RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 DEFB131BA0A096LNP1 70 aa8□□□□□ -1.13
PRKCB-207ENST00000486868 TRAV8-3A0A0A6YYJ7 113 aa8□□□□□ -1.13
PRKCB-207ENST00000486868 TRAV10A0A0B4J240 114 aa8□□□□□ -1.13
PRKCB-207ENST00000486868 A0A1B0GV90 55 aa8□□□□□ -1.13
PRKCB-207ENST00000486868 SMIM1B2RUZ4 78 aa8□□□□□ -1.13
PRKCB-207ENST00000486868 TMEM238C9JI98 176 aa8□□□□□ -1.13
PRKCB-207ENST00000486868 NDUFA1O15239 70 aa8□□□□□ -1.13
PRKCB-207ENST00000486868 SPINK8P0C7L1 97 aa8□□□□□ -1.13
PRKCB-207ENST00000486868 DEFB121Q5J5C9 76 aa8□□□□□ -1.13
PRKCB-207ENST00000486868 SFTA2Q6UW10 78 aa8□□□□□ -1.13
PRKCB-207ENST00000486868 A0A0J9YXY3 114 aa7.99□□□□□ -1.13
PRKCB-207ENST00000486868 TMEM238LA0A1B0GVL6 79 aa7.99□□□□□ -1.13
PRKCB-207ENST00000486868 A0A1B0GWB2 263 aa7.99□□□□□ -1.13
PRKCB-207ENST00000486868 A6NJY4 79 aa7.99□□□□□ -1.13
PRKCB-207ENST00000486868 TAX1BP3O14907 124 aa7.99□□□□□ -1.13
PRKCB-207ENST00000486868 GCSHP23434 173 aa7.99□□□□□ -1.13
PRKCB-207ENST00000486868 KRTAP21-3Q3LHN1 58 aa7.99□□□□□ -1.13
PRKCB-207ENST00000486868 C10orf126Q8N4M7 172 aa7.99□□□□□ -1.13
PRKCB-207ENST00000486868 C15orf53Q8NAA6 179 aa7.99□□□□□ -1.13
PRKCB-207ENST00000486868 COX11Q9Y6N1 276 aa7.99□□□□□ -1.13
PRKCB-207ENST00000486868 SMIM13P0DJ93 91 aa7.98□□□□□ -1.13
PRKCB-207ENST00000486868 FXYD2P54710 66 aa7.98□□□□□ -1.13
PRKCB-207ENST00000486868 NANOS2P60321 138 aaKnown RBP7.98□□□□□ -1.13
PRKCB-207ENST00000486868 HERV-K104P63124 156 aa7.98□□□□□ -1.13
PRKCB-207ENST00000486868 SRSF9Q13242 221 aaKnown RBP eCLIP7.98□□□□□ -1.13
PRKCB-207ENST00000486868 PPDPFQ9H3Y8 114 aa7.98□□□□□ -1.13
PRKCB-207ENST00000486868 NBEAL2Q6ZNJ1 2754 aa7.98□□□□□ -1.13
PRKCB-207ENST00000486868 IGHV3-64A0A075B6Q5 118 aa7.97□□□□□ -1.13
PRKCB-207ENST00000486868 IGHV3-30P01768 117 aa7.97□□□□□ -1.13
PRKCB-207ENST00000486868 IGHV3-30-5P0DP03 117 aa7.97□□□□□ -1.13
PRKCB-207ENST00000486868 PTTG1IPP53801 180 aa7.97□□□□□ -1.13
PRKCB-207ENST00000486868 CD164L2Q6UWJ8 174 aa7.97□□□□□ -1.13
PRKCB-207ENST00000486868 B9D2Q9BPU9 175 aa7.97□□□□□ -1.13
PRKCB-207ENST00000486868 SPANXDQ9BXN6 97 aa7.97□□□□□ -1.13
PRKCB-207ENST00000486868 PRR34Q9NV39 138 aa7.97□□□□□ -1.13
PRKCB-207ENST00000486868 SPANXCQ9NY87 97 aa7.97□□□□□ -1.13
PRKCB-207ENST00000486868 PRB2P02812 416 aaPredicted RBP7.96□□□□□ -1.14
PRKCB-207ENST00000486868 IFITM1P13164 125 aa7.96□□□□□ -1.14
PRKCB-207ENST00000486868 ZNF625Q96I27 306 aaPredicted RBP7.96□□□□□ -1.14
PRKCB-207ENST00000486868 C9orf118A6NHY6 69 aa7.95□□□□□ -1.14
PRKCB-207ENST00000486868 REG3AQ06141 175 aa7.95□□□□□ -1.14
PRKCB-207ENST00000486868 CIRBPQ14011 172 aaKnown RBP7.95□□□□□ -1.14
PRKCB-207ENST00000486868 COPS9Q8WXC6 57 aa7.95□□□□□ -1.14
PRKCB-207ENST00000486868 LITAFQ99732 161 aa7.95□□□□□ -1.14
PRKCB-207ENST00000486868 TRAV8-4A0A0B4J246 113 aa7.94□□□□□ -1.14
PRKCB-207ENST00000486868 ANGP03950 147 aaKnown RBP7.94□□□□□ -1.14
PRKCB-207ENST00000486868 NHLRC4P0CG21 123 aaPredicted RBP7.94□□□□□ -1.14
PRKCB-207ENST00000486868 RPL24P83731 157 aaKnown RBP7.94□□□□□ -1.14
PRKCB-207ENST00000486868 LINC00269Q8N2A0 174 aa7.94□□□□□ -1.14
PRKCB-207ENST00000486868 COX7B2Q8TF08 81 aa7.94□□□□□ -1.14
PRKCB-207ENST00000486868 MRAPQ8TCY5 172 aa7.93□□□□□ -1.14
PRKCB-207ENST00000486868 Q9H8V8 135 aa7.93□□□□□ -1.14
PRKCB-207ENST00000486868 PKD1L1Q8TDX9 2849 aa7.92□□□□□ -1.14
PRKCB-207ENST00000486868 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.92□□□□□ -1.14
PRKCB-207ENST00000486868 IGKV3OR2-268A0A0C4DH90 116 aa7.92□□□□□ -1.14
PRKCB-207ENST00000486868 MIAQ16674 131 aa7.92□□□□□ -1.14
PRKCB-207ENST00000486868 ESRGQ1W209 222 aa7.92□□□□□ -1.14
PRKCB-207ENST00000486868 LINC01556Q5JQF7 62 aa7.92□□□□□ -1.14
PRKCB-207ENST00000486868 Q8IZM0 81 aa7.92□□□□□ -1.14
PRKCB-207ENST00000486868 CHCHD10Q8WYQ3 142 aaPredicted RBP7.92□□□□□ -1.14
PRKCB-207ENST00000486868 NHP2Q9NX24 153 aaKnown RBP7.92□□□□□ -1.14
PRKCB-207ENST00000486868 K7EP13 123 aa7.91□□□□□ -1.14
PRKCB-207ENST00000486868 COX7A2LO14548 114 aa7.91□□□□□ -1.14
PRKCB-207ENST00000486868 CXCL5P42830 114 aa7.91□□□□□ -1.14
PRKCB-207ENST00000486868 MGAM2Q2M2H8 2515 aa7.91□□□□□ -1.14
PRKCB-207ENST00000486868 A0A0B4J2C4 111 aa7.9□□□□□ -1.14
PRKCB-207ENST00000486868 XCL1P47992 114 aa7.9□□□□□ -1.14
PRKCB-207ENST00000486868 FOXI1Q12951 378 aa7.9□□□□□ -1.14
PRKCB-207ENST00000486868 C5orf38Q86SI9 138 aa7.9□□□□□ -1.14
PRKCB-207ENST00000486868 KLK5Q9Y337 293 aaPredicted RBP7.9□□□□□ -1.14
PRKCB-207ENST00000486868 IBA57-AS1B1ANH7 110 aa7.89□□□□□ -1.15
PRKCB-207ENST00000486868 APOMO95445 188 aa7.89□□□□□ -1.15
PRKCB-207ENST00000486868 DNAH10OSP0CZ25 163 aa7.89□□□□□ -1.15
PRKCB-207ENST00000486868 ENHOQ6UWT2 76 aa7.89□□□□□ -1.15
PRKCB-207ENST00000486868 MUSTN1Q8IVN3 82 aa7.89□□□□□ -1.15
PRKCB-207ENST00000486868 KLK12Q9UKR0 248 aa7.89□□□□□ -1.15
PRKCB-207ENST00000486868 NOTCH1P46531 2555 aa7.88□□□□□ -1.15
PRKCB-207ENST00000486868 IGLL5B9A064 214 aa7.88□□□□□ -1.15
PRKCB-207ENST00000486868 CRPP02741 224 aa7.88□□□□□ -1.15
PRKCB-207ENST00000486868 UBE2V1Q13404 147 aa7.88□□□□□ -1.15
PRKCB-207ENST00000486868 ADAMTSL4-AS1Q5T5F5 129 aa7.88□□□□□ -1.15
PRKCB-207ENST00000486868 WFDC10BQ8IUB3 73 aa7.88□□□□□ -1.15
PRKCB-207ENST00000486868 MUC7Q8TAX7 377 aa7.88□□□□□ -1.15
PRKCB-207ENST00000486868 UPK3BQ9BT76 320 aa7.88□□□□□ -1.15
PRKCB-207ENST00000486868 A0A1W2PPM0 123 aa7.87□□□□□ -1.15
PRKCB-207ENST00000486868 A4D1N5 150 aa7.87□□□□□ -1.15
PRKCB-207ENST00000486868 PRSS2P07478 247 aa7.87□□□□□ -1.15
PRKCB-207ENST00000486868 CFC1BP0CG36 223 aa7.87□□□□□ -1.15
PRKCB-207ENST00000486868 CFC1P0CG37 223 aa7.87□□□□□ -1.15
PRKCB-207ENST00000486868 CCL18P55774 89 aa7.87□□□□□ -1.15
PRKCB-207ENST00000486868 KIAA0087Q14695 138 aa7.87□□□□□ -1.15
PRKCB-207ENST00000486868 VAMP3Q15836 100 aa7.87□□□□□ -1.15
PRKCB-207ENST00000486868 C6orf226Q5I0X4 101 aa7.87□□□□□ -1.15
PRKCB-207ENST00000486868 Q8N3U1 123 aa7.87□□□□□ -1.15
PRKCB-207ENST00000486868 H3BUT2 72 aa7.86□□□□□ -1.15
PRKCB-207ENST00000486868 FABP2P12104 132 aa7.86□□□□□ -1.15
PRKCB-207ENST00000486868 MALP21145 153 aa7.86□□□□□ -1.15
PRKCB-207ENST00000486868 MEIG1Q5JSS6 88 aa7.86□□□□□ -1.15
PRKCB-207ENST00000486868 CLPSL2Q6UWE3 100 aa7.86□□□□□ -1.15
PRKCB-207ENST00000486868 GTF2H5Q6ZYL4 71 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms