RNA–Protein interactions for RNA: ENST00000543155.5

COPS7A-215, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-215ENST00000543155 FHL2Q14192 279 aa13.16□□□□□ -0.3
COPS7A-215ENST00000543155 ZNF625Q96I27 306 aaPredicted RBP13.16□□□□□ -0.3
COPS7A-215ENST00000543155 PF4P02776 101 aa13.15□□□□□ -0.3
COPS7A-215ENST00000543155 LINC01600Q96MT4 127 aa13.15□□□□□ -0.3
COPS7A-215ENST00000543155 KRTAP10-3P60369 221 aa13.15□□□□□ -0.3
COPS7A-215ENST00000543155 HERV-K104P63124 156 aa13.15□□□□□ -0.3
COPS7A-215ENST00000543155 PRIMA1Q86XR5 153 aa13.15□□□□□ -0.3
COPS7A-215ENST00000543155 CDIP1Q9H305 208 aa13.15□□□□□ -0.3
COPS7A-215ENST00000543155 TRBV10-2A0A0K0K1G8 114 aa13.13□□□□□ -0.31
COPS7A-215ENST00000543155 LINC00482Q8N8I6 264 aa13.13□□□□□ -0.31
COPS7A-215ENST00000543155 MEIG1Q5JSS6 88 aa13.13□□□□□ -0.31
COPS7A-215ENST00000543155 TRBV6-8A0A0A6YYG3 113 aa13.12□□□□□ -0.31
COPS7A-215ENST00000543155 GAGE6Q13070 117 aa13.12□□□□□ -0.31
COPS7A-215ENST00000543155 SMR3AQ99954 134 aa13.12□□□□□ -0.31
COPS7A-215ENST00000543155 ACANP16112 2415 aa13.12□□□□□ -0.31
COPS7A-215ENST00000543155 A0A0U1RRA0 63 aa13.1□□□□□ -0.31
COPS7A-215ENST00000543155 KIR2DL5BQ8NHK3 375 aa13.1□□□□□ -0.31
COPS7A-215ENST00000543155 NIPBLQ6KC79 2804 aaeCLIP13.09□□□□□ -0.31
COPS7A-215ENST00000543155 CRLF1O75462 422 aa13.09□□□□□ -0.31
COPS7A-215ENST00000543155 LINC00612Q8N6U2 182 aa13.09□□□□□ -0.31
COPS7A-215ENST00000543155 PPDPFQ9H3Y8 114 aa13.09□□□□□ -0.31
COPS7A-215ENST00000543155 JMJD1CQ15652 2540 aa13.09□□□□□ -0.31
COPS7A-215ENST00000543155 LST1O00453 97 aa13.09□□□□□ -0.31
COPS7A-215ENST00000543155 SOSTDC1Q6X4U4 206 aa13.09□□□□□ -0.31
COPS7A-215ENST00000543155 NTN5Q8WTR8 489 aaPredicted RBP13.09□□□□□ -0.31
COPS7A-215ENST00000543155 CLEC2BQ92478 149 aa13.09□□□□□ -0.31
COPS7A-215ENST00000543155 CHCHD5Q9BSY4 110 aa13.09□□□□□ -0.31
COPS7A-215ENST00000543155 SETD2Q9BYW2 2564 aaPredicted RBP13.08□□□□□ -0.32
COPS7A-215ENST00000543155 DEFB130BP0DP73 79 aa13.07□□□□□ -0.32
COPS7A-215ENST00000543155 DEFB130AP0DP74 79 aa13.07□□□□□ -0.32
COPS7A-215ENST00000543155 COX7B2Q8TF08 81 aa13.07□□□□□ -0.32
COPS7A-215ENST00000543155 NOTCH3Q9UM47 2321 aa13.07□□□□□ -0.32
COPS7A-215ENST00000543155 IGLV4-60A0A075B6I1 120 aa13.07□□□□□ -0.32
COPS7A-215ENST00000543155 TMEM262E9PQX1 116 aa13.07□□□□□ -0.32
COPS7A-215ENST00000543155 H3BT86 120 aa13.07□□□□□ -0.32
COPS7A-215ENST00000543155 MTORP42345 2549 aa13.07□□□□□ -0.32
COPS7A-215ENST00000543155 ITPR2Q14571 2701 aa13.07□□□□□ -0.32
COPS7A-215ENST00000543155 C2orf82Q6UX34 121 aa13.06□□□□□ -0.32
COPS7A-215ENST00000543155 LY6G6DO95868 133 aa13.06□□□□□ -0.32
COPS7A-215ENST00000543155 IGKV3OR2-268A0A0C4DH90 116 aa13.05□□□□□ -0.32
COPS7A-215ENST00000543155 UBE2WQ96B02 151 aa13.04□□□□□ -0.32
COPS7A-215ENST00000543155 KMT2BQ9UMN6 2715 aaPredicted RBP13.04□□□□□ -0.32
COPS7A-215ENST00000543155 UNC79Q9P2D8 2635 aa13.04□□□□□ -0.32
COPS7A-215ENST00000543155 SMIM9A6NGZ8 99 aa13.04□□□□□ -0.32
COPS7A-215ENST00000543155 XGP55808 180 aa13.04□□□□□ -0.32
COPS7A-215ENST00000543155 X6R8D5 127 aa13.04□□□□□ -0.32
COPS7A-215ENST00000543155 MT-ATP8P03928 68 aa13.03□□□□□ -0.32
COPS7A-215ENST00000543155 IGHV3OR16-9A0A0B4J2B5 98 aa13.02□□□□□ -0.33
COPS7A-215ENST00000543155 GYPEP15421 78 aa13.02□□□□□ -0.33
COPS7A-215ENST00000543155 SHISA2Q6UWI4 295 aa13.02□□□□□ -0.33
COPS7A-215ENST00000543155 TEX49A0A1B0GTD5 131 aa13.01□□□□□ -0.33
COPS7A-215ENST00000543155 COX7A2LO14548 114 aa13.01□□□□□ -0.33
COPS7A-215ENST00000543155 C9orf66Q5T8R8 295 aa13.01□□□□□ -0.33
COPS7A-215ENST00000543155 TOMM7Q9P0U1 55 aa13.01□□□□□ -0.33
COPS7A-215ENST00000543155 A0A087WZ39 114 aa13□□□□□ -0.33
COPS7A-215ENST00000543155 LINC00959A0A1B0GUT2 108 aa12.98□□□□□ -0.33
COPS7A-215ENST00000543155 PRO0255Q9UI72 69 aa12.98□□□□□ -0.33
COPS7A-215ENST00000543155 HIVEP2P31629 2446 aa12.98□□□□□ -0.33
COPS7A-215ENST00000543155 FAM222AQ5U5X8 452 aa12.98□□□□□ -0.33
COPS7A-215ENST00000543155 MIR7-3HGQ8N6C7 128 aa12.98□□□□□ -0.33
COPS7A-215ENST00000543155 HELZ2Q9BYK8 2649 aaKnown RBP12.97□□□□□ -0.33
COPS7A-215ENST00000543155 TRAV8-4A0A0B4J246 113 aa12.97□□□□□ -0.33
COPS7A-215ENST00000543155 LYRM9A8MSI8 78 aa12.97□□□□□ -0.33
COPS7A-215ENST00000543155 TRAV13-2A0A0B4J235 113 aa12.96□□□□□ -0.33
COPS7A-215ENST00000543155 A0A1B0GUV1 79 aa12.96□□□□□ -0.33
COPS7A-215ENST00000543155 C5orf38Q86SI9 138 aa12.96□□□□□ -0.33
COPS7A-215ENST00000543155 SPATA3Q8NHX4 192 aa12.95□□□□□ -0.34
COPS7A-215ENST00000543155 IBA57-AS1B1ANH7 110 aa12.95□□□□□ -0.34
COPS7A-215ENST00000543155 LINC00158P58513 81 aa12.95□□□□□ -0.34
COPS7A-215ENST00000543155 CRPP02741 224 aa12.94□□□□□ -0.34
COPS7A-215ENST00000543155 C2CD3Q4AC94 2353 aa12.94□□□□□ -0.34
COPS7A-215ENST00000543155 INAFM1C9JVW0 142 aa12.94□□□□□ -0.34
COPS7A-215ENST00000543155 SS18Q15532 418 aa12.94□□□□□ -0.34
COPS7A-215ENST00000543155 SND1-IT1Q9HBX3 110 aa12.94□□□□□ -0.34
COPS7A-215ENST00000543155 FASNP49327 2511 aaKnown RBP12.93□□□□□ -0.34
COPS7A-215ENST00000543155 A0A1B0GV72 72 aa12.93□□□□□ -0.34
COPS7A-215ENST00000543155 PAX4O43316 350 aa12.93□□□□□ -0.34
COPS7A-215ENST00000543155 DEFB121Q5J5C9 76 aa12.93□□□□□ -0.34
COPS7A-215ENST00000543155 TRACP01848 142 aa12.92□□□□□ -0.34
COPS7A-215ENST00000543155 APOC4P55056 127 aa12.92□□□□□ -0.34
COPS7A-215ENST00000543155 RPL28P46779 137 aaKnown RBP12.91□□□□□ -0.34
COPS7A-215ENST00000543155 DEFB135Q30KP9 77 aa12.91□□□□□ -0.34
COPS7A-215ENST00000543155 XCL1P47992 114 aa12.91□□□□□ -0.34
COPS7A-215ENST00000543155 LINC00337Q8N6G1 96 aa12.91□□□□□ -0.34
COPS7A-215ENST00000543155 IGKV2-28A0A075B6P5 120 aa12.9□□□□□ -0.34
COPS7A-215ENST00000543155 A0A096LPF7 62 aa12.9□□□□□ -0.34
COPS7A-215ENST00000543155 IGKV2D-28P01615 120 aa12.9□□□□□ -0.34
COPS7A-215ENST00000543155 CCL18P55774 89 aa12.9□□□□□ -0.34
COPS7A-215ENST00000543155 CKS1BP61024 79 aa12.89□□□□□ -0.35
COPS7A-215ENST00000543155 LINC01561Q8N1V8 128 aa12.89□□□□□ -0.35
COPS7A-215ENST00000543155 C6orf226Q5I0X4 101 aa12.89□□□□□ -0.35
COPS7A-215ENST00000543155 CITED1Q99966 193 aa12.89□□□□□ -0.35
COPS7A-215ENST00000543155 IGHV4-28A0A0C4DH34 117 aa12.88□□□□□ -0.35
COPS7A-215ENST00000543155 FAM240AA0A1B0GVK7 77 aa12.88□□□□□ -0.35
COPS7A-215ENST00000543155 SNCGO76070 127 aa12.88□□□□□ -0.35
COPS7A-215ENST00000543155 PFN2P35080 140 aa12.88□□□□□ -0.35
COPS7A-215ENST00000543155 Q8IZM0 81 aa12.88□□□□□ -0.35
COPS7A-215ENST00000543155 CLPSL2Q6UWE3 100 aa12.87□□□□□ -0.35
COPS7A-215ENST00000543155 DEFB4AO15263 64 aa12.86□□□□□ -0.35
COPS7A-215ENST00000543155 DAD1P61803 113 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms