA6NDE8 117 aa8.57□□□□□ -1.04
CACNB3-223ENST00000552480 TMEM238C9JI98 176 aa8.57□□□□□ -1.04
CACNB3-223ENST00000552480 GCSHP23434 173 aa8.57□□□□□ -1.04
CACNB3-223ENST00000552480 HERV-K104P63124 156 aa8.57□□□□□ -1.04
CACNB3-223ENST00000552480 ZNF625Q96I27 306 aaPredicted RBP8.57□□□□□ -1.04
CACNB3-223ENST00000552480 TM2D2Q9BX73 214 aa8.57□□□□□ -1.04
CACNB3-223ENST00000552480 Q9H8V8 135 aa8.57□□□□□ -1.04
CACNB3-223ENST00000552480 A6NDN8 102 aa8.56□□□□□ -1.04
CACNB3-223ENST00000552480 TIMM17BO60830 172 aa8.56□□□□□ -1.04
CACNB3-223ENST00000552480 SRSF9Q13242 221 aaKnown RBP eCLIP8.56□□□□□ -1.04
CACNB3-223ENST00000552480 TOMM7Q9P0U1 55 aa8.56□□□□□ -1.04
CACNB3-223ENST00000552480 KLK5Q9Y337 293 aaPredicted RBP8.56□□□□□ -1.04
CACNB3-223ENST00000552480 MALP21145 153 aa8.55□□□□□ -1.04
CACNB3-223ENST00000552480 FXYD2P54710 66 aa8.55□□□□□ -1.04
CACNB3-223ENST00000552480 SFTA2Q6UW10 78 aa8.55□□□□□ -1.04
CACNB3-223ENST00000552480 Q8IZM0 81 aa8.55□□□□□ -1.04
CACNB3-223ENST00000552480 LITAFQ99732 161 aa8.55□□□□□ -1.04
CACNB3-223ENST00000552480 SPANXDQ9BXN6 97 aa8.54□□□□□ -1.04
CACNB3-223ENST00000552480 SPANXCQ9NY87 97 aa8.54□□□□□ -1.04
CACNB3-223ENST00000552480 APOMO95445 188 aa8.53□□□□□ -1.04
CACNB3-223ENST00000552480 PRSS2P07478 247 aa8.53□□□□□ -1.04
CACNB3-223ENST00000552480 PTTG1IPP53801 180 aa8.53□□□□□ -1.04
CACNB3-223ENST00000552480 CIRBPQ14011 172 aaKnown RBP8.53□□□□□ -1.04
CACNB3-223ENST00000552480 IBA57-AS1B1ANH7 110 aa8.52□□□□□ -1.05
CACNB3-223ENST00000552480 C6orf226Q5I0X4 101 aa8.52□□□□□ -1.05
CACNB3-223ENST00000552480 KRTAP26-1Q6PEX3 210 aa8.52□□□□□ -1.05
CACNB3-223ENST00000552480 Q6ZVH6 145 aa8.52□□□□□ -1.05
CACNB3-223ENST00000552480 C1orf43Q9BWL3 253 aa8.52□□□□□ -1.05
CACNB3-223ENST00000552480 TMEM238LA0A1B0GVL6 79 aa8.51□□□□□ -1.05
CACNB3-223ENST00000552480 A6NJY4 79 aa8.51□□□□□ -1.05
CACNB3-223ENST00000552480 K7EP13 123 aa8.51□□□□□ -1.05
CACNB3-223ENST00000552480 CXCL5P42830 114 aa8.51□□□□□ -1.05
CACNB3-223ENST00000552480 KIAA0087Q14695 138 aa8.51□□□□□ -1.05
CACNB3-223ENST00000552480 MEIG1Q5JSS6 88 aa8.51□□□□□ -1.05
CACNB3-223ENST00000552480 ADAMTSL4-AS1Q5T5F5 129 aa8.51□□□□□ -1.05
CACNB3-223ENST00000552480 CFAP161Q6P656 301 aa8.51□□□□□ -1.05
CACNB3-223ENST00000552480 UBE2DNLQ8IWF7 75 aa8.51□□□□□ -1.05
CACNB3-223ENST00000552480 DYNC2H1Q8NCM8 4307 aaKnown RBP8.51□□□□□ -1.05
CACNB3-223ENST00000552480 IFITM1P13164 125 aa8.5□□□□□ -1.05
CACNB3-223ENST00000552480 NHP2Q9NX24 153 aaKnown RBP8.5□□□□□ -1.05
CACNB3-223ENST00000552480 IGKV2D-24A0A075B6R9 120 aa8.49□□□□□ -1.05
CACNB3-223ENST00000552480 A0A1B0GWB2 263 aa8.49□□□□□ -1.05
CACNB3-223ENST00000552480 TAX1BP3O14907 124 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms