RNA–Protein interactions for RNA: ENST00000448497.1

RFC4-209, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-209ENST00000448497 A6NDN8 102 aa4.79□□□□□ -1.64
RFC4-209ENST00000448497 DEFB4AO15263 64 aa4.79□□□□□ -1.64
RFC4-209ENST00000448497 IGHV3-30-3P0DP02 117 aa4.79□□□□□ -1.64
RFC4-209ENST00000448497 LGALS3P17931 250 aaKnown RBP4.79□□□□□ -1.64
RFC4-209ENST00000448497 TCTAP57738 103 aa4.79□□□□□ -1.64
RFC4-209ENST00000448497 TSPEAR-AS2P59090 65 aa4.79□□□□□ -1.64
RFC4-209ENST00000448497 BATFQ16520 125 aa4.79□□□□□ -1.64
RFC4-209ENST00000448497 C12orf74Q32Q52 190 aa4.79□□□□□ -1.64
RFC4-209ENST00000448497 LINC00242Q5T6M2 205 aa4.79□□□□□ -1.64
RFC4-209ENST00000448497 TM2D3Q9BRN9 247 aa4.79□□□□□ -1.64
RFC4-209ENST00000448497 NOTCH1P46531 2555 aa4.78□□□□□ -1.64
RFC4-209ENST00000448497 A0A0J9YY99 117 aa4.78□□□□□ -1.64
RFC4-209ENST00000448497 A0A1B0GV90 55 aa4.78□□□□□ -1.64
RFC4-209ENST00000448497 B5MCH6 92 aa4.78□□□□□ -1.64
RFC4-209ENST00000448497 F5H768 121 aa4.78□□□□□ -1.64
RFC4-209ENST00000448497 RNASE13Q5GAN3 156 aaKnown RBP4.78□□□□□ -1.64
RFC4-209ENST00000448497 ZFAND6Q6FIF0 208 aa4.78□□□□□ -1.64
RFC4-209ENST00000448497 CEND1Q8N111 149 aa4.78□□□□□ -1.64
RFC4-209ENST00000448497 LINC01561Q8N1V8 128 aa4.78□□□□□ -1.64
RFC4-209ENST00000448497 LINC00469Q8N7U9 141 aa4.78□□□□□ -1.64
RFC4-209ENST00000448497 WWC2-AS2Q96NR7 200 aa4.78□□□□□ -1.64
RFC4-209ENST00000448497 CHCHD5Q9BSY4 110 aa4.78□□□□□ -1.64
RFC4-209ENST00000448497 CDKN2A-AS1Q9UH64 79 aa4.78□□□□□ -1.64
RFC4-209ENST00000448497 ICOSQ9Y6W8 199 aa4.78□□□□□ -1.64
RFC4-209ENST00000448497 IGLV4-60A0A075B6I1 120 aa4.77□□□□□ -1.65
RFC4-209ENST00000448497 A0A096LPF7 62 aa4.77□□□□□ -1.65
RFC4-209ENST00000448497 A0A1B0GWB2 263 aa4.77□□□□□ -1.65
RFC4-209ENST00000448497 K7EIL1 84 aa4.77□□□□□ -1.65
RFC4-209ENST00000448497 TIMM17BO60830 172 aa4.77□□□□□ -1.65
RFC4-209ENST00000448497 GAGE6Q13070 117 aa4.77□□□□□ -1.65
RFC4-209ENST00000448497 LELP1Q5T871 98 aa4.77□□□□□ -1.65
RFC4-209ENST00000448497 HIST1H4GQ99525 98 aa4.77□□□□□ -1.65
RFC4-209ENST00000448497 COX11Q9Y6N1 276 aa4.77□□□□□ -1.65
RFC4-209ENST00000448497 TENM3Q9P273 2699 aa4.76□□□□□ -1.65
RFC4-209ENST00000448497 IGHV3OR16-9A0A0B4J2B5 98 aa4.76□□□□□ -1.65
RFC4-209ENST00000448497 SMIM1B2RUZ4 78 aa4.76□□□□□ -1.65
RFC4-209ENST00000448497 TAX1BP3O14907 124 aa4.76□□□□□ -1.65
RFC4-209ENST00000448497 NDUFA1O15239 70 aa4.76□□□□□ -1.65
RFC4-209ENST00000448497 RBX1P62877 108 aa4.76□□□□□ -1.65
RFC4-209ENST00000448497 COX6A2Q02221 97 aa4.76□□□□□ -1.65
RFC4-209ENST00000448497 LCE4AQ5TA78 99 aa4.76□□□□□ -1.65
RFC4-209ENST00000448497 SCGB1D4Q6XE38 83 aa4.76□□□□□ -1.65
RFC4-209ENST00000448497 Q6ZVH6 145 aa4.76□□□□□ -1.65
RFC4-209ENST00000448497 KRTAP3-1Q9BYR8 98 aa4.76□□□□□ -1.65
RFC4-209ENST00000448497 PPDPFQ9H3Y8 114 aa4.76□□□□□ -1.65
RFC4-209ENST00000448497 RETNQ9HD89 108 aa4.76□□□□□ -1.65
RFC4-209ENST00000448497 MGAM2Q2M2H8 2515 aa4.75□□□□□ -1.65
RFC4-209ENST00000448497 A0A087WZ39 114 aa4.75□□□□□ -1.65
RFC4-209ENST00000448497 TRAV8-3A0A0A6YYJ7 113 aa4.75□□□□□ -1.65
RFC4-209ENST00000448497 TRAV13-1A0A0B4J241 112 aa4.75□□□□□ -1.65
RFC4-209ENST00000448497 A0A0J9YXY3 114 aa4.75□□□□□ -1.65
RFC4-209ENST00000448497 LINC00959A0A1B0GUT2 108 aa4.75□□□□□ -1.65
RFC4-209ENST00000448497 TMEM238C9JI98 176 aa4.75□□□□□ -1.65
RFC4-209ENST00000448497 GCSHP23434 173 aa4.75□□□□□ -1.65
RFC4-209ENST00000448497 FXYD2P54710 66 aa4.75□□□□□ -1.65
RFC4-209ENST00000448497 C10orf126Q8N4M7 172 aa4.75□□□□□ -1.65
RFC4-209ENST00000448497 NDUFA12Q9UI09 145 aa4.75□□□□□ -1.65
RFC4-209ENST00000448497 A0A0J9YWU9 116 aa4.74□□□□□ -1.65
RFC4-209ENST00000448497 KRTAP23-1A1A580 65 aa4.74□□□□□ -1.65
RFC4-209ENST00000448497 IGHV3-30P01768 117 aa4.74□□□□□ -1.65
RFC4-209ENST00000448497 SPINK8P0C7L1 97 aa4.74□□□□□ -1.65
RFC4-209ENST00000448497 SMIM13P0DJ93 91 aa4.74□□□□□ -1.65
RFC4-209ENST00000448497 IGHV3-30-5P0DP03 117 aa4.74□□□□□ -1.65
RFC4-209ENST00000448497 PTTG1IPP53801 180 aa4.74□□□□□ -1.65
RFC4-209ENST00000448497 HERV-K104P63124 156 aa4.74□□□□□ -1.65
RFC4-209ENST00000448497 SRSF9Q13242 221 aaKnown RBP eCLIP4.74□□□□□ -1.65
RFC4-209ENST00000448497 SFTA2Q6UW10 78 aa4.74□□□□□ -1.65
RFC4-209ENST00000448497 Q6ZTC4 211 aa4.74□□□□□ -1.65
RFC4-209ENST00000448497 C11orf45Q8TAV5 145 aa4.74□□□□□ -1.65
RFC4-209ENST00000448497 ZNF625Q96I27 306 aaPredicted RBP4.74□□□□□ -1.65
RFC4-209ENST00000448497 LITAFQ99732 161 aa4.74□□□□□ -1.65
RFC4-209ENST00000448497 SPANXDQ9BXN6 97 aa4.74□□□□□ -1.65
RFC4-209ENST00000448497 SPANXCQ9NY87 97 aa4.74□□□□□ -1.65
RFC4-209ENST00000448497 IFITM1P13164 125 aa4.73□□□□□ -1.65
RFC4-209ENST00000448497 HTN3P15516 51 aa4.73□□□□□ -1.65
RFC4-209ENST00000448497 SS18Q15532 418 aa4.73□□□□□ -1.65
RFC4-209ENST00000448497 LYPD5Q6UWN5 251 aa4.73□□□□□ -1.65
RFC4-209ENST00000448497 PRR34Q9NV39 138 aa4.73□□□□□ -1.65
RFC4-209ENST00000448497 FAM30AQ9NZY2 134 aa4.73□□□□□ -1.65
RFC4-209ENST00000448497 IGHV3-64A0A075B6Q5 118 aa4.72□□□□□ -1.65
RFC4-209ENST00000448497 TRAV10A0A0B4J240 114 aa4.72□□□□□ -1.65
RFC4-209ENST00000448497 KRTAP9-7A8MTY7 169 aa4.72□□□□□ -1.65
RFC4-209ENST00000448497 TMEM262E9PQX1 116 aa4.72□□□□□ -1.65
RFC4-209ENST00000448497 K7EP13 123 aa4.72□□□□□ -1.65
RFC4-209ENST00000448497 RPL24P83731 157 aaKnown RBP4.72□□□□□ -1.65
RFC4-209ENST00000448497 CD164L2Q6UWJ8 174 aa4.72□□□□□ -1.65
RFC4-209ENST00000448497 C15orf53Q8NAA6 179 aa4.72□□□□□ -1.65
RFC4-209ENST00000448497 DEFB131BA0A096LNP1 70 aa4.71□□□□□ -1.66
RFC4-209ENST00000448497 TRAV8-4A0A0B4J246 113 aa4.71□□□□□ -1.66
RFC4-209ENST00000448497 REG3AQ06141 175 aa4.71□□□□□ -1.66
RFC4-209ENST00000448497 CIRBPQ14011 172 aaKnown RBP4.71□□□□□ -1.66
RFC4-209ENST00000448497 MIAQ16674 131 aa4.71□□□□□ -1.66
RFC4-209ENST00000448497 COX7B2Q8TF08 81 aa4.71□□□□□ -1.66
RFC4-209ENST00000448497 COPS9Q8WXC6 57 aa4.71□□□□□ -1.66
RFC4-209ENST00000448497 NHP2Q9NX24 153 aaKnown RBP4.71□□□□□ -1.66
RFC4-209ENST00000448497 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.7□□□□□ -1.66
RFC4-209ENST00000448497 A0A0B4J2C4 111 aa4.7□□□□□ -1.66
RFC4-209ENST00000448497 ANGP03950 147 aaKnown RBP4.7□□□□□ -1.66
RFC4-209ENST00000448497 NANOS2P60321 138 aaKnown RBP4.7□□□□□ -1.66
RFC4-209ENST00000448497 UBE2V1Q13404 147 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms