RNA–Protein interactions for RNA: ENST00000509982.5

CDK11A-223, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 2,306 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-223ENST00000509982 TMEM243Q9BU79 118 aa13.13□□□□□ -0.31
CDK11A-223ENST00000509982 MT-ATP8P03928 68 aa13.13□□□□□ -0.31
CDK11A-223ENST00000509982 RPL13AP40429 203 aaKnown RBP13.13□□□□□ -0.31
CDK11A-223ENST00000509982 UNC79Q9P2D8 2635 aa13.12□□□□□ -0.31
CDK11A-223ENST00000509982 UBE2L6O14933 153 aa13.12□□□□□ -0.31
CDK11A-223ENST00000509982 XGP55808 180 aa13.12□□□□□ -0.31
CDK11A-223ENST00000509982 LINC00308Q8TCZ7 52 aa13.12□□□□□ -0.31
CDK11A-223ENST00000509982 OVOL2Q9BRP0 275 aa13.12□□□□□ -0.31
CDK11A-223ENST00000509982 CIRBPQ14011 172 aaKnown RBP13.12□□□□□ -0.31
CDK11A-223ENST00000509982 HELZ2Q9BYK8 2649 aaKnown RBP13.12□□□□□ -0.31
CDK11A-223ENST00000509982 TRBV6-4A0A1B0GX49 114 aa13.11□□□□□ -0.31
CDK11A-223ENST00000509982 HILS1P60008 231 aa13.11□□□□□ -0.31
CDK11A-223ENST00000509982 CLEC2BQ92478 149 aa13.11□□□□□ -0.31
CDK11A-223ENST00000509982 TRGV4A0A0C4DH28 118 aa13.11□□□□□ -0.31
CDK11A-223ENST00000509982 SOSTDC1Q6X4U4 206 aa13.11□□□□□ -0.31
CDK11A-223ENST00000509982 NTN5Q8WTR8 489 aaPredicted RBP13.11□□□□□ -0.31
CDK11A-223ENST00000509982 TRBV10-2A0A0K0K1G8 114 aa13.1□□□□□ -0.31
CDK11A-223ENST00000509982 CKS1BP61024 79 aa13.1□□□□□ -0.31
CDK11A-223ENST00000509982 PRIMA1Q86XR5 153 aa13.1□□□□□ -0.31
CDK11A-223ENST00000509982 SMR3AQ99954 134 aa13.09□□□□□ -0.31
CDK11A-223ENST00000509982 FHL2Q14192 279 aa13.08□□□□□ -0.31
CDK11A-223ENST00000509982 COX6CP09669 75 aa13.08□□□□□ -0.32
CDK11A-223ENST00000509982 KRTAP10-3P60369 221 aa13.08□□□□□ -0.32
CDK11A-223ENST00000509982 GAGE6Q13070 117 aa13.08□□□□□ -0.32
CDK11A-223ENST00000509982 H7C423 109 aa13.07□□□□□ -0.32
CDK11A-223ENST00000509982 LINC01600Q96MT4 127 aa13.07□□□□□ -0.32
CDK11A-223ENST00000509982 MEIG1Q5JSS6 88 aa13.07□□□□□ -0.32
CDK11A-223ENST00000509982 TEX49A0A1B0GTD5 131 aa13.06□□□□□ -0.32
CDK11A-223ENST00000509982 IGLV4-60A0A075B6I1 120 aa13.06□□□□□ -0.32
CDK11A-223ENST00000509982 FASNP49327 2511 aaKnown RBP13.06□□□□□ -0.32
CDK11A-223ENST00000509982 IGKV3OR2-268A0A0C4DH90 116 aa13.05□□□□□ -0.32
CDK11A-223ENST00000509982 LST1O00453 97 aa13.05□□□□□ -0.32
CDK11A-223ENST00000509982 FN1P02751 2386 aaKnown RBP13.04□□□□□ -0.32
CDK11A-223ENST00000509982 C2orf82Q6UX34 121 aa13.04□□□□□ -0.32
CDK11A-223ENST00000509982 HIVEP2P31629 2446 aa13.04□□□□□ -0.32
CDK11A-223ENST00000509982 TRBV6-8A0A0A6YYG3 113 aa13.04□□□□□ -0.32
CDK11A-223ENST00000509982 J3QKU1 62 aa13.02□□□□□ -0.32
CDK11A-223ENST00000509982 DEFB130BP0DP73 79 aa13.02□□□□□ -0.32
CDK11A-223ENST00000509982 DEFB130AP0DP74 79 aa13.02□□□□□ -0.32
CDK11A-223ENST00000509982 GCN1Q92616 2671 aaKnown RBP13.02□□□□□ -0.32
CDK11A-223ENST00000509982 HERV-K104P63124 156 aa13.02□□□□□ -0.33
CDK11A-223ENST00000509982 VWFP04275 2813 aa13.01□□□□□ -0.33
CDK11A-223ENST00000509982 CHCHD5Q9BSY4 110 aa13.01□□□□□ -0.33
CDK11A-223ENST00000509982 TMEM262E9PQX1 116 aa13.01□□□□□ -0.33
CDK11A-223ENST00000509982 CRLF1O75462 422 aa13.01□□□□□ -0.33
CDK11A-223ENST00000509982 UBE2WQ96B02 151 aa13.01□□□□□ -0.33
CDK11A-223ENST00000509982 PF4P02776 101 aa13□□□□□ -0.33
CDK11A-223ENST00000509982 NBEAL2Q6ZNJ1 2754 aa13□□□□□ -0.33
CDK11A-223ENST00000509982 H3BT86 120 aa13□□□□□ -0.33
CDK11A-223ENST00000509982 LINC00482Q8N8I6 264 aa13□□□□□ -0.33
CDK11A-223ENST00000509982 COX7B2Q8TF08 81 aa13□□□□□ -0.33
CDK11A-223ENST00000509982 TOMM7Q9P0U1 55 aa12.99□□□□□ -0.33
CDK11A-223ENST00000509982 COPS9Q8WXC6 57 aa12.99□□□□□ -0.33
CDK11A-223ENST00000509982 SHISA2Q6UWI4 295 aa12.98□□□□□ -0.33
CDK11A-223ENST00000509982 SPATA3Q8NHX4 192 aa12.98□□□□□ -0.33
CDK11A-223ENST00000509982 IGHV3OR16-9A0A0B4J2B5 98 aa12.97□□□□□ -0.33
CDK11A-223ENST00000509982 KMT2BQ9UMN6 2715 aaPredicted RBP12.97□□□□□ -0.33
CDK11A-223ENST00000509982 KIR2DL5BQ8NHK3 375 aa12.97□□□□□ -0.33
CDK11A-223ENST00000509982 LINC00612Q8N6U2 182 aa12.96□□□□□ -0.33
CDK11A-223ENST00000509982 TRAV26-1A0A087WT03 109 aa12.96□□□□□ -0.34
CDK11A-223ENST00000509982 COX7A2LO14548 114 aa12.96□□□□□ -0.34
CDK11A-223ENST00000509982 X6R8D5 127 aa12.95□□□□□ -0.34
CDK11A-223ENST00000509982 GYPEP15421 78 aa12.95□□□□□ -0.34
CDK11A-223ENST00000509982 MIR7-3HGQ8N6C7 128 aa12.95□□□□□ -0.34
CDK11A-223ENST00000509982 CITED1Q99966 193 aa12.95□□□□□ -0.34
CDK11A-223ENST00000509982 TRAV8-4A0A0B4J246 113 aa12.94□□□□□ -0.34
CDK11A-223ENST00000509982 C5orf38Q86SI9 138 aa12.94□□□□□ -0.34
CDK11A-223ENST00000509982 PPDPFQ9H3Y8 114 aa12.93□□□□□ -0.34
CDK11A-223ENST00000509982 HECTD1Q9ULT8 2610 aa12.92□□□□□ -0.34
CDK11A-223ENST00000509982 A0A087WZ39 114 aa12.92□□□□□ -0.34
CDK11A-223ENST00000509982 LINC00959A0A1B0GUT2 108 aa12.92□□□□□ -0.34
CDK11A-223ENST00000509982 LY6G6DO95868 133 aa12.92□□□□□ -0.34
CDK11A-223ENST00000509982 A0A096LPF7 62 aa12.91□□□□□ -0.34
CDK11A-223ENST00000509982 IGKV2-28A0A075B6P5 120 aa12.9□□□□□ -0.34
CDK11A-223ENST00000509982 IGKV2D-28P01615 120 aa12.9□□□□□ -0.34
CDK11A-223ENST00000509982 LINC00337Q8N6G1 96 aa12.9□□□□□ -0.34
CDK11A-223ENST00000509982 LINC00158P58513 81 aa12.9□□□□□ -0.34
CDK11A-223ENST00000509982 FAM218AQ96MZ4 157 aa12.9□□□□□ -0.34
CDK11A-223ENST00000509982 NOTCH2Q04721 2471 aa12.9□□□□□ -0.34
CDK11A-223ENST00000509982 SND1-IT1Q9HBX3 110 aa12.89□□□□□ -0.35
CDK11A-223ENST00000509982 OTOGQ6ZRI0 2925 aa12.89□□□□□ -0.35
CDK11A-223ENST00000509982 TENM1Q9UKZ4 2725 aa12.88□□□□□ -0.35
CDK11A-223ENST00000509982 DEFB121Q5J5C9 76 aa12.88□□□□□ -0.35
CDK11A-223ENST00000509982 FAM222AQ5U5X8 452 aa12.88□□□□□ -0.35
CDK11A-223ENST00000509982 CLPSL2Q6UWE3 100 aa12.88□□□□□ -0.35
CDK11A-223ENST00000509982 DEFB4AO15263 64 aa12.87□□□□□ -0.35
CDK11A-223ENST00000509982 CRPP02741 224 aa12.87□□□□□ -0.35
CDK11A-223ENST00000509982 XCL1P47992 114 aa12.87□□□□□ -0.35
CDK11A-223ENST00000509982 C11orf68Q9H3H3 251 aaKnown RBP12.87□□□□□ -0.35
CDK11A-223ENST00000509982 PRO0255Q9UI72 69 aa12.87□□□□□ -0.35
CDK11A-223ENST00000509982 TRAV13-2A0A0B4J235 113 aa12.87□□□□□ -0.35
CDK11A-223ENST00000509982 PFN2P35080 140 aa12.87□□□□□ -0.35
CDK11A-223ENST00000509982 CCL18P55774 89 aa12.87□□□□□ -0.35
CDK11A-223ENST00000509982 ANAPC13Q9BS18 74 aa12.86□□□□□ -0.35
CDK11A-223ENST00000509982 SMIM9A6NGZ8 99 aa12.85□□□□□ -0.35
CDK11A-223ENST00000509982 IBA57-AS1B1ANH7 110 aa12.85□□□□□ -0.35
CDK11A-223ENST00000509982 SNCGO76070 127 aa12.85□□□□□ -0.35
CDK11A-223ENST00000509982 TRACP01848 142 aa12.85□□□□□ -0.35
CDK11A-223ENST00000509982 DEFB135Q30KP9 77 aa12.85□□□□□ -0.35
CDK11A-223ENST00000509982 A0A1B0GUV1 79 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 154.2 ms