RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 TRAV13-2A0A0B4J235 113 aa5.34□□□□□ -1.55
PDGFC-203ENST00000502773 FREM2Q5SZK8 3169 aa5.34□□□□□ -1.55
PDGFC-203ENST00000502773 IGLV5-45A0A087WSX0 123 aa5.34□□□□□ -1.55
PDGFC-203ENST00000502773 CSPG4Q6UVK1 2322 aa5.34□□□□□ -1.56
PDGFC-203ENST00000502773 SPG11Q96JI7 2443 aa5.34□□□□□ -1.56
PDGFC-203ENST00000502773 CXCL5P42830 114 aa5.34□□□□□ -1.56
PDGFC-203ENST00000502773 PRIMA1Q86XR5 153 aa5.34□□□□□ -1.56
PDGFC-203ENST00000502773 SNURFQ9Y675 71 aa5.34□□□□□ -1.56
PDGFC-203ENST00000502773 FAM208BQ5VWN6 2430 aa5.33□□□□□ -1.56
PDGFC-203ENST00000502773 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.33□□□□□ -1.56
PDGFC-203ENST00000502773 IGKV2-29A2NJV5 120 aaPredicted RBP5.33□□□□□ -1.56
PDGFC-203ENST00000502773 MIFP14174 115 aa5.33□□□□□ -1.56
PDGFC-203ENST00000502773 ESM1Q9NQ30 184 aa5.33□□□□□ -1.56
PDGFC-203ENST00000502773 TRBV30A0A0K0K1B3 111 aa5.33□□□□□ -1.56
PDGFC-203ENST00000502773 COL6A3P12111 3177 aa5.33□□□□□ -1.56
PDGFC-203ENST00000502773 C2orf48Q96LS8 159 aa5.33□□□□□ -1.56
PDGFC-203ENST00000502773 WNK1Q9H4A3 2382 aa5.32□□□□□ -1.56
PDGFC-203ENST00000502773 A0A087WVE0 104 aa5.32□□□□□ -1.56
PDGFC-203ENST00000502773 Q6ZTI0 123 aa5.32□□□□□ -1.56
PDGFC-203ENST00000502773 LINC00482Q8N8I6 264 aa5.32□□□□□ -1.56
PDGFC-203ENST00000502773 MGAQ8IWI9 3026 aa5.32□□□□□ -1.56
PDGFC-203ENST00000502773 NAV2Q8IVL1 2488 aa5.32□□□□□ -1.56
PDGFC-203ENST00000502773 LY6G6DO95868 133 aa5.32□□□□□ -1.56
PDGFC-203ENST00000502773 TOMM7Q9P0U1 55 aa5.32□□□□□ -1.56
PDGFC-203ENST00000502773 SPART-AS1P0CW21 52 aa5.32□□□□□ -1.56
PDGFC-203ENST00000502773 C6orf226Q5I0X4 101 aa5.32□□□□□ -1.56
PDGFC-203ENST00000502773 SERP1Q9Y6X1 66 aa5.32□□□□□ -1.56
PDGFC-203ENST00000502773 TRBV6-8A0A0A6YYG3 113 aa5.31□□□□□ -1.56
PDGFC-203ENST00000502773 PAX4O43316 350 aa5.31□□□□□ -1.56
PDGFC-203ENST00000502773 CDC42SE2Q9NRR3 84 aa5.31□□□□□ -1.56
PDGFC-203ENST00000502773 ABCA2Q9BZC7 2435 aa5.31□□□□□ -1.56
PDGFC-203ENST00000502773 IGHV3-38A0A0C4DH36 116 aa5.31□□□□□ -1.56
PDGFC-203ENST00000502773 CRPP02741 224 aa5.31□□□□□ -1.56
PDGFC-203ENST00000502773 DSPP15924 2871 aaKnown RBP5.31□□□□□ -1.56
PDGFC-203ENST00000502773 FAM222AQ5U5X8 452 aa5.31□□□□□ -1.56
PDGFC-203ENST00000502773 TRIAP1O43715 76 aa5.3□□□□□ -1.56
PDGFC-203ENST00000502773 IGHV3-33P01772 117 aa5.3□□□□□ -1.56
PDGFC-203ENST00000502773 LAMTOR3Q9UHA4 124 aa5.3□□□□□ -1.56
PDGFC-203ENST00000502773 CHD8Q9HCK8 2581 aa5.3□□□□□ -1.56
PDGFC-203ENST00000502773 IGKV3OR2-268A0A0C4DH90 116 aa5.3□□□□□ -1.56
PDGFC-203ENST00000502773 A0A1B0GUV1 79 aa5.3□□□□□ -1.56
PDGFC-203ENST00000502773 ZNF462Q96JM2 2506 aa5.3□□□□□ -1.56
PDGFC-203ENST00000502773 H3BQ85 93 aa5.3□□□□□ -1.56
PDGFC-203ENST00000502773 COX7B2Q8TF08 81 aa5.3□□□□□ -1.56
PDGFC-203ENST00000502773 Q9H8V8 135 aa5.3□□□□□ -1.56
PDGFC-203ENST00000502773 C14orf132Q9NPU4 83 aa5.3□□□□□ -1.56
PDGFC-203ENST00000502773 CRYGAP11844 174 aa5.3□□□□□ -1.56
PDGFC-203ENST00000502773 OPRPNQ99935 248 aaPredicted RBP5.3□□□□□ -1.56
PDGFC-203ENST00000502773 IGLV5-39A0A0G2JS06 123 aa5.29□□□□□ -1.56
PDGFC-203ENST00000502773 LRCOL1A6NCL2 159 aa5.29□□□□□ -1.56
PDGFC-203ENST00000502773 IBA57-AS1B1ANH7 110 aa5.29□□□□□ -1.56
PDGFC-203ENST00000502773 H0YGX0 51 aa5.29□□□□□ -1.56
PDGFC-203ENST00000502773 DEFB130BP0DP73 79 aa5.29□□□□□ -1.56
PDGFC-203ENST00000502773 DEFB130AP0DP74 79 aa5.29□□□□□ -1.56
PDGFC-203ENST00000502773 CR1P17927 2039 aa5.29□□□□□ -1.56
PDGFC-203ENST00000502773 KRTAP1-1Q07627 177 aa5.29□□□□□ -1.56
PDGFC-203ENST00000502773 C4orf48Q5BLP8 95 aa5.29□□□□□ -1.56
PDGFC-203ENST00000502773 CDKN2A-AS1Q9UH64 79 aa5.29□□□□□ -1.56
PDGFC-203ENST00000502773 DAND5Q8N907 189 aa5.29□□□□□ -1.56
PDGFC-203ENST00000502773 Q9HAA7 133 aa5.29□□□□□ -1.56
PDGFC-203ENST00000502773 F8WEM9 126 aa5.28□□□□□ -1.56
PDGFC-203ENST00000502773 GYPEP15421 78 aa5.28□□□□□ -1.56
PDGFC-203ENST00000502773 LINC00242Q5T6M2 205 aa5.28□□□□□ -1.56
PDGFC-203ENST00000502773 LINC00158P58513 81 aa5.28□□□□□ -1.56
PDGFC-203ENST00000502773 FHL2Q14192 279 aa5.28□□□□□ -1.56
PDGFC-203ENST00000502773 TRBV7-7A0A0K0K1E9 115 aa5.27□□□□□ -1.57
PDGFC-203ENST00000502773 SBSPONQ8IVN8 264 aa5.27□□□□□ -1.57
PDGFC-203ENST00000502773 LINC00612Q8N6U2 182 aa5.27□□□□□ -1.57
PDGFC-203ENST00000502773 WDFY4Q6ZS81 3184 aa5.27□□□□□ -1.57
PDGFC-203ENST00000502773 ANKRD17O75179 2603 aaKnown RBP5.27□□□□□ -1.57
PDGFC-203ENST00000502773 Q6ZSN1 163 aa5.27□□□□□ -1.57
PDGFC-203ENST00000502773 MUC4Q99102 2169 aa5.27□□□□□ -1.57
PDGFC-203ENST00000502773 COX17Q14061 63 aa5.26□□□□□ -1.57
PDGFC-203ENST00000502773 CSNK1G2-AS1Q8NCQ2 148 aa5.26□□□□□ -1.57
PDGFC-203ENST00000502773 RNASE13Q5GAN3 156 aaKnown RBP5.26□□□□□ -1.57
PDGFC-203ENST00000502773 ENHOQ6UWT2 76 aa5.26□□□□□ -1.57
PDGFC-203ENST00000502773 WFDC9Q8NEX5 89 aa5.26□□□□□ -1.57
PDGFC-203ENST00000502773 C19orf73Q9NVV2 129 aa5.26□□□□□ -1.57
PDGFC-203ENST00000502773 OXLD1Q5BKU9 147 aa5.26□□□□□ -1.57
PDGFC-203ENST00000502773 LINC00308Q8TCZ7 52 aa5.26□□□□□ -1.57
PDGFC-203ENST00000502773 TSPEAR-AS2P59090 65 aa5.26□□□□□ -1.57
PDGFC-203ENST00000502773 A0A087WZ39 114 aa5.25□□□□□ -1.57
PDGFC-203ENST00000502773 SMIM1B2RUZ4 78 aa5.25□□□□□ -1.57
PDGFC-203ENST00000502773 COX7A2LO14548 114 aa5.25□□□□□ -1.57
PDGFC-203ENST00000502773 UPK3BQ9BT76 320 aa5.25□□□□□ -1.57
PDGFC-203ENST00000502773 HIST2H2BCQ6DN03 193 aa5.25□□□□□ -1.57
PDGFC-203ENST00000502773 HIST2H2BDQ6DRA6 164 aa5.25□□□□□ -1.57
PDGFC-203ENST00000502773 Q8IZM0 81 aa5.25□□□□□ -1.57
PDGFC-203ENST00000502773 MYO18BQ8IUG5 2567 aa5.24□□□□□ -1.57
PDGFC-203ENST00000502773 H3BNG1 76 aa5.24□□□□□ -1.57
PDGFC-203ENST00000502773 PSPHP1O15172 72 aa5.24□□□□□ -1.57
PDGFC-203ENST00000502773 XCL1P47992 114 aa5.24□□□□□ -1.57
PDGFC-203ENST00000502773 INAFM1C9JVW0 142 aa5.24□□□□□ -1.57
PDGFC-203ENST00000502773 LELP1Q5T871 98 aa5.24□□□□□ -1.57
PDGFC-203ENST00000502773 CD164L2Q6UWJ8 174 aa5.24□□□□□ -1.57
PDGFC-203ENST00000502773 LINC01600Q96MT4 127 aa5.24□□□□□ -1.57
PDGFC-203ENST00000502773 TRBV7-6A0A0J9YX20 115 aa5.23□□□□□ -1.57
PDGFC-203ENST00000502773 FUSP35637 526 aaKnown RBP eCLIP5.23□□□□□ -1.57
PDGFC-203ENST00000502773 HIVEP2P31629 2446 aa5.23□□□□□ -1.57
PDGFC-203ENST00000502773 LINC00959A0A1B0GUT2 108 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms