RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 TEN1Q86WV5 123 aa12.58□□□□□ -0.39
CLDN9-201ENST00000445369 TRIAP1O43715 76 aa12.57□□□□□ -0.4
CLDN9-201ENST00000445369 DAND5Q8N907 189 aa12.57□□□□□ -0.4
CLDN9-201ENST00000445369 M0QXV9 152 aa12.56□□□□□ -0.4
CLDN9-201ENST00000445369 CIRBPQ14011 172 aaKnown RBP12.56□□□□□ -0.4
CLDN9-201ENST00000445369 HIVEP2P31629 2446 aa12.55□□□□□ -0.4
CLDN9-201ENST00000445369 PPDPFLQ8WWR9 84 aa12.55□□□□□ -0.4
CLDN9-201ENST00000445369 ZNF625Q96I27 306 aaPredicted RBP12.55□□□□□ -0.4
CLDN9-201ENST00000445369 CARD19Q96LW7 228 aa12.55□□□□□ -0.4
CLDN9-201ENST00000445369 ICOSQ9Y6W8 199 aa12.55□□□□□ -0.4
CLDN9-201ENST00000445369 NIPBLQ6KC79 2804 aaeCLIP12.55□□□□□ -0.4
CLDN9-201ENST00000445369 SLC25A20O43772 301 aa12.55□□□□□ -0.4
CLDN9-201ENST00000445369 ATXN8Q156A1 80 aa12.55□□□□□ -0.4
CLDN9-201ENST00000445369 LINC00612Q8N6U2 182 aa12.55□□□□□ -0.4
CLDN9-201ENST00000445369 KIR2DL5BQ8NHK3 375 aa12.55□□□□□ -0.4
CLDN9-201ENST00000445369 C9JAW5 83 aa12.54□□□□□ -0.4
CLDN9-201ENST00000445369 TRBV6-8A0A0A6YYG3 113 aa12.53□□□□□ -0.4
CLDN9-201ENST00000445369 CRLF1O75462 422 aa12.53□□□□□ -0.4
CLDN9-201ENST00000445369 ANKRD29Q8N6D5 301 aa12.53□□□□□ -0.4
CLDN9-201ENST00000445369 LINC00308Q8TCZ7 52 aa12.53□□□□□ -0.4
CLDN9-201ENST00000445369 SIGMAR1Q99720 223 aa12.53□□□□□ -0.4
CLDN9-201ENST00000445369 GAGE6Q13070 117 aa12.52□□□□□ -0.4
CLDN9-201ENST00000445369 LINC01620Q4KN68 170 aa12.52□□□□□ -0.4
CLDN9-201ENST00000445369 FLNBO75369 2602 aaKnown RBP12.52□□□□□ -0.41
CLDN9-201ENST00000445369 PRIMA1Q86XR5 153 aa12.52□□□□□ -0.41
CLDN9-201ENST00000445369 RPL13AP40429 203 aaKnown RBP12.51□□□□□ -0.41
CLDN9-201ENST00000445369 INAFM1C9JVW0 142 aa12.5□□□□□ -0.41
CLDN9-201ENST00000445369 DEFB130BP0DP73 79 aa12.5□□□□□ -0.41
CLDN9-201ENST00000445369 DEFB130AP0DP74 79 aa12.5□□□□□ -0.41
CLDN9-201ENST00000445369 HERV-K104P63124 156 aa12.5□□□□□ -0.41
CLDN9-201ENST00000445369 LINC01600Q96MT4 127 aa12.5□□□□□ -0.41
CLDN9-201ENST00000445369 X6R8D5 127 aa12.5□□□□□ -0.41
CLDN9-201ENST00000445369 IGLV4-60A0A075B6I1 120 aa12.5□□□□□ -0.41
CLDN9-201ENST00000445369 C2CD3Q4AC94 2353 aa12.49□□□□□ -0.41
CLDN9-201ENST00000445369 SOSTDC1Q6X4U4 206 aa12.49□□□□□ -0.41
CLDN9-201ENST00000445369 SPATA3Q8NHX4 192 aa12.49□□□□□ -0.41
CLDN9-201ENST00000445369 A0A0U1RRA0 63 aa12.49□□□□□ -0.41
CLDN9-201ENST00000445369 MEIG1Q5JSS6 88 aa12.49□□□□□ -0.41
CLDN9-201ENST00000445369 COX6CP09669 75 aa12.48□□□□□ -0.41
CLDN9-201ENST00000445369 COPS9Q8WXC6 57 aa12.48□□□□□ -0.41
CLDN9-201ENST00000445369 CHCHD5Q9BSY4 110 aa12.48□□□□□ -0.41
CLDN9-201ENST00000445369 CDIP1Q9H305 208 aa12.47□□□□□ -0.41
CLDN9-201ENST00000445369 OTOGQ6ZRI0 2925 aa12.47□□□□□ -0.41
CLDN9-201ENST00000445369 TRBV10-2A0A0K0K1G8 114 aa12.47□□□□□ -0.41
CLDN9-201ENST00000445369 SMIM9A6NGZ8 99 aa12.47□□□□□ -0.41
CLDN9-201ENST00000445369 C9orf66Q5T8R8 295 aa12.47□□□□□ -0.41
CLDN9-201ENST00000445369 PPDPFQ9H3Y8 114 aa12.46□□□□□ -0.41
CLDN9-201ENST00000445369 SCGB1A1P11684 91 aa12.46□□□□□ -0.42
CLDN9-201ENST00000445369 COX7B2Q8TF08 81 aa12.46□□□□□ -0.42
CLDN9-201ENST00000445369 IGKV3OR2-268A0A0C4DH90 116 aa12.45□□□□□ -0.42
CLDN9-201ENST00000445369 NOTCH2Q04721 2471 aa12.45□□□□□ -0.42
CLDN9-201ENST00000445369 IGHV3OR16-9A0A0B4J2B5 98 aa12.44□□□□□ -0.42
CLDN9-201ENST00000445369 GYPEP15421 78 aa12.44□□□□□ -0.42
CLDN9-201ENST00000445369 CLEC2BQ92478 149 aa12.44□□□□□ -0.42
CLDN9-201ENST00000445369 LST1O00453 97 aa12.44□□□□□ -0.42
CLDN9-201ENST00000445369 NTN5Q8WTR8 489 aaPredicted RBP12.42□□□□□ -0.42
CLDN9-201ENST00000445369 PRO0255Q9UI72 69 aa12.42□□□□□ -0.42
CLDN9-201ENST00000445369 A0A087WZ39 114 aa12.41□□□□□ -0.42
CLDN9-201ENST00000445369 FAM222AQ5U5X8 452 aa12.41□□□□□ -0.42
CLDN9-201ENST00000445369 LYRM9A8MSI8 78 aa12.4□□□□□ -0.42
CLDN9-201ENST00000445369 H3BT86 120 aa12.4□□□□□ -0.42
CLDN9-201ENST00000445369 SHISA2Q6UWI4 295 aa12.4□□□□□ -0.42
CLDN9-201ENST00000445369 TOMM7Q9P0U1 55 aa12.4□□□□□ -0.42
CLDN9-201ENST00000445369 LINC00959A0A1B0GUT2 108 aa12.39□□□□□ -0.43
CLDN9-201ENST00000445369 C2orf82Q6UX34 121 aa12.39□□□□□ -0.43
CLDN9-201ENST00000445369 FN1P02751 2386 aaKnown RBP12.38□□□□□ -0.43
CLDN9-201ENST00000445369 A0A1B0GUV1 79 aa12.38□□□□□ -0.43
CLDN9-201ENST00000445369 DEFB135Q30KP9 77 aa12.38□□□□□ -0.43
CLDN9-201ENST00000445369 COX7A2LO14548 114 aa12.37□□□□□ -0.43
CLDN9-201ENST00000445369 C5orf38Q86SI9 138 aa12.37□□□□□ -0.43
CLDN9-201ENST00000445369 MIR7-3HGQ8N6C7 128 aa12.37□□□□□ -0.43
CLDN9-201ENST00000445369 TEX49A0A1B0GTD5 131 aa12.36□□□□□ -0.43
CLDN9-201ENST00000445369 TMEM262E9PQX1 116 aa12.36□□□□□ -0.43
CLDN9-201ENST00000445369 XGP55808 180 aa12.36□□□□□ -0.43
CLDN9-201ENST00000445369 UBE2WQ96B02 151 aa12.36□□□□□ -0.43
CLDN9-201ENST00000445369 CITED1Q99966 193 aa12.36□□□□□ -0.43
CLDN9-201ENST00000445369 PAX4O43316 350 aa12.36□□□□□ -0.43
CLDN9-201ENST00000445369 APOC4P55056 127 aa12.36□□□□□ -0.43
CLDN9-201ENST00000445369 MT-ATP8P03928 68 aa12.34□□□□□ -0.43
CLDN9-201ENST00000445369 A0A096LPF7 62 aa12.34□□□□□ -0.43
CLDN9-201ENST00000445369 IGHV4-28A0A0C4DH34 117 aa12.34□□□□□ -0.43
CLDN9-201ENST00000445369 IBA57-AS1B1ANH7 110 aa12.33□□□□□ -0.44
CLDN9-201ENST00000445369 DEFB4AO15263 64 aa12.33□□□□□ -0.44
CLDN9-201ENST00000445369 SS18Q15532 418 aa12.33□□□□□ -0.44
CLDN9-201ENST00000445369 NSD1Q96L73 2696 aaPredicted RBP12.32□□□□□ -0.44
CLDN9-201ENST00000445369 TRAV13-2A0A0B4J235 113 aa12.32□□□□□ -0.44
CLDN9-201ENST00000445369 LINC00158P58513 81 aa12.32□□□□□ -0.44
CLDN9-201ENST00000445369 IGKV2-28A0A075B6P5 120 aa12.31□□□□□ -0.44
CLDN9-201ENST00000445369 IGKV2D-28P01615 120 aa12.31□□□□□ -0.44
CLDN9-201ENST00000445369 XCL1P47992 114 aa12.31□□□□□ -0.44
CLDN9-201ENST00000445369 SND1-IT1Q9HBX3 110 aa12.31□□□□□ -0.44
CLDN9-201ENST00000445369 HIVEP1P15822 2718 aa12.31□□□□□ -0.44
CLDN9-201ENST00000445369 LINC00337Q8N6G1 96 aa12.31□□□□□ -0.44
CLDN9-201ENST00000445369 Q8NAQ8 132 aa12.31□□□□□ -0.44
CLDN9-201ENST00000445369 VWFP04275 2813 aa12.3□□□□□ -0.44
CLDN9-201ENST00000445369 CRPP02741 224 aa12.3□□□□□ -0.44
CLDN9-201ENST00000445369 CLPSL2Q6UWE3 100 aa12.3□□□□□ -0.44
CLDN9-201ENST00000445369 CCL18P55774 89 aa12.3□□□□□ -0.44
CLDN9-201ENST00000445369 DAD1P61803 113 aa12.3□□□□□ -0.44
CLDN9-201ENST00000445369 LINC01561Q8N1V8 128 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms