RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 SONP18583 2426 aaKnown RBP13.72□□□□□ -0.21
TNFRSF8-204ENST00000479933 HILS1P60008 231 aa13.72□□□□□ -0.21
TNFRSF8-204ENST00000479933 K7EQD1 137 aa13.71□□□□□ -0.21
TNFRSF8-204ENST00000479933 DAZ2Q13117 558 aaKnown RBP13.71□□□□□ -0.21
TNFRSF8-204ENST00000479933 DGAT2L7PQ6IED9 249 aa13.71□□□□□ -0.21
TNFRSF8-204ENST00000479933 FAM19A5Q7Z5A7 132 aaPredicted RBP13.71□□□□□ -0.21
TNFRSF8-204ENST00000479933 CRYGAP11844 174 aa13.7□□□□□ -0.22
TNFRSF8-204ENST00000479933 RNASE13Q5GAN3 156 aaKnown RBP13.7□□□□□ -0.22
TNFRSF8-204ENST00000479933 DAZ4Q86SG3 579 aaKnown RBP13.7□□□□□ -0.22
TNFRSF8-204ENST00000479933 VSIG2Q96IQ7 327 aa13.7□□□□□ -0.22
TNFRSF8-204ENST00000479933 DAZ3Q9NR90 486 aaKnown RBP13.7□□□□□ -0.22
TNFRSF8-204ENST00000479933 TIRAPP58753 221 aa13.7□□□□□ -0.22
TNFRSF8-204ENST00000479933 OR13C6PQ8NH95 151 aa13.7□□□□□ -0.22
TNFRSF8-204ENST00000479933 C16orf74Q96GX8 76 aa13.7□□□□□ -0.22
TNFRSF8-204ENST00000479933 CHD6Q8TD26 2715 aa13.7□□□□□ -0.22
TNFRSF8-204ENST00000479933 COX7CP15954 63 aa13.69□□□□□ -0.22
TNFRSF8-204ENST00000479933 Q6ZTI0 123 aa13.69□□□□□ -0.22
TNFRSF8-204ENST00000479933 LOC107984640A0A0U1RRK4 108 aa13.69□□□□□ -0.22
TNFRSF8-204ENST00000479933 C5orf38Q86SI9 138 aa13.69□□□□□ -0.22
TNFRSF8-204ENST00000479933 NDUFA12Q9UI09 145 aa13.68□□□□□ -0.22
TNFRSF8-204ENST00000479933 IGLV5-45A0A087WSX0 123 aa13.67□□□□□ -0.22
TNFRSF8-204ENST00000479933 WNK1Q9H4A3 2382 aa13.67□□□□□ -0.22
TNFRSF8-204ENST00000479933 TRAV8-3A0A0A6YYJ7 113 aa13.67□□□□□ -0.22
TNFRSF8-204ENST00000479933 GIG44P09565 113 aaPredicted RBP13.67□□□□□ -0.22
TNFRSF8-204ENST00000479933 C19orf73Q9NVV2 129 aa13.66□□□□□ -0.22
TNFRSF8-204ENST00000479933 ZNF469Q96JG9 3925 aaPredicted RBP13.66□□□□□ -0.22
TNFRSF8-204ENST00000479933 ADARB2-AS1A8MUL3 147 aa13.66□□□□□ -0.22
TNFRSF8-204ENST00000479933 NOP10Q9NPE3 64 aaKnown RBP13.66□□□□□ -0.22
TNFRSF8-204ENST00000479933 CCDC168Q8NDH2 2452 aa13.66□□□□□ -0.22
TNFRSF8-204ENST00000479933 HIST1H4AP62805 103 aaKnown RBP13.65□□□□□ -0.22
TNFRSF8-204ENST00000479933 MIAQ16674 131 aa13.65□□□□□ -0.22
TNFRSF8-204ENST00000479933 CLEC2BQ92478 149 aa13.65□□□□□ -0.22
TNFRSF8-204ENST00000479933 AKAP9Q99996 3911 aa13.65□□□□□ -0.22
TNFRSF8-204ENST00000479933 PDZD2O15018 2839 aa13.65□□□□□ -0.23
TNFRSF8-204ENST00000479933 C2orf48Q96LS8 159 aa13.64□□□□□ -0.23
TNFRSF8-204ENST00000479933 TENM4Q6N022 2769 aa13.64□□□□□ -0.23
TNFRSF8-204ENST00000479933 FAM19A3Q7Z5A8 133 aa13.64□□□□□ -0.23
TNFRSF8-204ENST00000479933 SMCR5Q8TEV8 140 aa13.64□□□□□ -0.23
TNFRSF8-204ENST00000479933 OVOL2Q9BRP0 275 aa13.64□□□□□ -0.23
TNFRSF8-204ENST00000479933 TIMM17BO60830 172 aa13.63□□□□□ -0.23
TNFRSF8-204ENST00000479933 RPL35AP18077 110 aaKnown RBP13.63□□□□□ -0.23
TNFRSF8-204ENST00000479933 GAGE2AQ6NT46 116 aa13.63□□□□□ -0.23
TNFRSF8-204ENST00000479933 CDKN2A-AS1Q9UH64 79 aa13.63□□□□□ -0.23
TNFRSF8-204ENST00000479933 PLAC8L1A1L4L8 177 aa13.61□□□□□ -0.23
TNFRSF8-204ENST00000479933 CSNK1G2-AS1Q8NCQ2 148 aa13.61□□□□□ -0.23
TNFRSF8-204ENST00000479933 TRGV2A0A075B6R0 118 aa13.61□□□□□ -0.23
TNFRSF8-204ENST00000479933 ATOX1O00244 68 aa13.61□□□□□ -0.23
TNFRSF8-204ENST00000479933 TRBV6-4A0A1B0GX49 114 aa13.6□□□□□ -0.23
TNFRSF8-204ENST00000479933 NDUFA1O15239 70 aa13.6□□□□□ -0.23
TNFRSF8-204ENST00000479933 NTM-AS1Q6ZSK4 140 aa13.6□□□□□ -0.23
TNFRSF8-204ENST00000479933 DAND5Q8N907 189 aa13.6□□□□□ -0.23
TNFRSF8-204ENST00000479933 WFDC10AQ9H1F0 79 aa13.6□□□□□ -0.23
TNFRSF8-204ENST00000479933 PRSS2P07478 247 aa13.59□□□□□ -0.23
TNFRSF8-204ENST00000479933 LINC00242Q5T6M2 205 aa13.59□□□□□ -0.23
TNFRSF8-204ENST00000479933 KLK5Q9Y337 293 aaPredicted RBP13.59□□□□□ -0.23
TNFRSF8-204ENST00000479933 TMEM258P61165 79 aa13.58□□□□□ -0.23
TNFRSF8-204ENST00000479933 TMEM243Q9BU79 118 aa13.58□□□□□ -0.23
TNFRSF8-204ENST00000479933 IGLV5-39A0A0G2JS06 123 aa13.58□□□□□ -0.24
TNFRSF8-204ENST00000479933 NF1P21359 2839 aa13.58□□□□□ -0.24
TNFRSF8-204ENST00000479933 UBE2L6O14933 153 aa13.57□□□□□ -0.24
TNFRSF8-204ENST00000479933 ADAMTSL4-AS1Q5T5F5 129 aa13.57□□□□□ -0.24
TNFRSF8-204ENST00000479933 CIRBPQ14011 172 aaKnown RBP13.57□□□□□ -0.24
TNFRSF8-204ENST00000479933 CDC42SE2Q9NRR3 84 aa13.57□□□□□ -0.24
TNFRSF8-204ENST00000479933 A8MZ25 164 aa13.56□□□□□ -0.24
TNFRSF8-204ENST00000479933 COX6A2Q02221 97 aa13.56□□□□□ -0.24
TNFRSF8-204ENST00000479933 TRGV4A0A0C4DH28 118 aa13.55□□□□□ -0.24
TNFRSF8-204ENST00000479933 PF4P02776 101 aa13.55□□□□□ -0.24
TNFRSF8-204ENST00000479933 NBPF19A0A087WUL8 3843 aa13.55□□□□□ -0.24
TNFRSF8-204ENST00000479933 FAM222AQ5U5X8 452 aa13.55□□□□□ -0.24
TNFRSF8-204ENST00000479933 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.55□□□□□ -0.24
TNFRSF8-204ENST00000479933 COX7A2LO14548 114 aa13.54□□□□□ -0.24
TNFRSF8-204ENST00000479933 TRACP01848 142 aa13.54□□□□□ -0.24
TNFRSF8-204ENST00000479933 ACANP16112 2415 aa13.53□□□□□ -0.24
TNFRSF8-204ENST00000479933 TRAV13-1A0A0B4J241 112 aa13.53□□□□□ -0.24
TNFRSF8-204ENST00000479933 LINC00482Q8N8I6 264 aa13.52□□□□□ -0.24
TNFRSF8-204ENST00000479933 COPS9Q8WXC6 57 aa13.52□□□□□ -0.24
TNFRSF8-204ENST00000479933 SMIM1B2RUZ4 78 aa13.52□□□□□ -0.25
TNFRSF8-204ENST00000479933 ANK3Q12955 4377 aaKnown RBP13.52□□□□□ -0.25
TNFRSF8-204ENST00000479933 INAFM2P0DMQ5 153 aa13.51□□□□□ -0.25
TNFRSF8-204ENST00000479933 DPH3Q96FX2 82 aa13.51□□□□□ -0.25
TNFRSF8-204ENST00000479933 FHL2Q14192 279 aa13.5□□□□□ -0.25
TNFRSF8-204ENST00000479933 Q9H8V8 135 aa13.5□□□□□ -0.25
TNFRSF8-204ENST00000479933 KRTAP10-3P60369 221 aa13.49□□□□□ -0.25
TNFRSF8-204ENST00000479933 RPL18AQ02543 176 aaKnown RBP13.49□□□□□ -0.25
TNFRSF8-204ENST00000479933 KIR2DL5BQ8NHK3 375 aa13.49□□□□□ -0.25
TNFRSF8-204ENST00000479933 SMR3AQ99954 134 aa13.49□□□□□ -0.25
TNFRSF8-204ENST00000479933 KMT2BQ9UMN6 2715 aaPredicted RBP13.49□□□□□ -0.25
TNFRSF8-204ENST00000479933 SETXQ7Z333 2677 aaKnown RBP13.49□□□□□ -0.25
TNFRSF8-204ENST00000479933 hADV29S1A0JD25 119 aa13.49□□□□□ -0.25
TNFRSF8-204ENST00000479933 LOC100131303A0A0U1RQF7 123 aa13.48□□□□□ -0.25
TNFRSF8-204ENST00000479933 F5H768 121 aa13.48□□□□□ -0.25
TNFRSF8-204ENST00000479933 LY6G6DO95868 133 aa13.48□□□□□ -0.25
TNFRSF8-204ENST00000479933 MTORP42345 2549 aa13.47□□□□□ -0.25
TNFRSF8-204ENST00000479933 ITPR2Q14571 2701 aa13.47□□□□□ -0.25
TNFRSF8-204ENST00000479933 UPK3BQ9BT76 320 aa13.47□□□□□ -0.25
TNFRSF8-204ENST00000479933 TRBV6-8A0A0A6YYG3 113 aa13.46□□□□□ -0.25
TNFRSF8-204ENST00000479933 LINC00612Q8N6U2 182 aa13.46□□□□□ -0.25
TNFRSF8-204ENST00000479933 UNC79Q9P2D8 2635 aa13.46□□□□□ -0.25
TNFRSF8-204ENST00000479933 SETD2Q9BYW2 2564 aaPredicted RBP13.46□□□□□ -0.25
TNFRSF8-204ENST00000479933 NPC2P61916 151 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms