RNA–Protein interactions for RNA: ENST00000509903.5

CAST-228, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-228ENST00000509903 LITAFQ99732 161 aa5.34□□□□□ -1.55
CAST-228ENST00000509903 PDZD2O15018 2839 aa5.34□□□□□ -1.56
CAST-228ENST00000509903 IGLV5-45A0A087WSX0 123 aa5.33□□□□□ -1.56
CAST-228ENST00000509903 GAGE7O76087 117 aa5.33□□□□□ -1.56
CAST-228ENST00000509903 GIG44P09565 113 aaPredicted RBP5.33□□□□□ -1.56
CAST-228ENST00000509903 GAGE12FP0CL80 117 aa5.33□□□□□ -1.56
CAST-228ENST00000509903 GAGE12GP0CL81 117 aa5.33□□□□□ -1.56
CAST-228ENST00000509903 GAGE12IP0CL82 117 aa5.33□□□□□ -1.56
CAST-228ENST00000509903 LINC00694P0DN24 101 aa5.33□□□□□ -1.56
CAST-228ENST00000509903 MIAQ16674 131 aa5.33□□□□□ -1.56
CAST-228ENST00000509903 SPANXDQ9BXN6 97 aa5.33□□□□□ -1.56
CAST-228ENST00000509903 SPANXCQ9NY87 97 aa5.33□□□□□ -1.56
CAST-228ENST00000509903 CUBNO60494 3623 aa5.33□□□□□ -1.56
CAST-228ENST00000509903 TRAV13-1A0A0B4J241 112 aa5.33□□□□□ -1.56
CAST-228ENST00000509903 UBE2L6O14933 153 aa5.33□□□□□ -1.56
CAST-228ENST00000509903 ATP6V0E2Q8NHE4 81 aa5.33□□□□□ -1.56
CAST-228ENST00000509903 TRGV4A0A0C4DH28 118 aa5.32□□□□□ -1.56
CAST-228ENST00000509903 NDUFA7O95182 113 aa5.32□□□□□ -1.56
CAST-228ENST00000509903 NPC2P61916 151 aa5.32□□□□□ -1.56
CAST-228ENST00000509903 ADAMTSL4-AS1Q5T5F5 129 aa5.32□□□□□ -1.56
CAST-228ENST00000509903 LINC00242Q5T6M2 205 aa5.32□□□□□ -1.56
CAST-228ENST00000509903 CD164L2Q6UWJ8 174 aa5.32□□□□□ -1.56
CAST-228ENST00000509903 NTM-AS1Q6ZSK4 140 aa5.32□□□□□ -1.56
CAST-228ENST00000509903 LINC00476Q8WZB0 136 aa5.32□□□□□ -1.56
CAST-228ENST00000509903 TMEM101Q96IK0 257 aa5.32□□□□□ -1.56
CAST-228ENST00000509903 TMEM243Q9BU79 118 aa5.32□□□□□ -1.56
CAST-228ENST00000509903 CSDC2Q9Y534 153 aaKnown RBP5.32□□□□□ -1.56
CAST-228ENST00000509903 ANK3Q12955 4377 aaKnown RBP5.32□□□□□ -1.56
CAST-228ENST00000509903 NIPBLQ6KC79 2804 aaeCLIP5.32□□□□□ -1.561e-7■□□□□ 11.1
CAST-228ENST00000509903 HECTD1Q9ULT8 2610 aa5.32□□□□□ -1.56
CAST-228ENST00000509903 PLAC8L1A1L4L8 177 aa5.32□□□□□ -1.56
CAST-228ENST00000509903 NDUFA1O15239 70 aa5.32□□□□□ -1.56
CAST-228ENST00000509903 TIMM17BO60830 172 aa5.32□□□□□ -1.56
CAST-228ENST00000509903 INSL3P51460 131 aa5.32□□□□□ -1.56
CAST-228ENST00000509903 COX6A2Q02221 97 aa5.32□□□□□ -1.56
CAST-228ENST00000509903 CIRBPQ14011 172 aaKnown RBP5.32□□□□□ -1.56
CAST-228ENST00000509903 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.32□□□□□ -1.56
CAST-228ENST00000509903 FLNBO75369 2602 aaKnown RBP5.32□□□□□ -1.56
CAST-228ENST00000509903 NOTCH2Q04721 2471 aa5.31□□□□□ -1.56
CAST-228ENST00000509903 CIDEAO60543 219 aa5.31□□□□□ -1.56
CAST-228ENST00000509903 TEN1Q86WV5 123 aa5.31□□□□□ -1.56
CAST-228ENST00000509903 TRBV6-4A0A1B0GX49 114 aa5.31□□□□□ -1.56
CAST-228ENST00000509903 IFITM1P13164 125 aa5.31□□□□□ -1.56
CAST-228ENST00000509903 ATXN8Q156A1 80 aa5.31□□□□□ -1.56
CAST-228ENST00000509903 SBSPONQ8IVN8 264 aa5.31□□□□□ -1.56
CAST-228ENST00000509903 CSNK1G2-AS1Q8NCQ2 148 aa5.31□□□□□ -1.56
CAST-228ENST00000509903 SIGMAR1Q99720 223 aa5.31□□□□□ -1.56
CAST-228ENST00000509903 OVOL2Q9BRP0 275 aa5.31□□□□□ -1.56
CAST-228ENST00000509903 GTSF1LQ9H1H1 148 aa5.31□□□□□ -1.56
CAST-228ENST00000509903 CDC42SE2Q9NRR3 84 aa5.31□□□□□ -1.56
CAST-228ENST00000509903 IGLV5-39A0A0G2JS06 123 aa5.3□□□□□ -1.56
CAST-228ENST00000509903 TRBV30A0A0K0K1B3 111 aa5.3□□□□□ -1.56
CAST-228ENST00000509903 LOC100131303A0A0U1RQF7 123 aa5.3□□□□□ -1.56
CAST-228ENST00000509903 SMIM1B2RUZ4 78 aa5.3□□□□□ -1.56
CAST-228ENST00000509903 C9JAW5 83 aa5.3□□□□□ -1.56
CAST-228ENST00000509903 SLC25A20O43772 301 aa5.3□□□□□ -1.56
CAST-228ENST00000509903 SEC61GP60059 68 aa5.3□□□□□ -1.56
CAST-228ENST00000509903 FAM19A3Q7Z5A8 133 aa5.3□□□□□ -1.56
CAST-228ENST00000509903 DAND5Q8N907 189 aa5.3□□□□□ -1.56
CAST-228ENST00000509903 PPDPFLQ8WWR9 84 aa5.3□□□□□ -1.56
CAST-228ENST00000509903 SMR3AQ99954 134 aa5.3□□□□□ -1.56
CAST-228ENST00000509903 FN1P02751 2386 aaKnown RBP5.3□□□□□ -1.56
CAST-228ENST00000509903 COX6CP09669 75 aa5.29□□□□□ -1.56
CAST-228ENST00000509903 ZNF625Q96I27 306 aaPredicted RBP5.29□□□□□ -1.56
CAST-228ENST00000509903 ICOSQ9Y6W8 199 aa5.29□□□□□ -1.56
CAST-228ENST00000509903 CYSRT1A8MQ03 144 aa5.29□□□□□ -1.56
CAST-228ENST00000509903 SEC61BP60468 96 aaKnown RBP5.29□□□□□ -1.56
CAST-228ENST00000509903 LINC01620Q4KN68 170 aa5.29□□□□□ -1.56
CAST-228ENST00000509903 MEIG1Q5JSS6 88 aa5.29□□□□□ -1.56
CAST-228ENST00000509903 PRIMA1Q86XR5 153 aa5.29□□□□□ -1.56
CAST-228ENST00000509903 ANKRD29Q8N6D5 301 aa5.29□□□□□ -1.56
CAST-228ENST00000509903 COPS9Q8WXC6 57 aa5.29□□□□□ -1.56
CAST-228ENST00000509903 H7C423 109 aa5.28□□□□□ -1.56
CAST-228ENST00000509903 GAGE6Q13070 117 aa5.28□□□□□ -1.56
CAST-228ENST00000509903 DEFB130BP0DP73 79 aa5.28□□□□□ -1.56
CAST-228ENST00000509903 DEFB130AP0DP74 79 aa5.28□□□□□ -1.56
CAST-228ENST00000509903 RPL13AP40429 203 aaKnown RBP5.28□□□□□ -1.56
CAST-228ENST00000509903 FHL2Q14192 279 aa5.28□□□□□ -1.56
CAST-228ENST00000509903 LINC00308Q8TCZ7 52 aa5.28□□□□□ -1.56
CAST-228ENST00000509903 CHCHD5Q9BSY4 110 aa5.28□□□□□ -1.56
CAST-228ENST00000509903 TRBV6-8A0A0A6YYG3 113 aa5.27□□□□□ -1.57
CAST-228ENST00000509903 IGKV3OR2-268A0A0C4DH90 116 aa5.27□□□□□ -1.57
CAST-228ENST00000509903 F5H768 121 aa5.27□□□□□ -1.57
CAST-228ENST00000509903 CRLF1O75462 422 aa5.27□□□□□ -1.57
CAST-228ENST00000509903 M0QXV9 152 aa5.26□□□□□ -1.57
CAST-228ENST00000509903 KRTAP10-3P60369 221 aa5.26□□□□□ -1.57
CAST-228ENST00000509903 CARD19Q96LW7 228 aa5.26□□□□□ -1.57
CAST-228ENST00000509903 LY6G6DO95868 133 aa5.26□□□□□ -1.57
CAST-228ENST00000509903 SCGB1A1P11684 91 aa5.26□□□□□ -1.57
CAST-228ENST00000509903 TRBV10-2A0A0K0K1G8 114 aa5.25□□□□□ -1.57
CAST-228ENST00000509903 KIR2DL5BQ8NHK3 375 aa5.25□□□□□ -1.57
CAST-228ENST00000509903 TOMM7Q9P0U1 55 aa5.25□□□□□ -1.57
CAST-228ENST00000509903 IGLV4-60A0A075B6I1 120 aa5.25□□□□□ -1.57
CAST-228ENST00000509903 TRAV26-1A0A087WT03 109 aa5.25□□□□□ -1.57
CAST-228ENST00000509903 CLEC2BQ92478 149 aa5.25□□□□□ -1.57
CAST-228ENST00000509903 C2orf82Q6UX34 121 aa5.24□□□□□ -1.57
CAST-228ENST00000509903 COX7B2Q8TF08 81 aa5.24□□□□□ -1.57
CAST-228ENST00000509903 NTN5Q8WTR8 489 aaPredicted RBP5.24□□□□□ -1.57
CAST-228ENST00000509903 SMIM9A6NGZ8 99 aa5.23□□□□□ -1.57
CAST-228ENST00000509903 TMEM262E9PQX1 116 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms