RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 FAM19A3Q7Z5A8 133 aa8.32□□□□□ -1.08
USF1-208ENST00000528768 VSIG2Q96IQ7 327 aa8.32□□□□□ -1.08
USF1-208ENST00000528768 TM2D3Q9BRN9 247 aa8.32□□□□□ -1.08
USF1-208ENST00000528768 Q9UF83 564 aa8.32□□□□□ -1.08
USF1-208ENST00000528768 HERC2O95714 4834 aa8.31□□□□□ -1.08
USF1-208ENST00000528768 IGHV3-64A0A075B6Q5 118 aa8.31□□□□□ -1.08
USF1-208ENST00000528768 LYRM9A8MSI8 78 aa8.31□□□□□ -1.08
USF1-208ENST00000528768 IGHV3-30P01768 117 aa8.31□□□□□ -1.08
USF1-208ENST00000528768 IGHV3-30-5P0DP03 117 aa8.31□□□□□ -1.08
USF1-208ENST00000528768 CIRBPQ14011 172 aaKnown RBP8.31□□□□□ -1.08
USF1-208ENST00000528768 COPS9Q8WXC6 57 aa8.31□□□□□ -1.08
USF1-208ENST00000528768 NAA38Q9BRA0 125 aaKnown RBP8.31□□□□□ -1.08
USF1-208ENST00000528768 NACAE9PAV3 2078 aa8.31□□□□□ -1.08
USF1-208ENST00000528768 PCLOQ9Y6V0 5065 aa8.3□□□□□ -1.08
USF1-208ENST00000528768 IGLV5-45A0A087WSX0 123 aa8.3□□□□□ -1.08
USF1-208ENST00000528768 K7ERU9 68 aa8.3□□□□□ -1.08
USF1-208ENST00000528768 TIMM17BO60830 172 aa8.3□□□□□ -1.08
USF1-208ENST00000528768 FHL2Q14192 279 aa8.3□□□□□ -1.08
USF1-208ENST00000528768 RNASE13Q5GAN3 156 aaKnown RBP8.3□□□□□ -1.08
USF1-208ENST00000528768 FAM104AQ969W3 186 aa8.3□□□□□ -1.08
USF1-208ENST00000528768 NDUFA12Q9UI09 145 aa8.3□□□□□ -1.08
USF1-208ENST00000528768 A0A0J9YXY3 114 aa8.29□□□□□ -1.08
USF1-208ENST00000528768 APOMO95445 188 aa8.29□□□□□ -1.08
USF1-208ENST00000528768 NTM-AS1Q6ZSK4 140 aa8.29□□□□□ -1.08
USF1-208ENST00000528768 LINC00612Q8N6U2 182 aa8.29□□□□□ -1.08
USF1-208ENST00000528768 CDC42SE2Q9NRR3 84 aa8.29□□□□□ -1.08
USF1-208ENST00000528768 PGPEP1Q9NXJ5 209 aa8.29□□□□□ -1.08
USF1-208ENST00000528768 F8W1H4 67 aa8.28□□□□□ -1.08
USF1-208ENST00000528768 SPINK8P0C7L1 97 aa8.28□□□□□ -1.08
USF1-208ENST00000528768 DEFB130BP0DP73 79 aa8.28□□□□□ -1.08
USF1-208ENST00000528768 DEFB130AP0DP74 79 aa8.28□□□□□ -1.08
USF1-208ENST00000528768 IFITM1P13164 125 aa8.28□□□□□ -1.08
USF1-208ENST00000528768 SPANXDQ9BXN6 97 aa8.28□□□□□ -1.08
USF1-208ENST00000528768 SPANXCQ9NY87 97 aa8.28□□□□□ -1.08
USF1-208ENST00000528768 PRO1854Q9UHT4 67 aa8.28□□□□□ -1.08
USF1-208ENST00000528768 CBY1Q9Y3M2 126 aa8.28□□□□□ -1.08
USF1-208ENST00000528768 A0A0B4J2C4 111 aa8.27□□□□□ -1.09
USF1-208ENST00000528768 SPATA25Q9BR10 227 aa8.27□□□□□ -1.09
USF1-208ENST00000528768 CDKN2A-AS1Q9UH64 79 aa8.27□□□□□ -1.09
USF1-208ENST00000528768 PRO0255Q9UI72 69 aa8.27□□□□□ -1.09
USF1-208ENST00000528768 TRBV20-1A0A075B6N2 111 aa8.26□□□□□ -1.09
USF1-208ENST00000528768 TRBV6-8A0A0A6YYG3 113 aa8.26□□□□□ -1.09
USF1-208ENST00000528768 TRAV8-3A0A0A6YYJ7 113 aa8.26□□□□□ -1.09
USF1-208ENST00000528768 TRAV13-1A0A0B4J241 112 aa8.26□□□□□ -1.09
USF1-208ENST00000528768 A8MZ25 164 aa8.26□□□□□ -1.09
USF1-208ENST00000528768 NDUFA1O15239 70 aa8.26□□□□□ -1.09
USF1-208ENST00000528768 HERV-K104P63124 156 aa8.26□□□□□ -1.09
USF1-208ENST00000528768 OCIAD2Q56VL3 154 aa8.26□□□□□ -1.09
USF1-208ENST00000528768 LINC00242Q5T6M2 205 aa8.26□□□□□ -1.09
USF1-208ENST00000528768 MUSTN1Q8IVN3 82 aa8.26□□□□□ -1.09
USF1-208ENST00000528768 C10orf126Q8N4M7 172 aa8.26□□□□□ -1.09
USF1-208ENST00000528768 ATP6V0E2Q8NHE4 81 aa8.26□□□□□ -1.09
USF1-208ENST00000528768 CHCHD5Q9BSY4 110 aa8.26□□□□□ -1.09
USF1-208ENST00000528768 X6R8D5 127 aa8.26□□□□□ -1.09
USF1-208ENST00000528768 PRSS2P07478 247 aa8.25□□□□□ -1.09
USF1-208ENST00000528768 LINC00694P0DN24 101 aa8.25□□□□□ -1.09
USF1-208ENST00000528768 MIFP14174 115 aa8.25□□□□□ -1.09
USF1-208ENST00000528768 MIAQ16674 131 aa8.25□□□□□ -1.09
USF1-208ENST00000528768 RNF183Q96D59 192 aa8.25□□□□□ -1.09
USF1-208ENST00000528768 ERG28Q9UKR5 140 aa8.25□□□□□ -1.09
USF1-208ENST00000528768 LOC107984156A0A0G2JMH3 177 aa8.24□□□□□ -1.09
USF1-208ENST00000528768 IGLV5-39A0A0G2JS06 123 aa8.24□□□□□ -1.09
USF1-208ENST00000528768 LOC100131303A0A0U1RQF7 123 aa8.24□□□□□ -1.09
USF1-208ENST00000528768 TEX48A0A1B0GUV7 120 aa8.24□□□□□ -1.09
USF1-208ENST00000528768 A4D1N5 150 aa8.24□□□□□ -1.09
USF1-208ENST00000528768 J3QR89 54 aa8.24□□□□□ -1.09
USF1-208ENST00000528768 TSPAN13O95857 204 aa8.24□□□□□ -1.09
USF1-208ENST00000528768 CFC1BP0CG36 223 aa8.24□□□□□ -1.09
USF1-208ENST00000528768 CFC1P0CG37 223 aa8.24□□□□□ -1.09
USF1-208ENST00000528768 SCGB1C2P0DMR2 95 aa8.24□□□□□ -1.09
USF1-208ENST00000528768 GAGE6Q13070 117 aa8.24□□□□□ -1.09
USF1-208ENST00000528768 ARL17AQ8IVW1 177 aa8.24□□□□□ -1.09
USF1-208ENST00000528768 RYR1P21817 5038 aa8.23□□□□□ -1.09
USF1-208ENST00000528768 PAX4O43316 350 aa8.23□□□□□ -1.09
USF1-208ENST00000528768 GYPEP15421 78 aa8.23□□□□□ -1.09
USF1-208ENST00000528768 PSMB2P49721 201 aa8.23□□□□□ -1.09
USF1-208ENST00000528768 DAD1P61803 113 aa8.23□□□□□ -1.09
USF1-208ENST00000528768 FAM222AQ5U5X8 452 aa8.23□□□□□ -1.09
USF1-208ENST00000528768 SH2D6Q7Z4S9 175 aa8.23□□□□□ -1.09
USF1-208ENST00000528768 SPART-AS1P0CW21 52 aa8.22□□□□□ -1.09
USF1-208ENST00000528768 Q1RN00 199 aa8.22□□□□□ -1.09
USF1-208ENST00000528768 SFTA2Q6UW10 78 aa8.22□□□□□ -1.09
USF1-208ENST00000528768 ALMS1Q8TCU4 4167 aa8.21□□□□□ -1.09
USF1-208ENST00000528768 FRAS1Q86XX4 4008 aa8.21□□□□□ -1.1
USF1-208ENST00000528768 SMIM1B2RUZ4 78 aa8.21□□□□□ -1.1
USF1-208ENST00000528768 IGHV4-30-4P0DP06 118 aa8.21□□□□□ -1.1
USF1-208ENST00000528768 COX6A2Q02221 97 aa8.21□□□□□ -1.1
USF1-208ENST00000528768 DEFB135Q30KP9 77 aa8.21□□□□□ -1.1
USF1-208ENST00000528768 LINC00476Q8WZB0 136 aa8.21□□□□□ -1.1
USF1-208ENST00000528768 IGHV4-28A0A0C4DH34 117 aa8.2□□□□□ -1.1
USF1-208ENST00000528768 H3BMG7 143 aa8.2□□□□□ -1.1
USF1-208ENST00000528768 ATP5G1P05496 136 aa8.2□□□□□ -1.1
USF1-208ENST00000528768 COX6CP09669 75 aa8.2□□□□□ -1.1
USF1-208ENST00000528768 SS18Q15532 418 aa8.2□□□□□ -1.1
USF1-208ENST00000528768 RNF151Q2KHN1 245 aa8.2□□□□□ -1.1
USF1-208ENST00000528768 MEIG1Q5JSS6 88 aa8.2□□□□□ -1.1
USF1-208ENST00000528768 LITAFQ99732 161 aa8.2□□□□□ -1.1
USF1-208ENST00000528768 PPDPFQ9H3Y8 114 aa8.2□□□□□ -1.1
USF1-208ENST00000528768 Q9H8V8 135 aa8.2□□□□□ -1.1
USF1-208ENST00000528768 TRAV26-1A0A087WT03 109 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms