RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 Q5VV11 94 aa0.68□□□□□ -2.3
VPS8-220ENST00000469713 PLAC4Q8WY50 150 aa0.68□□□□□ -2.3
VPS8-220ENST00000469713 PMCHL2Q9BQD1 86 aa0.68□□□□□ -2.3
VPS8-220ENST00000469713 BPESC1Q9GZL8 116 aa0.68□□□□□ -2.3
VPS8-220ENST00000469713 NDUFA4L2Q9NRX3 87 aa0.68□□□□□ -2.3
VPS8-220ENST00000469713 TMEM14BQ9NUH8 114 aa0.68□□□□□ -2.3
VPS8-220ENST00000469713 AP4S1Q9Y587 144 aa0.68□□□□□ -2.3
VPS8-220ENST00000469713 MGAM2Q2M2H8 2515 aa0.68□□□□□ -2.3
VPS8-220ENST00000469713 TLN2Q9Y4G6 2542 aa0.68□□□□□ -2.3
VPS8-220ENST00000469713 LRRC37A3O60309 1634 aa0.67□□□□□ -2.3
VPS8-220ENST00000469713 MRC1P22897 1456 aa0.67□□□□□ -2.3
VPS8-220ENST00000469713 TEX14Q8IWB6 1497 aa0.67□□□□□ -2.3
VPS8-220ENST00000469713 SHANK2Q9UPX8 1470 aa0.67□□□□□ -2.3
VPS8-220ENST00000469713 MTORP42345 2549 aa0.67□□□□□ -2.3
VPS8-220ENST00000469713 TRGV1A0A0A0MS02 117 aa0.67□□□□□ -2.3
VPS8-220ENST00000469713 TRAV22A0A0B4J277 110 aa0.67□□□□□ -2.3
VPS8-220ENST00000469713 CRYM-AS1A6NIL9 109 aa0.67□□□□□ -2.3
VPS8-220ENST00000469713 C10orf142B7Z368 130 aa0.67□□□□□ -2.3
VPS8-220ENST00000469713 CHKB-CPT1BH3BT56 60 aa0.67□□□□□ -2.3
VPS8-220ENST00000469713 SPAG11BQ08648 103 aa0.67□□□□□ -2.3
VPS8-220ENST00000469713 KRTAP20-1Q3LI63 56 aa0.67□□□□□ -2.3
VPS8-220ENST00000469713 SPAG11AQ6PDA7 123 aa0.67□□□□□ -2.3
VPS8-220ENST00000469713 MGST2Q99735 147 aa0.67□□□□□ -2.3
VPS8-220ENST00000469713 WFDC6Q9BQY6 131 aa0.67□□□□□ -2.3
VPS8-220ENST00000469713 PRO1933Q9H354 126 aa0.67□□□□□ -2.3
VPS8-220ENST00000469713 Q9H521 79 aa0.67□□□□□ -2.3
VPS8-220ENST00000469713 MANBALQ9NQG1 85 aa0.67□□□□□ -2.3
VPS8-220ENST00000469713 COL4A6Q14031 1691 aa0.67□□□□□ -2.3
VPS8-220ENST00000469713 ZMYM4Q5VZL5 1548 aa0.67□□□□□ -2.3
VPS8-220ENST00000469713 ASPMQ8IZT6 3477 aa0.67□□□□□ -2.3
VPS8-220ENST00000469713 ANKRD36BQ8N2N9 1353 aa0.67□□□□□ -2.3
VPS8-220ENST00000469713 LAMA3Q16787 3333 aa0.67□□□□□ -2.3
VPS8-220ENST00000469713 SPTBN2O15020 2390 aa0.67□□□□□ -2.3
VPS8-220ENST00000469713 ADGRL2O95490 1459 aa0.67□□□□□ -2.3
VPS8-220ENST00000469713 MAGI1Q96QZ7 1491 aaPredicted RBP0.67□□□□□ -2.3
VPS8-220ENST00000469713 IFT172Q9UG01 1749 aa0.67□□□□□ -2.3
VPS8-220ENST00000469713 MARF1Q9Y4F3 1742 aaKnown RBP0.67□□□□□ -2.3
VPS8-220ENST00000469713 HTTP42858 3142 aa0.67□□□□□ -2.3
VPS8-220ENST00000469713 CRYBG3Q68DQ2 2970 aa0.66□□□□□ -2.3
VPS8-220ENST00000469713 ARHGEF5Q12774 1597 aa0.66□□□□□ -2.3
VPS8-220ENST00000469713 LAMC3Q9Y6N6 1575 aa0.66□□□□□ -2.3
VPS8-220ENST00000469713 COL7A1Q02388 2944 aa0.66□□□□□ -2.3
VPS8-220ENST00000469713 CELSR2Q9HCU4 2923 aa0.66□□□□□ -2.3
VPS8-220ENST00000469713 NAP1L6A6NFF2 107 aa0.66□□□□□ -2.3
VPS8-220ENST00000469713 K7EIL1 84 aa0.66□□□□□ -2.3
VPS8-220ENST00000469713 HMGN4O00479 90 aa0.66□□□□□ -2.3
VPS8-220ENST00000469713 LINC00032P0C843 101 aa0.66□□□□□ -2.3
VPS8-220ENST00000469713 IGLC1P0CG04 106 aa0.66□□□□□ -2.3
VPS8-220ENST00000469713 CCL18P55774 89 aa0.66□□□□□ -2.3
VPS8-220ENST00000469713 C10orf99Q6UWK7 81 aa0.66□□□□□ -2.3
VPS8-220ENST00000469713 C9orf62Q8N4C0 152 aa0.66□□□□□ -2.3
VPS8-220ENST00000469713 PPP1R1CQ8WVI7 109 aa0.66□□□□□ -2.3
VPS8-220ENST00000469713 NPVFQ9HCQ7 196 aa0.66□□□□□ -2.3
VPS8-220ENST00000469713 DYNLRB1Q9NP97 96 aa0.66□□□□□ -2.3
VPS8-220ENST00000469713 SCP2D1Q9UJQ7 156 aa0.66□□□□□ -2.3
VPS8-220ENST00000469713 LENEPQ9Y5L5 61 aa0.66□□□□□ -2.3
VPS8-220ENST00000469713 TOP2BQ02880 1626 aa0.66□□□□□ -2.3
VPS8-220ENST00000469713 UTRNP46939 3433 aa0.66□□□□□ -2.3
VPS8-220ENST00000469713 MUC5ACP98088 5654 aa0.66□□□□□ -2.3
VPS8-220ENST00000469713 PTPRZ1P23471 2315 aaPredicted RBP0.66□□□□□ -2.3
VPS8-220ENST00000469713 MON2Q7Z3U7 1717 aa0.66□□□□□ -2.3
VPS8-220ENST00000469713 PLEKHH2Q8IVE3 1493 aa0.66□□□□□ -2.3
VPS8-220ENST00000469713 FYCO1Q9BQS8 1478 aa0.66□□□□□ -2.3
VPS8-220ENST00000469713 BTAF1O14981 1849 aa0.66□□□□□ -2.3
VPS8-220ENST00000469713 SBF2Q86WG5 1849 aa0.66□□□□□ -2.3
VPS8-220ENST00000469713 ABCA4P78363 2273 aa0.66□□□□□ -2.3
VPS8-220ENST00000469713 BAZ1AQ9NRL2 1556 aaPredicted RBP0.66□□□□□ -2.3
VPS8-220ENST00000469713 SCN7AQ01118 1682 aa0.65□□□□□ -2.3
VPS8-220ENST00000469713 BRCA2P51587 3418 aa0.65□□□□□ -2.31
VPS8-220ENST00000469713 ITPR2Q14571 2701 aa0.65□□□□□ -2.31
VPS8-220ENST00000469713 TRAV1-2A0A0B4J238 106 aa0.65□□□□□ -2.31
VPS8-220ENST00000469713 PVALEFA0A1B0GWK0 134 aa0.65□□□□□ -2.31
VPS8-220ENST00000469713 IGLC7A0M8Q6 106 aa0.65□□□□□ -2.31
VPS8-220ENST00000469713 M0R135 149 aa0.65□□□□□ -2.31
VPS8-220ENST00000469713 SFT2D2O95562 160 aa0.65□□□□□ -2.31
VPS8-220ENST00000469713 APOC3P02656 99 aa0.65□□□□□ -2.31
VPS8-220ENST00000469713 ACYP2P14621 99 aa0.65□□□□□ -2.31
VPS8-220ENST00000469713 FAUP35544 74 aaKnown RBP0.65□□□□□ -2.31
VPS8-220ENST00000469713 KRTDAPP60985 99 aa0.65□□□□□ -2.31
VPS8-220ENST00000469713 UBE2D3P61077 147 aa0.65□□□□□ -2.31
VPS8-220ENST00000469713 UBE2D2P62837 147 aa0.65□□□□□ -2.31
VPS8-220ENST00000469713 FAM167A-AS1Q96KT0 104 aa0.65□□□□□ -2.31
VPS8-220ENST00000469713 CDC42SE2Q9NRR3 84 aa0.65□□□□□ -2.31
VPS8-220ENST00000469713 PRO1854Q9UHT4 67 aa0.65□□□□□ -2.31
VPS8-220ENST00000469713 R4GMQ9 66 aa0.65□□□□□ -2.31
VPS8-220ENST00000469713 V9GYH0 126 aa0.65□□□□□ -2.31
VPS8-220ENST00000469713 V9GYS6 101 aa0.65□□□□□ -2.31
VPS8-220ENST00000469713 FRYLO94915 3013 aa0.65□□□□□ -2.31
VPS8-220ENST00000469713 GAPVD1Q14C86 1478 aa0.65□□□□□ -2.31
VPS8-220ENST00000469713 LRBAP50851 2863 aa0.65□□□□□ -2.31
VPS8-220ENST00000469713 USP34Q70CQ2 3546 aa0.65□□□□□ -2.31
VPS8-220ENST00000469713 RGPD4Q7Z3J3 1758 aa0.65□□□□□ -2.31
VPS8-220ENST00000469713 IGF2RP11717 2491 aa0.64□□□□□ -2.31
VPS8-220ENST00000469713 PRDM15P57071 1507 aaPredicted RBP0.64□□□□□ -2.31
VPS8-220ENST00000469713 RNF213Q63HN8 5207 aa0.64□□□□□ -2.31
VPS8-220ENST00000469713 A0A096LNT2 108 aa0.64□□□□□ -2.31
VPS8-220ENST00000469713 A0A0G2JND7 137 aa0.64□□□□□ -2.31
VPS8-220ENST00000469713 CTXND1A0A1B0GTU2 59 aa0.64□□□□□ -2.31
VPS8-220ENST00000469713 ZNF137PP52743 207 aa0.64□□□□□ -2.31
VPS8-220ENST00000469713 BAGE3Q86Y29 109 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms