RNA–Protein interactions for RNA: ENST00000544907.6

TNFAIP1-202, Transcript of TNF alpha induced protein 1, humanhuman

TSL 2 BASIC

Gene TNFAIP1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-202ENST00000544907 M0QXV9 152 aa12.76□□□□□ -0.37
TNFAIP1-202ENST00000544907 CIRBPQ14011 172 aaKnown RBP12.76□□□□□ -0.37
TNFAIP1-202ENST00000544907 EIF4EBP3O60516 100 aaPredicted RBP12.74□□□□□ -0.37
TNFAIP1-202ENST00000544907 COX6A2Q02221 97 aa12.74□□□□□ -0.37
TNFAIP1-202ENST00000544907 WNK1Q9H4A3 2382 aa12.74□□□□□ -0.37
TNFAIP1-202ENST00000544907 SMIM1B2RUZ4 78 aa12.73□□□□□ -0.37
TNFAIP1-202ENST00000544907 PSMB2P49721 201 aa12.73□□□□□ -0.37
TNFAIP1-202ENST00000544907 ADAMTSL4-AS1Q5T5F5 129 aa12.73□□□□□ -0.37
TNFAIP1-202ENST00000544907 TRBV6-8A0A0A6YYG3 113 aa12.73□□□□□ -0.37
TNFAIP1-202ENST00000544907 TRBV30A0A0K0K1B3 111 aa12.73□□□□□ -0.37
TNFAIP1-202ENST00000544907 HERV-K104P63124 156 aa12.73□□□□□ -0.37
TNFAIP1-202ENST00000544907 F5H768 121 aa12.72□□□□□ -0.37
TNFAIP1-202ENST00000544907 TCL1BO95988 128 aa12.72□□□□□ -0.37
TNFAIP1-202ENST00000544907 CITED1Q99966 193 aa12.72□□□□□ -0.37
TNFAIP1-202ENST00000544907 PRSS2P07478 247 aa12.71□□□□□ -0.37
TNFAIP1-202ENST00000544907 ETDBQ3ZM63 59 aa12.71□□□□□ -0.37
TNFAIP1-202ENST00000544907 TENM1Q9UKZ4 2725 aa12.71□□□□□ -0.38
TNFAIP1-202ENST00000544907 SCGB1C2P0DMR2 95 aa12.7□□□□□ -0.38
TNFAIP1-202ENST00000544907 PCP4P48539 62 aa12.7□□□□□ -0.38
TNFAIP1-202ENST00000544907 SHISA2Q6UWI4 295 aa12.7□□□□□ -0.38
TNFAIP1-202ENST00000544907 LINC01600Q96MT4 127 aa12.7□□□□□ -0.38
TNFAIP1-202ENST00000544907 TRAV13-1A0A0B4J241 112 aa12.7□□□□□ -0.38
TNFAIP1-202ENST00000544907 LYRM9A8MSI8 78 aa12.7□□□□□ -0.38
TNFAIP1-202ENST00000544907 A8MZ25 164 aa12.7□□□□□ -0.38
TNFAIP1-202ENST00000544907 ZNF625Q96I27 306 aaPredicted RBP12.7□□□□□ -0.38
TNFAIP1-202ENST00000544907 X6R8D5 127 aa12.7□□□□□ -0.38
TNFAIP1-202ENST00000544907 SMCPP49901 116 aaPredicted RBP12.69□□□□□ -0.38
TNFAIP1-202ENST00000544907 STAB1Q9NY15 2570 aa12.68□□□□□ -0.38
TNFAIP1-202ENST00000544907 LOC100131303A0A0U1RQF7 123 aa12.68□□□□□ -0.38
TNFAIP1-202ENST00000544907 Q9H8V8 135 aa12.68□□□□□ -0.38
TNFAIP1-202ENST00000544907 SH2D6Q7Z4S9 175 aa12.67□□□□□ -0.38
TNFAIP1-202ENST00000544907 APOC4P55056 127 aa12.67□□□□□ -0.38
TNFAIP1-202ENST00000544907 SPATA3Q8NHX4 192 aa12.67□□□□□ -0.38
TNFAIP1-202ENST00000544907 ATXN8Q156A1 80 aa12.66□□□□□ -0.38
TNFAIP1-202ENST00000544907 TEN1Q86WV5 123 aa12.66□□□□□ -0.38
TNFAIP1-202ENST00000544907 SFTA2Q6UW10 78 aa12.65□□□□□ -0.38
TNFAIP1-202ENST00000544907 PRO0255Q9UI72 69 aa12.65□□□□□ -0.38
TNFAIP1-202ENST00000544907 A0A1B0GUV1 79 aa12.64□□□□□ -0.39
TNFAIP1-202ENST00000544907 WIPF1O43516 503 aa12.64□□□□□ -0.39
TNFAIP1-202ENST00000544907 COX6CP09669 75 aa12.64□□□□□ -0.39
TNFAIP1-202ENST00000544907 FOXI1Q12951 378 aa12.64□□□□□ -0.39
TNFAIP1-202ENST00000544907 Q1RN00 199 aa12.64□□□□□ -0.39
TNFAIP1-202ENST00000544907 LINC00308Q8TCZ7 52 aa12.64□□□□□ -0.39
TNFAIP1-202ENST00000544907 DEFB130BP0DP73 79 aa12.63□□□□□ -0.39
TNFAIP1-202ENST00000544907 DEFB130AP0DP74 79 aa12.63□□□□□ -0.39
TNFAIP1-202ENST00000544907 WFDC9Q8NEX5 89 aa12.63□□□□□ -0.39
TNFAIP1-202ENST00000544907 PPDPFLQ8WWR9 84 aa12.63□□□□□ -0.39
TNFAIP1-202ENST00000544907 SPATA25Q9BR10 227 aa12.63□□□□□ -0.39
TNFAIP1-202ENST00000544907 CHCHD5Q9BSY4 110 aa12.63□□□□□ -0.39
TNFAIP1-202ENST00000544907 ICOSQ9Y6W8 199 aa12.63□□□□□ -0.39
TNFAIP1-202ENST00000544907 GAGE6Q13070 117 aa12.62□□□□□ -0.39
TNFAIP1-202ENST00000544907 MTURNQ8N3F0 131 aa12.62□□□□□ -0.39
TNFAIP1-202ENST00000544907 IGHV3OR16-9A0A0B4J2B5 98 aa12.61□□□□□ -0.39
TNFAIP1-202ENST00000544907 TRIAP1O43715 76 aa12.61□□□□□ -0.39
TNFAIP1-202ENST00000544907 GYPEP15421 78 aa12.61□□□□□ -0.39
TNFAIP1-202ENST00000544907 LINC01561Q8N1V8 128 aa12.61□□□□□ -0.39
TNFAIP1-202ENST00000544907 A0A087WZ39 114 aa12.6□□□□□ -0.39
TNFAIP1-202ENST00000544907 SLC25A20O43772 301 aa12.6□□□□□ -0.39
TNFAIP1-202ENST00000544907 COX7B2Q8TF08 81 aa12.6□□□□□ -0.39
TNFAIP1-202ENST00000544907 IGLV4-60A0A075B6I1 120 aa12.59□□□□□ -0.39
TNFAIP1-202ENST00000544907 H7C2G1 150 aa12.59□□□□□ -0.39
TNFAIP1-202ENST00000544907 ANK2Q01484 3957 aa12.58□□□□□ -0.39
TNFAIP1-202ENST00000544907 GAGE12HA6NDE8 117 aa12.58□□□□□ -0.4
TNFAIP1-202ENST00000544907 LINC01620Q4KN68 170 aa12.58□□□□□ -0.4
TNFAIP1-202ENST00000544907 MEIG1Q5JSS6 88 aa12.58□□□□□ -0.4
TNFAIP1-202ENST00000544907 TRAV26-1A0A087WT03 109 aa12.57□□□□□ -0.4
TNFAIP1-202ENST00000544907 MIFP14174 115 aa12.57□□□□□ -0.4
TNFAIP1-202ENST00000544907 FAM222AQ5U5X8 452 aa12.57□□□□□ -0.4
TNFAIP1-202ENST00000544907 TRBV10-2A0A0K0K1G8 114 aa12.57□□□□□ -0.4
TNFAIP1-202ENST00000544907 C9JAW5 83 aa12.57□□□□□ -0.4
TNFAIP1-202ENST00000544907 RPL13AP40429 203 aaKnown RBP12.57□□□□□ -0.4
TNFAIP1-202ENST00000544907 ANKRD29Q8N6D5 301 aa12.56□□□□□ -0.4
TNFAIP1-202ENST00000544907 LINC00959A0A1B0GUT2 108 aa12.55□□□□□ -0.4
TNFAIP1-202ENST00000544907 PAX4O43316 350 aa12.55□□□□□ -0.4
TNFAIP1-202ENST00000544907 SCGB1A1P11684 91 aa12.55□□□□□ -0.4
TNFAIP1-202ENST00000544907 DAND5Q8N907 189 aa12.55□□□□□ -0.4
TNFAIP1-202ENST00000544907 SIGMAR1Q99720 223 aa12.55□□□□□ -0.4
TNFAIP1-202ENST00000544907 NPC2P61916 151 aa12.54□□□□□ -0.4
TNFAIP1-202ENST00000544907 NOTCH3Q9UM47 2321 aa12.54□□□□□ -0.4
TNFAIP1-202ENST00000544907 IBA57-AS1B1ANH7 110 aa12.54□□□□□ -0.4
TNFAIP1-202ENST00000544907 H3BT86 120 aa12.54□□□□□ -0.4
TNFAIP1-202ENST00000544907 LST1O00453 97 aa12.54□□□□□ -0.4
TNFAIP1-202ENST00000544907 SS18Q15532 418 aa12.53□□□□□ -0.4
TNFAIP1-202ENST00000544907 SOSTDC1Q6X4U4 206 aa12.53□□□□□ -0.4
TNFAIP1-202ENST00000544907 CARD19Q96LW7 228 aa12.53□□□□□ -0.4
TNFAIP1-202ENST00000544907 IGHV4-28A0A0C4DH34 117 aa12.52□□□□□ -0.4
TNFAIP1-202ENST00000544907 DEFB135Q30KP9 77 aa12.52□□□□□ -0.4
TNFAIP1-202ENST00000544907 Q8NAQ8 132 aa12.52□□□□□ -0.4
TNFAIP1-202ENST00000544907 ATP5G1P05496 136 aa12.51□□□□□ -0.41
TNFAIP1-202ENST00000544907 DAD1P61803 113 aa12.51□□□□□ -0.41
TNFAIP1-202ENST00000544907 DNHD1Q96M86 4753 aa12.5□□□□□ -0.41
TNFAIP1-202ENST00000544907 TRAV13-2A0A0B4J235 113 aa12.5□□□□□ -0.41
TNFAIP1-202ENST00000544907 TMEM262E9PQX1 116 aa12.5□□□□□ -0.41
TNFAIP1-202ENST00000544907 COX7A2LO14548 114 aa12.49□□□□□ -0.41
TNFAIP1-202ENST00000544907 SPART-AS1P0CW21 52 aa12.48□□□□□ -0.41
TNFAIP1-202ENST00000544907 Q8IZM0 81 aa12.48□□□□□ -0.41
TNFAIP1-202ENST00000544907 TRRAPQ9Y4A5 3859 aa12.48□□□□□ -0.41
TNFAIP1-202ENST00000544907 IGKV3OR2-268A0A0C4DH90 116 aa12.47□□□□□ -0.41
TNFAIP1-202ENST00000544907 VWFP04275 2813 aa12.47□□□□□ -0.41
TNFAIP1-202ENST00000544907 MIR7-3HGQ8N6C7 128 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms