RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 CFAP43Q8NDM7 1665 aa1.45□□□□□ -2.18
PRPF4-203ENST00000488937 ANKRD36A6QL64 1941 aa1.44□□□□□ -2.18
PRPF4-203ENST00000488937 CAV3P56539 151 aa1.44□□□□□ -2.18
PRPF4-203ENST00000488937 KRTAP12-1P59990 96 aa1.44□□□□□ -2.18
PRPF4-203ENST00000488937 SFTA2Q6UW10 78 aa1.44□□□□□ -2.18
PRPF4-203ENST00000488937 Q6ZQY7 126 aa1.44□□□□□ -2.18
PRPF4-203ENST00000488937 LINC01558Q9Y6Z2 57 aa1.44□□□□□ -2.18
PRPF4-203ENST00000488937 R4GMQ9 66 aa1.44□□□□□ -2.18
PRPF4-203ENST00000488937 PREX1Q8TCU6 1659 aa1.43□□□□□ -2.18
PRPF4-203ENST00000488937 F2Z2F3 143 aa1.43□□□□□ -2.18
PRPF4-203ENST00000488937 SAA2P0DJI9 122 aaPredicted RBP1.43□□□□□ -2.18
PRPF4-203ENST00000488937 IGLC2P0DOY2 106 aa1.43□□□□□ -2.18
PRPF4-203ENST00000488937 IGLC3P0DOY3 106 aa1.43□□□□□ -2.18
PRPF4-203ENST00000488937 SNRPFP62306 86 aaKnown RBP1.43□□□□□ -2.18
PRPF4-203ENST00000488937 ADIRFQ15847 76 aa1.43□□□□□ -2.18
PRPF4-203ENST00000488937 PMCHL1Q16048 86 aa1.43□□□□□ -2.18
PRPF4-203ENST00000488937 TMEM170BQ5T4T1 132 aa1.43□□□□□ -2.18
PRPF4-203ENST00000488937 ABCA1O95477 2261 aa1.43□□□□□ -2.18
PRPF4-203ENST00000488937 NHSL1Q5SYE7 1610 aa1.43□□□□□ -2.18
PRPF4-203ENST00000488937 ABCA5Q8WWZ7 1642 aa1.43□□□□□ -2.18
PRPF4-203ENST00000488937 MADDQ8WXG6 1647 aa1.43□□□□□ -2.18
PRPF4-203ENST00000488937 ASCC3Q8N3C0 2202 aaKnown RBP1.43□□□□□ -2.18
PRPF4-203ENST00000488937 SHPRHQ149N8 1683 aa1.42□□□□□ -2.18
PRPF4-203ENST00000488937 ARFGEF2Q9Y6D5 1785 aa1.42□□□□□ -2.18
PRPF4-203ENST00000488937 TOP2AP11388 1531 aaKnown RBP1.42□□□□□ -2.18
PRPF4-203ENST00000488937 NEXMIFQ5QGS0 1516 aa1.42□□□□□ -2.18
PRPF4-203ENST00000488937 ZMYM4Q5VZL5 1548 aa1.42□□□□□ -2.18
PRPF4-203ENST00000488937 CACNA1BQ00975 2339 aa1.42□□□□□ -2.18
PRPF4-203ENST00000488937 IQGAP3Q86VI3 1631 aa1.42□□□□□ -2.18
PRPF4-203ENST00000488937 F8VRH5 84 aa1.42□□□□□ -2.18
PRPF4-203ENST00000488937 FXYD1O00168 92 aa1.42□□□□□ -2.18
PRPF4-203ENST00000488937 BVES-AS1Q5T3Y7 98 aa1.42□□□□□ -2.18
PRPF4-203ENST00000488937 CFAP126Q5VTH2 177 aa1.42□□□□□ -2.18
PRPF4-203ENST00000488937 MYO5CQ9NQX4 1742 aa1.42□□□□□ -2.18
PRPF4-203ENST00000488937 ANKARQ7Z5J8 1434 aa1.41□□□□□ -2.18
PRPF4-203ENST00000488937 AGLP35573 1532 aa1.41□□□□□ -2.18
PRPF4-203ENST00000488937 RAPGEF6Q8TEU7 1601 aa1.41□□□□□ -2.18
PRPF4-203ENST00000488937 ALKQ9UM73 1620 aa1.41□□□□□ -2.18
PRPF4-203ENST00000488937 KNDC1Q76NI1 1749 aa1.41□□□□□ -2.18
PRPF4-203ENST00000488937 CRYBG1Q9Y4K1 1723 aa1.41□□□□□ -2.18
PRPF4-203ENST00000488937 A0A096LNT2 108 aa1.41□□□□□ -2.18
PRPF4-203ENST00000488937 M0R135 149 aa1.41□□□□□ -2.18
PRPF4-203ENST00000488937 ZNF137PP52743 207 aa1.41□□□□□ -2.18
PRPF4-203ENST00000488937 Q5BKY6 102 aa1.41□□□□□ -2.18
PRPF4-203ENST00000488937 SPRR4Q96PI1 79 aa1.41□□□□□ -2.18
PRPF4-203ENST00000488937 ARL2-SNX15V9GYD0 113 aa1.41□□□□□ -2.18
PRPF4-203ENST00000488937 CACNA1CQ13936 2221 aa1.41□□□□□ -2.18
PRPF4-203ENST00000488937 LRRC9Q6ZRR7 1453 aa1.41□□□□□ -2.18
PRPF4-203ENST00000488937 SCN11AQ9UI33 1791 aa1.41□□□□□ -2.18
PRPF4-203ENST00000488937 EFCAB5A4FU69 1503 aa1.4□□□□□ -2.18
PRPF4-203ENST00000488937 KIAA0556O60303 1618 aa1.4□□□□□ -2.18
PRPF4-203ENST00000488937 KIF21BO75037 1637 aa1.4□□□□□ -2.18
PRPF4-203ENST00000488937 NWD1Q149M9 1564 aa1.4□□□□□ -2.19
PRPF4-203ENST00000488937 TRGV1A0A0A0MS02 117 aa1.4□□□□□ -2.19
PRPF4-203ENST00000488937 SMIM31A0A1B0GVY4 71 aa1.4□□□□□ -2.19
PRPF4-203ENST00000488937 KANTRA0A1W2PQU2 76 aa1.4□□□□□ -2.19
PRPF4-203ENST00000488937 FAM223BA6NKX1 122 aa1.4□□□□□ -2.19
PRPF4-203ENST00000488937 SMIM11AP58511 58 aa1.4□□□□□ -2.19
PRPF4-203ENST00000488937 LINC00643Q86TS7 51 aa1.4□□□□□ -2.19
PRPF4-203ENST00000488937 BAGE3Q86Y29 109 aa1.4□□□□□ -2.19
PRPF4-203ENST00000488937 PLXNB2O15031 1838 aa1.4□□□□□ -2.19
PRPF4-203ENST00000488937 UGGT2Q9NYU1 1516 aa1.4□□□□□ -2.19
PRPF4-203ENST00000488937 FLG2Q5D862 2391 aaPredicted RBP1.4□□□□□ -2.19
PRPF4-203ENST00000488937 ZNF815PA8K554 130 aa1.39□□□□□ -2.19
PRPF4-203ENST00000488937 F8WEM9 126 aa1.39□□□□□ -2.19
PRPF4-203ENST00000488937 UQCR11O14957 56 aa1.39□□□□□ -2.19
PRPF4-203ENST00000488937 HMGN2P05204 90 aaKnown RBP1.39□□□□□ -2.19
PRPF4-203ENST00000488937 ACYP1P07311 99 aa1.39□□□□□ -2.19
PRPF4-203ENST00000488937 PSMG4Q5JS54 123 aa1.39□□□□□ -2.19
PRPF4-203ENST00000488937 BAGE2Q86Y30 109 aa1.39□□□□□ -2.19
PRPF4-203ENST00000488937 LINC00472Q9H8W2 130 aa1.39□□□□□ -2.19
PRPF4-203ENST00000488937 SMCO4Q9NRQ5 59 aa1.39□□□□□ -2.19
PRPF4-203ENST00000488937 PSENENQ9NZ42 101 aa1.39□□□□□ -2.19
PRPF4-203ENST00000488937 ABCA9Q8IUA7 1624 aa1.39□□□□□ -2.19
PRPF4-203ENST00000488937 ABCC1P33527 1531 aa1.39□□□□□ -2.19
PRPF4-203ENST00000488937 LRRC7Q96NW7 1537 aa1.39□□□□□ -2.19
PRPF4-203ENST00000488937 F5P12259 2224 aa1.39□□□□□ -2.19
PRPF4-203ENST00000488937 SETBP1Q9Y6X0 1596 aa1.38□□□□□ -2.19
PRPF4-203ENST00000488937 RALGAPBQ86X10 1494 aa1.38□□□□□ -2.19
PRPF4-203ENST00000488937 DNAJC13O75165 2243 aa1.38□□□□□ -2.19
PRPF4-203ENST00000488937 HMGN3Q15651 99 aa1.38□□□□□ -2.19
PRPF4-203ENST00000488937 LINC00575Q6W349 94 aa1.38□□□□□ -2.19
PRPF4-203ENST00000488937 PLAC8Q9NZF1 115 aa1.38□□□□□ -2.19
PRPF4-203ENST00000488937 CLIP1P30622 1438 aa1.38□□□□□ -2.19
PRPF4-203ENST00000488937 SSC5DA1L4H1 1573 aa1.38□□□□□ -2.19
PRPF4-203ENST00000488937 KMT2BQ9UMN6 2715 aaPredicted RBP1.38□□□□□ -2.19
PRPF4-203ENST00000488937 FCGBPQ9Y6R7 5405 aaPredicted RBP1.37□□□□□ -2.19
PRPF4-203ENST00000488937 LRRC37A2A6NM11 1700 aa1.37□□□□□ -2.19
PRPF4-203ENST00000488937 EP400Q96L91 3159 aa1.37□□□□□ -2.19
PRPF4-203ENST00000488937 DEPDC5O75140 1603 aa1.37□□□□□ -2.19
PRPF4-203ENST00000488937 RNF17Q9BXT8 1623 aaKnown RBP1.37□□□□□ -2.19
PRPF4-203ENST00000488937 TECTAO75443 2155 aa1.37□□□□□ -2.19
PRPF4-203ENST00000488937 TRAV1-2A0A0B4J238 106 aa1.37□□□□□ -2.19
PRPF4-203ENST00000488937 TRBV30A0A0K0K1B3 111 aa1.37□□□□□ -2.19
PRPF4-203ENST00000488937 H3BUT2 72 aa1.37□□□□□ -2.19
PRPF4-203ENST00000488937 CFDP00746 253 aaPredicted RBP1.37□□□□□ -2.19
PRPF4-203ENST00000488937 PRB1P04280 392 aa1.37□□□□□ -2.19
PRPF4-203ENST00000488937 ARMS2P0C7Q2 107 aa1.37□□□□□ -2.19
PRPF4-203ENST00000488937 C18orf32Q8TCD1 76 aa1.37□□□□□ -2.19
PRPF4-203ENST00000488937 LINC00846Q9NV44 126 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms