RNA–Protein interactions for RNA: ENST00000489206.1

SYNGR1-207, Transcript of synaptogyrin 1, humanhuman

TSL 2

Gene SYNGR1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-207ENST00000489206 ICOSQ9Y6W8 199 aa13.91□□□□□ -0.18
SYNGR1-207ENST00000489206 ANK3Q12955 4377 aaKnown RBP13.9□□□□□ -0.18
SYNGR1-207ENST00000489206 C9JAW5 83 aa13.9□□□□□ -0.18
SYNGR1-207ENST00000489206 TRIAP1O43715 76 aa13.9□□□□□ -0.18
SYNGR1-207ENST00000489206 ANKRD29Q8N6D5 301 aa13.89□□□□□ -0.19
SYNGR1-207ENST00000489206 CARD19Q96LW7 228 aa13.89□□□□□ -0.19
SYNGR1-207ENST00000489206 Q9H8V8 135 aa13.89□□□□□ -0.19
SYNGR1-207ENST00000489206 TRAV13-1A0A0B4J241 112 aa13.89□□□□□ -0.19
SYNGR1-207ENST00000489206 COX6CP09669 75 aa13.89□□□□□ -0.19
SYNGR1-207ENST00000489206 NF1P21359 2839 aa13.88□□□□□ -0.19
SYNGR1-207ENST00000489206 TRGV4A0A0C4DH28 118 aa13.88□□□□□ -0.19
SYNGR1-207ENST00000489206 LINC01620Q4KN68 170 aa13.88□□□□□ -0.19
SYNGR1-207ENST00000489206 F5H768 121 aa13.87□□□□□ -0.19
SYNGR1-207ENST00000489206 HERV-K104P63124 156 aa13.87□□□□□ -0.19
SYNGR1-207ENST00000489206 NPC2P61916 151 aa13.86□□□□□ -0.19
SYNGR1-207ENST00000489206 PPDPFQ9H3Y8 114 aa13.86□□□□□ -0.19
SYNGR1-207ENST00000489206 LINC00308Q8TCZ7 52 aa13.85□□□□□ -0.19
SYNGR1-207ENST00000489206 ZNF625Q96I27 306 aaPredicted RBP13.85□□□□□ -0.19
SYNGR1-207ENST00000489206 FHL2Q14192 279 aa13.85□□□□□ -0.19
SYNGR1-207ENST00000489206 TRBV10-2A0A0K0K1G8 114 aa13.84□□□□□ -0.19
SYNGR1-207ENST00000489206 LOC100131303A0A0U1RQF7 123 aa13.83□□□□□ -0.19
SYNGR1-207ENST00000489206 RPL13AP40429 203 aaKnown RBP13.83□□□□□ -0.19
SYNGR1-207ENST00000489206 SMR3AQ99954 134 aa13.83□□□□□ -0.19
SYNGR1-207ENST00000489206 CDIP1Q9H305 208 aa13.83□□□□□ -0.19
SYNGR1-207ENST00000489206 PRIMA1Q86XR5 153 aa13.83□□□□□ -0.2
SYNGR1-207ENST00000489206 KIR2DL5BQ8NHK3 375 aa13.83□□□□□ -0.2
SYNGR1-207ENST00000489206 MTORP42345 2549 aa13.82□□□□□ -0.2
SYNGR1-207ENST00000489206 PF4P02776 101 aa13.82□□□□□ -0.2
SYNGR1-207ENST00000489206 DAND5Q8N907 189 aa13.82□□□□□ -0.2
SYNGR1-207ENST00000489206 LINC00482Q8N8I6 264 aa13.82□□□□□ -0.2
SYNGR1-207ENST00000489206 TRBV6-8A0A0A6YYG3 113 aa13.81□□□□□ -0.2
SYNGR1-207ENST00000489206 CUBNO60494 3623 aa13.8□□□□□ -0.2
SYNGR1-207ENST00000489206 TMEM262E9PQX1 116 aa13.8□□□□□ -0.2
SYNGR1-207ENST00000489206 MEIG1Q5JSS6 88 aa13.8□□□□□ -0.2
SYNGR1-207ENST00000489206 LINC00612Q8N6U2 182 aa13.8□□□□□ -0.2
SYNGR1-207ENST00000489206 H3BT86 120 aa13.79□□□□□ -0.2
SYNGR1-207ENST00000489206 LST1O00453 97 aa13.79□□□□□ -0.2
SYNGR1-207ENST00000489206 NOTCH3Q9UM47 2321 aa13.79□□□□□ -0.2
SYNGR1-207ENST00000489206 JMJD1CQ15652 2540 aa13.79□□□□□ -0.2
SYNGR1-207ENST00000489206 KRTAP10-3P60369 221 aa13.78□□□□□ -0.2
SYNGR1-207ENST00000489206 GAGE6Q13070 117 aa13.78□□□□□ -0.2
SYNGR1-207ENST00000489206 SMIM9A6NGZ8 99 aa13.76□□□□□ -0.21
SYNGR1-207ENST00000489206 NTN5Q8WTR8 489 aaPredicted RBP13.76□□□□□ -0.21
SYNGR1-207ENST00000489206 SETD2Q9BYW2 2564 aaPredicted RBP13.76□□□□□ -0.21
SYNGR1-207ENST00000489206 COX7B2Q8TF08 81 aa13.76□□□□□ -0.21
SYNGR1-207ENST00000489206 CRLF1O75462 422 aa13.75□□□□□ -0.21
SYNGR1-207ENST00000489206 SOSTDC1Q6X4U4 206 aa13.75□□□□□ -0.21
SYNGR1-207ENST00000489206 SVIPQ8NHG7 77 aa13.75□□□□□ -0.21
SYNGR1-207ENST00000489206 CHCHD5Q9BSY4 110 aa13.75□□□□□ -0.21
SYNGR1-207ENST00000489206 C2orf82Q6UX34 121 aa13.74□□□□□ -0.21
SYNGR1-207ENST00000489206 IGLV4-60A0A075B6I1 120 aa13.73□□□□□ -0.21
SYNGR1-207ENST00000489206 A0A0U1RRA0 63 aa13.73□□□□□ -0.21
SYNGR1-207ENST00000489206 CLEC2BQ92478 149 aa13.73□□□□□ -0.21
SYNGR1-207ENST00000489206 UBE2WQ96B02 151 aa13.73□□□□□ -0.21
SYNGR1-207ENST00000489206 DEFB130BP0DP73 79 aa13.72□□□□□ -0.21
SYNGR1-207ENST00000489206 DEFB130AP0DP74 79 aa13.72□□□□□ -0.21
SYNGR1-207ENST00000489206 SHISA2Q6UWI4 295 aa13.72□□□□□ -0.21
SYNGR1-207ENST00000489206 IGHV3OR16-9A0A0B4J2B5 98 aa13.71□□□□□ -0.21
SYNGR1-207ENST00000489206 COX7A2LO14548 114 aa13.71□□□□□ -0.21
SYNGR1-207ENST00000489206 C9orf66Q5T8R8 295 aa13.71□□□□□ -0.21
SYNGR1-207ENST00000489206 X6R8D5 127 aa13.71□□□□□ -0.21
SYNGR1-207ENST00000489206 FN1P02751 2386 aaKnown RBP13.71□□□□□ -0.22
SYNGR1-207ENST00000489206 LY6G6DO95868 133 aa13.71□□□□□ -0.22
SYNGR1-207ENST00000489206 XGP55808 180 aa13.71□□□□□ -0.22
SYNGR1-207ENST00000489206 HIVEP2P31629 2446 aa13.7□□□□□ -0.22
SYNGR1-207ENST00000489206 A0A087WZ39 114 aa13.7□□□□□ -0.22
SYNGR1-207ENST00000489206 FAM222AQ5U5X8 452 aa13.7□□□□□ -0.22
SYNGR1-207ENST00000489206 NSD1Q96L73 2696 aaPredicted RBP13.69□□□□□ -0.22
SYNGR1-207ENST00000489206 MT-ATP8P03928 68 aa13.69□□□□□ -0.22
SYNGR1-207ENST00000489206 GYPEP15421 78 aa13.69□□□□□ -0.22
SYNGR1-207ENST00000489206 PRO0255Q9UI72 69 aa13.68□□□□□ -0.22
SYNGR1-207ENST00000489206 IGKV3OR2-268A0A0C4DH90 116 aa13.67□□□□□ -0.22
SYNGR1-207ENST00000489206 TEX49A0A1B0GTD5 131 aa13.67□□□□□ -0.22
SYNGR1-207ENST00000489206 A0A1B0GUV1 79 aa13.67□□□□□ -0.22
SYNGR1-207ENST00000489206 LYRM9A8MSI8 78 aa13.67□□□□□ -0.22
SYNGR1-207ENST00000489206 TRAV13-2A0A0B4J235 113 aa13.67□□□□□ -0.22
SYNGR1-207ENST00000489206 TOMM7Q9P0U1 55 aa13.67□□□□□ -0.22
SYNGR1-207ENST00000489206 C2CD3Q4AC94 2353 aa13.67□□□□□ -0.22
SYNGR1-207ENST00000489206 NIPBLQ6KC79 2804 aaeCLIP13.66□□□□□ -0.22
SYNGR1-207ENST00000489206 LINC00959A0A1B0GUT2 108 aa13.66□□□□□ -0.22
SYNGR1-207ENST00000489206 IBA57-AS1B1ANH7 110 aa13.65□□□□□ -0.22
SYNGR1-207ENST00000489206 TRAV8-4A0A0B4J246 113 aa13.65□□□□□ -0.22
SYNGR1-207ENST00000489206 DEFB121Q5J5C9 76 aa13.65□□□□□ -0.22
SYNGR1-207ENST00000489206 MIR7-3HGQ8N6C7 128 aa13.65□□□□□ -0.22
SYNGR1-207ENST00000489206 A0A1B0GV72 72 aa13.63□□□□□ -0.23
SYNGR1-207ENST00000489206 TRACP01848 142 aa13.63□□□□□ -0.23
SYNGR1-207ENST00000489206 LINC01561Q8N1V8 128 aa13.63□□□□□ -0.23
SYNGR1-207ENST00000489206 CRPP02741 224 aa13.63□□□□□ -0.23
SYNGR1-207ENST00000489206 SS18Q15532 418 aa13.63□□□□□ -0.23
SYNGR1-207ENST00000489206 APOC4P55056 127 aa13.62□□□□□ -0.23
SYNGR1-207ENST00000489206 RPL28P46779 137 aaKnown RBP13.61□□□□□ -0.23
SYNGR1-207ENST00000489206 LINC00158P58513 81 aa13.61□□□□□ -0.23
SYNGR1-207ENST00000489206 C5orf38Q86SI9 138 aa13.61□□□□□ -0.23
SYNGR1-207ENST00000489206 SND1-IT1Q9HBX3 110 aa13.61□□□□□ -0.23
SYNGR1-207ENST00000489206 FAM240AA0A1B0GVK7 77 aa13.6□□□□□ -0.23
SYNGR1-207ENST00000489206 PAX4O43316 350 aa13.6□□□□□ -0.23
SYNGR1-207ENST00000489206 INAFM1C9JVW0 142 aa13.59□□□□□ -0.23
SYNGR1-207ENST00000489206 CITED1Q99966 193 aa13.58□□□□□ -0.24
SYNGR1-207ENST00000489206 IGKV2-28A0A075B6P5 120 aa13.57□□□□□ -0.24
SYNGR1-207ENST00000489206 TRAV26-1A0A087WT03 109 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms