RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 UBE2D3P61077 147 aa4.2□□□□□ -1.74
ATPAF1-204ENST00000474020 UBE2D2P62837 147 aa4.2□□□□□ -1.74
ATPAF1-204ENST00000474020 GAGE4Q13068 117 aa4.2□□□□□ -1.74
ATPAF1-204ENST00000474020 GAGE5Q13069 117 aa4.2□□□□□ -1.74
ATPAF1-204ENST00000474020 ZFAND6Q6FIF0 208 aa4.2□□□□□ -1.74
ATPAF1-204ENST00000474020 Q6ZTI0 123 aa4.2□□□□□ -1.74
ATPAF1-204ENST00000474020 Q6ZUT4 128 aa4.2□□□□□ -1.74
ATPAF1-204ENST00000474020 C10orf126Q8N4M7 172 aa4.2□□□□□ -1.74
ATPAF1-204ENST00000474020 VSIG2Q96IQ7 327 aa4.2□□□□□ -1.74
ATPAF1-204ENST00000474020 ATRQ13535 2644 aa4.2□□□□□ -1.74
ATPAF1-204ENST00000474020 NDUFA1O15239 70 aa4.19□□□□□ -1.74
ATPAF1-204ENST00000474020 TSPAN13O95857 204 aa4.19□□□□□ -1.74
ATPAF1-204ENST00000474020 CFC1BP0CG36 223 aa4.19□□□□□ -1.74
ATPAF1-204ENST00000474020 CFC1P0CG37 223 aa4.19□□□□□ -1.74
ATPAF1-204ENST00000474020 APOC4P55056 127 aa4.19□□□□□ -1.74
ATPAF1-204ENST00000474020 TSPEAR-AS2P59090 65 aa4.19□□□□□ -1.74
ATPAF1-204ENST00000474020 RBX1P62877 108 aa4.19□□□□□ -1.74
ATPAF1-204ENST00000474020 HERV-K104P63124 156 aa4.19□□□□□ -1.74
ATPAF1-204ENST00000474020 MIAQ16674 131 aa4.19□□□□□ -1.74
ATPAF1-204ENST00000474020 CEMP1Q6PRD7 247 aaPredicted RBP4.19□□□□□ -1.74
ATPAF1-204ENST00000474020 SFTA2Q6UW10 78 aa4.19□□□□□ -1.74
ATPAF1-204ENST00000474020 ATP6V0E2Q8NHE4 81 aa4.19□□□□□ -1.74
ATPAF1-204ENST00000474020 OVOL2Q9BRP0 275 aa4.19□□□□□ -1.74
ATPAF1-204ENST00000474020 SPANXDQ9BXN6 97 aa4.19□□□□□ -1.74
ATPAF1-204ENST00000474020 SPANXCQ9NY87 97 aa4.19□□□□□ -1.74
ATPAF1-204ENST00000474020 FBN1P35555 2871 aaKnown RBP4.19□□□□□ -1.74
ATPAF1-204ENST00000474020 DCHS2Q6V1P9 2916 aa4.18□□□□□ -1.74
ATPAF1-204ENST00000474020 IGLV5-45A0A087WSX0 123 aa4.18□□□□□ -1.74
ATPAF1-204ENST00000474020 A4D1N5 150 aa4.18□□□□□ -1.74
ATPAF1-204ENST00000474020 G3V4G9 280 aa4.18□□□□□ -1.74
ATPAF1-204ENST00000474020 H3BMG7 143 aa4.18□□□□□ -1.74
ATPAF1-204ENST00000474020 LY6G6DO95868 133 aa4.18□□□□□ -1.74
ATPAF1-204ENST00000474020 PRM2P04554 102 aa4.18□□□□□ -1.74
ATPAF1-204ENST00000474020 SPINK8P0C7L1 97 aa4.18□□□□□ -1.74
ATPAF1-204ENST00000474020 ATXN8Q156A1 80 aa4.18□□□□□ -1.74
ATPAF1-204ENST00000474020 RNASE13Q5GAN3 156 aaKnown RBP4.18□□□□□ -1.74
ATPAF1-204ENST00000474020 MUSTN1Q8IVN3 82 aa4.18□□□□□ -1.74
ATPAF1-204ENST00000474020 RNF183Q96D59 192 aa4.18□□□□□ -1.74
ATPAF1-204ENST00000474020 CHCHD5Q9BSY4 110 aa4.18□□□□□ -1.74
ATPAF1-204ENST00000474020 FN1P02751 2386 aaKnown RBP4.18□□□□□ -1.74
ATPAF1-204ENST00000474020 APCP25054 2843 aa4.17□□□□□ -1.74
ATPAF1-204ENST00000474020 CSMD2Q7Z408 3487 aa4.17□□□□□ -1.74
ATPAF1-204ENST00000474020 TRAV8-3A0A0A6YYJ7 113 aa4.17□□□□□ -1.74
ATPAF1-204ENST00000474020 TRAV13-1A0A0B4J241 112 aa4.17□□□□□ -1.74
ATPAF1-204ENST00000474020 H7C2G1 150 aa4.17□□□□□ -1.74
ATPAF1-204ENST00000474020 PCP4P48539 62 aa4.17□□□□□ -1.74
ATPAF1-204ENST00000474020 MEIG1Q5JSS6 88 aa4.17□□□□□ -1.74
ATPAF1-204ENST00000474020 C10orf25Q5T742 122 aa4.17□□□□□ -1.74
ATPAF1-204ENST00000474020 FAM19A3Q7Z5A8 133 aa4.17□□□□□ -1.74
ATPAF1-204ENST00000474020 KIR2DL5BQ8NHK3 375 aa4.17□□□□□ -1.74
ATPAF1-204ENST00000474020 KRTAP1-5Q9BYS1 174 aa4.17□□□□□ -1.74
ATPAF1-204ENST00000474020 TACC2O95359 2948 aa4.17□□□□□ -1.74
ATPAF1-204ENST00000474020 LYRM9A8MSI8 78 aa4.16□□□□□ -1.74
ATPAF1-204ENST00000474020 CRLF1O75462 422 aa4.16□□□□□ -1.74
ATPAF1-204ENST00000474020 HIST2H2BDQ6DRA6 164 aa4.16□□□□□ -1.74
ATPAF1-204ENST00000474020 CDC42SE2Q9NRR3 84 aa4.16□□□□□ -1.74
ATPAF1-204ENST00000474020 CDKN2A-AS1Q9UH64 79 aa4.16□□□□□ -1.74
ATPAF1-204ENST00000474020 AGRNO00468 2067 aa4.15□□□□□ -1.74
ATPAF1-204ENST00000474020 TRBV6-8A0A0A6YYG3 113 aa4.15□□□□□ -1.75
ATPAF1-204ENST00000474020 IGLV5-39A0A0G2JS06 123 aa4.15□□□□□ -1.75
ATPAF1-204ENST00000474020 TRBV30A0A0K0K1B3 111 aa4.15□□□□□ -1.75
ATPAF1-204ENST00000474020 TEX48A0A1B0GUV7 120 aa4.15□□□□□ -1.75
ATPAF1-204ENST00000474020 M0QXV9 152 aa4.15□□□□□ -1.75
ATPAF1-204ENST00000474020 IGHV3-33P01772 117 aa4.15□□□□□ -1.75
ATPAF1-204ENST00000474020 GIG44P09565 113 aaPredicted RBP4.15□□□□□ -1.75
ATPAF1-204ENST00000474020 DEFB130BP0DP73 79 aa4.15□□□□□ -1.75
ATPAF1-204ENST00000474020 DEFB130AP0DP74 79 aa4.15□□□□□ -1.75
ATPAF1-204ENST00000474020 WFDC2Q14508 124 aa4.15□□□□□ -1.75
ATPAF1-204ENST00000474020 SS18Q15532 418 aa4.15□□□□□ -1.75
ATPAF1-204ENST00000474020 ETDBQ3ZM63 59 aa4.15□□□□□ -1.75
ATPAF1-204ENST00000474020 LINC00242Q5T6M2 205 aa4.15□□□□□ -1.75
ATPAF1-204ENST00000474020 SH2D6Q7Z4S9 175 aa4.15□□□□□ -1.75
ATPAF1-204ENST00000474020 SBSPONQ8IVN8 264 aa4.15□□□□□ -1.75
ATPAF1-204ENST00000474020 CSNK1G2-AS1Q8NCQ2 148 aa4.15□□□□□ -1.75
ATPAF1-204ENST00000474020 PPDPFLQ8WWR9 84 aa4.15□□□□□ -1.75
ATPAF1-204ENST00000474020 WFDC10AQ9H1F0 79 aa4.15□□□□□ -1.75
ATPAF1-204ENST00000474020 PPDPFQ9H3Y8 114 aa4.15□□□□□ -1.75
ATPAF1-204ENST00000474020 Q9H8V8 135 aa4.15□□□□□ -1.75
ATPAF1-204ENST00000474020 PRO0255Q9UI72 69 aa4.15□□□□□ -1.75
ATPAF1-204ENST00000474020 AKAP9Q99996 3911 aa4.15□□□□□ -1.75
ATPAF1-204ENST00000474020 CCDC168Q8NDH2 2452 aa4.15□□□□□ -1.75
ATPAF1-204ENST00000474020 PLAC8L1A1L4L8 177 aa4.14□□□□□ -1.75
ATPAF1-204ENST00000474020 SMIM1B2RUZ4 78 aa4.14□□□□□ -1.75
ATPAF1-204ENST00000474020 INAFM1C9JVW0 142 aa4.14□□□□□ -1.75
ATPAF1-204ENST00000474020 TMEM262E9PQX1 116 aa4.14□□□□□ -1.75
ATPAF1-204ENST00000474020 TCL1BO95988 128 aa4.14□□□□□ -1.75
ATPAF1-204ENST00000474020 RPL13AP40429 203 aaKnown RBP4.14□□□□□ -1.75
ATPAF1-204ENST00000474020 GAGE6Q13070 117 aa4.14□□□□□ -1.75
ATPAF1-204ENST00000474020 NTM-AS1Q6ZSK4 140 aa4.14□□□□□ -1.75
ATPAF1-204ENST00000474020 TEN1Q86WV5 123 aa4.14□□□□□ -1.75
ATPAF1-204ENST00000474020 COX7B2Q8TF08 81 aa4.14□□□□□ -1.75
ATPAF1-204ENST00000474020 FAM104AQ969W3 186 aa4.14□□□□□ -1.75
ATPAF1-204ENST00000474020 SIGMAR1Q99720 223 aa4.14□□□□□ -1.75
ATPAF1-204ENST00000474020 ICOSQ9Y6W8 199 aa4.14□□□□□ -1.75
ATPAF1-204ENST00000474020 STAB1Q9NY15 2570 aa4.13□□□□□ -1.75
ATPAF1-204ENST00000474020 C9JAW5 83 aa4.13□□□□□ -1.75
ATPAF1-204ENST00000474020 SLC25A20O43772 301 aa4.13□□□□□ -1.75
ATPAF1-204ENST00000474020 LINC00694P0DN24 101 aa4.13□□□□□ -1.75
ATPAF1-204ENST00000474020 SCGB1A1P11684 91 aa4.13□□□□□ -1.75
ATPAF1-204ENST00000474020 DAD1P61803 113 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms