RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 MEIG1Q5JSS6 88 aa6.82□□□□□ -1.32
NPHP3-209ENST00000493732 ANKRD29Q8N6D5 301 aa6.82□□□□□ -1.32
NPHP3-209ENST00000493732 LINC00308Q8TCZ7 52 aa6.82□□□□□ -1.32
NPHP3-209ENST00000493732 ZNF625Q96I27 306 aaPredicted RBP6.82□□□□□ -1.32
NPHP3-209ENST00000493732 TRBV10-2A0A0K0K1G8 114 aa6.82□□□□□ -1.32
NPHP3-209ENST00000493732 TRIAP1O43715 76 aa6.82□□□□□ -1.32
NPHP3-209ENST00000493732 PDZD2O15018 2839 aa6.81□□□□□ -1.32
NPHP3-209ENST00000493732 LY6G6DO95868 133 aa6.81□□□□□ -1.32
NPHP3-209ENST00000493732 CHCHD5Q9BSY4 110 aa6.81□□□□□ -1.32
NPHP3-209ENST00000493732 LYRM9A8MSI8 78 aa6.8□□□□□ -1.32
NPHP3-209ENST00000493732 H3BT86 120 aa6.8□□□□□ -1.32
NPHP3-209ENST00000493732 CRLF1O75462 422 aa6.8□□□□□ -1.32
NPHP3-209ENST00000493732 RPL13AP40429 203 aaKnown RBP6.8□□□□□ -1.32
NPHP3-209ENST00000493732 GAGE6Q13070 117 aa6.8□□□□□ -1.32
NPHP3-209ENST00000493732 COX7B2Q8TF08 81 aa6.8□□□□□ -1.32
NPHP3-209ENST00000493732 PRO0255Q9UI72 69 aa6.8□□□□□ -1.32
NPHP3-209ENST00000493732 HIVEP2P31629 2446 aa6.79□□□□□ -1.32
NPHP3-209ENST00000493732 LOC100131303A0A0U1RQF7 123 aa6.79□□□□□ -1.32
NPHP3-209ENST00000493732 A0A1B0GUV1 79 aa6.79□□□□□ -1.32
NPHP3-209ENST00000493732 DEFB130BP0DP73 79 aa6.79□□□□□ -1.32
NPHP3-209ENST00000493732 DEFB130AP0DP74 79 aa6.79□□□□□ -1.32
NPHP3-209ENST00000493732 APOC4P55056 127 aa6.79□□□□□ -1.32
NPHP3-209ENST00000493732 KRTAP10-3P60369 221 aa6.79□□□□□ -1.32
NPHP3-209ENST00000493732 NPC2P61916 151 aa6.79□□□□□ -1.32
NPHP3-209ENST00000493732 LST1O00453 97 aa6.78□□□□□ -1.32
NPHP3-209ENST00000493732 CARD19Q96LW7 228 aa6.78□□□□□ -1.32
NPHP3-209ENST00000493732 TENM4Q6N022 2769 aa6.78□□□□□ -1.32
NPHP3-209ENST00000493732 A0A087WZ39 114 aa6.78□□□□□ -1.32
NPHP3-209ENST00000493732 FAM222AQ5U5X8 452 aa6.78□□□□□ -1.32
NPHP3-209ENST00000493732 LINC01561Q8N1V8 128 aa6.78□□□□□ -1.32
NPHP3-209ENST00000493732 DAND5Q8N907 189 aa6.78□□□□□ -1.32
NPHP3-209ENST00000493732 SMR3AQ99954 134 aa6.78□□□□□ -1.32
NPHP3-209ENST00000493732 TRAV13-2A0A0B4J235 113 aa6.77□□□□□ -1.33
NPHP3-209ENST00000493732 IGHV3OR16-9A0A0B4J2B5 98 aa6.77□□□□□ -1.33
NPHP3-209ENST00000493732 SS18Q15532 418 aa6.77□□□□□ -1.33
NPHP3-209ENST00000493732 C2orf82Q6UX34 121 aa6.77□□□□□ -1.33
NPHP3-209ENST00000493732 X6R8D5 127 aa6.77□□□□□ -1.33
NPHP3-209ENST00000493732 ACANP16112 2415 aa6.77□□□□□ -1.33
NPHP3-209ENST00000493732 TRAV26-1A0A087WT03 109 aa6.76□□□□□ -1.33
NPHP3-209ENST00000493732 IBA57-AS1B1ANH7 110 aa6.76□□□□□ -1.33
NPHP3-209ENST00000493732 GYPEP15421 78 aa6.76□□□□□ -1.33
NPHP3-209ENST00000493732 ZNF469Q96JG9 3925 aaPredicted RBP6.76□□□□□ -1.33
NPHP3-209ENST00000493732 IGLV4-60A0A075B6I1 120 aa6.76□□□□□ -1.33
NPHP3-209ENST00000493732 COX7A2LO14548 114 aa6.76□□□□□ -1.33
NPHP3-209ENST00000493732 SHISA2Q6UWI4 295 aa6.76□□□□□ -1.33
NPHP3-209ENST00000493732 UBE2WQ96B02 151 aa6.76□□□□□ -1.33
NPHP3-209ENST00000493732 UNC79Q9P2D8 2635 aa6.76□□□□□ -1.33
NPHP3-209ENST00000493732 NF1P21359 2839 aa6.75□□□□□ -1.33
NPHP3-209ENST00000493732 LINC00959A0A1B0GUT2 108 aa6.75□□□□□ -1.33
NPHP3-209ENST00000493732 PAX4O43316 350 aa6.75□□□□□ -1.33
NPHP3-209ENST00000493732 NTN5Q8WTR8 489 aaPredicted RBP6.75□□□□□ -1.33
NPHP3-209ENST00000493732 CDIP1Q9H305 208 aa6.75□□□□□ -1.33
NPHP3-209ENST00000493732 MTORP42345 2549 aa6.75□□□□□ -1.33
NPHP3-209ENST00000493732 ANK3Q12955 4377 aaKnown RBP6.75□□□□□ -1.33
NPHP3-209ENST00000493732 AKAP9Q99996 3911 aa6.75□□□□□ -1.33
NPHP3-209ENST00000493732 KMT2BQ9UMN6 2715 aaPredicted RBP6.74□□□□□ -1.33
NPHP3-209ENST00000493732 TOMM7Q9P0U1 55 aa6.74□□□□□ -1.33
NPHP3-209ENST00000493732 IGKV3OR2-268A0A0C4DH90 116 aa6.74□□□□□ -1.33
NPHP3-209ENST00000493732 A0A0U1RRA0 63 aa6.74□□□□□ -1.33
NPHP3-209ENST00000493732 A0A1B0GV72 72 aa6.74□□□□□ -1.33
NPHP3-209ENST00000493732 TRACP01848 142 aa6.74□□□□□ -1.33
NPHP3-209ENST00000493732 CRPP02741 224 aa6.74□□□□□ -1.33
NPHP3-209ENST00000493732 MIFP14174 115 aa6.74□□□□□ -1.33
NPHP3-209ENST00000493732 SETD2Q9BYW2 2564 aaPredicted RBP6.73□□□□□ -1.33
NPHP3-209ENST00000493732 INAFM1C9JVW0 142 aa6.73□□□□□ -1.33
NPHP3-209ENST00000493732 LINC00158P58513 81 aa6.73□□□□□ -1.33
NPHP3-209ENST00000493732 SOSTDC1Q6X4U4 206 aa6.73□□□□□ -1.33
NPHP3-209ENST00000493732 NOTCH3Q9UM47 2321 aa6.72□□□□□ -1.33
NPHP3-209ENST00000493732 DAD1P61803 113 aa6.72□□□□□ -1.33
NPHP3-209ENST00000493732 C6orf226Q5I0X4 101 aa6.72□□□□□ -1.33
NPHP3-209ENST00000493732 Q8IZM0 81 aa6.72□□□□□ -1.33
NPHP3-209ENST00000493732 MIR7-3HGQ8N6C7 128 aa6.72□□□□□ -1.33
NPHP3-209ENST00000493732 CLEC2BQ92478 149 aa6.72□□□□□ -1.33
NPHP3-209ENST00000493732 CITED1Q99966 193 aa6.72□□□□□ -1.33
NPHP3-209ENST00000493732 ITPR2Q14571 2701 aa6.72□□□□□ -1.33
NPHP3-209ENST00000493732 SETXQ7Z333 2677 aaKnown RBP6.72□□□□□ -1.33
NPHP3-209ENST00000493732 HELZ2Q9BYK8 2649 aaKnown RBP6.72□□□□□ -1.33
NPHP3-209ENST00000493732 TRAV8-4A0A0B4J246 113 aa6.72□□□□□ -1.33
NPHP3-209ENST00000493732 ATP5G1P05496 136 aa6.72□□□□□ -1.33
NPHP3-209ENST00000493732 RPL28P46779 137 aaKnown RBP6.72□□□□□ -1.33
NPHP3-209ENST00000493732 DEFB121Q5J5C9 76 aa6.72□□□□□ -1.33
NPHP3-209ENST00000493732 SND1-IT1Q9HBX3 110 aa6.72□□□□□ -1.33
NPHP3-209ENST00000493732 JMJD1CQ15652 2540 aa6.72□□□□□ -1.33
NPHP3-209ENST00000493732 FAM240AA0A1B0GVK7 77 aa6.71□□□□□ -1.34
NPHP3-209ENST00000493732 WIPF1O43516 503 aa6.71□□□□□ -1.34
NPHP3-209ENST00000493732 CXCL5P42830 114 aa6.71□□□□□ -1.34
NPHP3-209ENST00000493732 WFDC9Q8NEX5 89 aa6.71□□□□□ -1.34
NPHP3-209ENST00000493732 H0YGX0 51 aa6.7□□□□□ -1.34
NPHP3-209ENST00000493732 SPART-AS1P0CW21 52 aa6.7□□□□□ -1.34
NPHP3-209ENST00000493732 MRPL23Q16540 153 aaKnown RBP6.7□□□□□ -1.34
NPHP3-209ENST00000493732 DEFB135Q30KP9 77 aa6.7□□□□□ -1.34
NPHP3-209ENST00000493732 C5orf38Q86SI9 138 aa6.7□□□□□ -1.34
NPHP3-209ENST00000493732 IGHV4-28A0A0C4DH34 117 aa6.7□□□□□ -1.34
NPHP3-209ENST00000493732 TEX49A0A1B0GTD5 131 aa6.7□□□□□ -1.34
NPHP3-209ENST00000493732 CD164L2Q6UWJ8 174 aa6.7□□□□□ -1.34
NPHP3-209ENST00000493732 NBPF19A0A087WUL8 3843 aa6.69□□□□□ -1.34
NPHP3-209ENST00000493732 ACYP1P07311 99 aa6.69□□□□□ -1.34
NPHP3-209ENST00000493732 COX17Q14061 63 aa6.69□□□□□ -1.34
NPHP3-209ENST00000493732 SNCGO76070 127 aa6.68□□□□□ -1.34
NPHP3-209ENST00000493732 XCL1P47992 114 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms