RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.26■□□□□ 0.19
CTDSPL-206ENST00000443503 SLPIP03973 132 aa16.26■□□□□ 0.19
CTDSPL-206ENST00000443503 LAMA2P24043 3122 aaKnown RBP16.26■□□□□ 0.19
CTDSPL-206ENST00000443503 IGKV2-24A0A0C4DH68 120 aa16.25■□□□□ 0.19
CTDSPL-206ENST00000443503 TIMM17BO60830 172 aa16.25■□□□□ 0.19
CTDSPL-206ENST00000443503 C1orf158Q8N1D5 194 aa16.25■□□□□ 0.19
CTDSPL-206ENST00000443503 CDC42SE2Q9NRR3 84 aa16.25■□□□□ 0.19
CTDSPL-206ENST00000443503 CENPEQ02224 2701 aa16.24■□□□□ 0.19
CTDSPL-206ENST00000443503 PCSK5Q92824 1860 aa16.24■□□□□ 0.19
CTDSPL-206ENST00000443503 LINC00959A0A1B0GUT2 108 aa16.24■□□□□ 0.19
CTDSPL-206ENST00000443503 MT-ATP8P03928 68 aa16.24■□□□□ 0.19
CTDSPL-206ENST00000443503 SHISA2Q6UWI4 295 aa16.24■□□□□ 0.19
CTDSPL-206ENST00000443503 IGLV2-18A0A075B6J9 118 aa16.24■□□□□ 0.19
CTDSPL-206ENST00000443503 IGLV1-51P01701 117 aa16.24■□□□□ 0.19
CTDSPL-206ENST00000443503 A0A0C4DFX4 3053 aa16.23■□□□□ 0.19
CTDSPL-206ENST00000443503 LINC00242Q5T6M2 205 aa16.23■□□□□ 0.19
CTDSPL-206ENST00000443503 HECTD1Q9ULT8 2610 aa16.23■□□□□ 0.19
CTDSPL-206ENST00000443503 LINC00643Q86TS7 51 aa16.22■□□□□ 0.19
CTDSPL-206ENST00000443503 KIR2DL5BQ8NHK3 375 aa16.22■□□□□ 0.19
CTDSPL-206ENST00000443503 IGLV4-69A0A075B6H9 119 aa16.22■□□□□ 0.19
CTDSPL-206ENST00000443503 CD164L2Q6UWJ8 174 aa16.22■□□□□ 0.19
CTDSPL-206ENST00000443503 H3BQ85 93 aa16.22■□□□□ 0.19
CTDSPL-206ENST00000443503 ATOX1O00244 68 aa16.22■□□□□ 0.19
CTDSPL-206ENST00000443503 SS18L2Q9UHA2 77 aa16.21■□□□□ 0.19
CTDSPL-206ENST00000443503 PTPRBP23467 1997 aa16.21■□□□□ 0.19
CTDSPL-206ENST00000443503 C6orf99Q4VX62 202 aa16.21■□□□□ 0.19
CTDSPL-206ENST00000443503 OXLD1Q5BKU9 147 aa16.21■□□□□ 0.19
CTDSPL-206ENST00000443503 KPRPQ5T749 579 aaPredicted RBP16.19■□□□□ 0.18
CTDSPL-206ENST00000443503 PKIGQ9Y2B9 76 aa16.19■□□□□ 0.18
CTDSPL-206ENST00000443503 TSPEAR-AS2P59090 65 aa16.18■□□□□ 0.18
CTDSPL-206ENST00000443503 UBE2AP49459 152 aa16.18■□□□□ 0.18
CTDSPL-206ENST00000443503 F8P00451 2351 aa16.17■□□□□ 0.18
CTDSPL-206ENST00000443503 CLUHP3Q96NS8 147 aa16.17■□□□□ 0.18
CTDSPL-206ENST00000443503 SPATA25Q9BR10 227 aa16.17■□□□□ 0.18
CTDSPL-206ENST00000443503 KLK5Q9Y337 293 aaPredicted RBP16.17■□□□□ 0.18
CTDSPL-206ENST00000443503 CHCHD7Q9BUK0 85 aa16.17■□□□□ 0.18
CTDSPL-206ENST00000443503 LINC00694P0DN24 101 aa16.16■□□□□ 0.18
CTDSPL-206ENST00000443503 USP24Q9UPU5 2620 aa16.16■□□□□ 0.18
CTDSPL-206ENST00000443503 LELP1Q5T871 98 aa16.15■□□□□ 0.18
CTDSPL-206ENST00000443503 TRANK1O15050 2925 aa16.15■□□□□ 0.18
CTDSPL-206ENST00000443503 IGHV4-30-4P0DP06 118 aa16.15■□□□□ 0.18
CTDSPL-206ENST00000443503 Q6ZSN1 163 aa16.14■□□□□ 0.17
CTDSPL-206ENST00000443503 LST1O00453 97 aa16.14■□□□□ 0.17
CTDSPL-206ENST00000443503 MUC4Q99102 2169 aa16.14■□□□□ 0.17
CTDSPL-206ENST00000443503 PDE6GP18545 87 aa16.14■□□□□ 0.17
CTDSPL-206ENST00000443503 HIGD2AQ9BW72 106 aa16.14■□□□□ 0.17
CTDSPL-206ENST00000443503 PRUNE2Q8WUY3 3088 aa16.13■□□□□ 0.17
CTDSPL-206ENST00000443503 SYCNQ0VAF6 134 aa16.13■□□□□ 0.17
CTDSPL-206ENST00000443503 SMIM1B2RUZ4 78 aa16.12■□□□□ 0.17
CTDSPL-206ENST00000443503 PRB2P02812 416 aaPredicted RBP16.11■□□□□ 0.17
CTDSPL-206ENST00000443503 KIF25-AS1Q9Y6Z4 181 aa16.11■□□□□ 0.17
CTDSPL-206ENST00000443503 IGLV4-60A0A075B6I1 120 aa16.1■□□□□ 0.17
CTDSPL-206ENST00000443503 CFAP54Q96N23 3096 aa16.1■□□□□ 0.17
CTDSPL-206ENST00000443503 NDUFS5O43920 106 aa16.09■□□□□ 0.17
CTDSPL-206ENST00000443503 COX6A2Q02221 97 aa16.09■□□□□ 0.17
CTDSPL-206ENST00000443503 BEAN1Q3B7T3 259 aa16.09■□□□□ 0.17
CTDSPL-206ENST00000443503 SMIM11BQ8TCY0 68 aa16.09■□□□□ 0.17
CTDSPL-206ENST00000443503 AMELXQ99217 191 aa16.09■□□□□ 0.17
CTDSPL-206ENST00000443503 BPTFQ12830 3046 aa16.08■□□□□ 0.17
CTDSPL-206ENST00000443503 SDIM1Q6ZPB5 146 aa16.08■□□□□ 0.16
CTDSPL-206ENST00000443503 TRAV10A0A0B4J240 114 aa16.07■□□□□ 0.16
CTDSPL-206ENST00000443503 RNF183Q96D59 192 aa16.07■□□□□ 0.16
CTDSPL-206ENST00000443503 SMIM20Q8N5G0 67 aa16.06■□□□□ 0.16
CTDSPL-206ENST00000443503 TRAV23DV6A0A075B6W5 121 aa16.06■□□□□ 0.16
CTDSPL-206ENST00000443503 FHL2Q14192 279 aa16.06■□□□□ 0.16
CTDSPL-206ENST00000443503 NDUFV3P56181 108 aaKnown RBP16.05■□□□□ 0.16
CTDSPL-206ENST00000443503 Q8IZM0 81 aa16.05■□□□□ 0.16
CTDSPL-206ENST00000443503 Q6ZQY7 126 aa16.04■□□□□ 0.16
CTDSPL-206ENST00000443503 UNC80Q8N2C7 3258 aa16.04■□□□□ 0.16
CTDSPL-206ENST00000443503 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.04■□□□□ 0.16
CTDSPL-206ENST00000443503 ADAMTSL4-AS1Q5T5F5 129 aa16.04■□□□□ 0.16
CTDSPL-206ENST00000443503 C16orf95Q9H693 158 aa16.04■□□□□ 0.16
CTDSPL-206ENST00000443503 C14orf177Q52M58 125 aa16.03■□□□□ 0.16
CTDSPL-206ENST00000443503 NANOS2P60321 138 aaKnown RBP16.03■□□□□ 0.16
CTDSPL-206ENST00000443503 CYSRT1A8MQ03 144 aa16.02■□□□□ 0.16
CTDSPL-206ENST00000443503 FAM19A5Q7Z5A7 132 aaPredicted RBP16.02■□□□□ 0.16
CTDSPL-206ENST00000443503 IGKV2-28A0A075B6P5 120 aa16.02■□□□□ 0.15
CTDSPL-206ENST00000443503 NDUFB1O75438 58 aa16.02■□□□□ 0.15
CTDSPL-206ENST00000443503 IGKV2D-28P01615 120 aa16.02■□□□□ 0.15
CTDSPL-206ENST00000443503 A0A096LNI7 61 aa16.01■□□□□ 0.15
CTDSPL-206ENST00000443503 RETNQ9HD89 108 aa16.01■□□□□ 0.15
CTDSPL-206ENST00000443503 UNQ6190/PRO20217Q6UXQ8 127 aa16.01■□□□□ 0.15
CTDSPL-206ENST00000443503 CSDC2Q9Y534 153 aaKnown RBP16.01■□□□□ 0.15
CTDSPL-206ENST00000443503 A0A087WZ39 114 aa16■□□□□ 0.15
CTDSPL-206ENST00000443503 LINC00315P59091 139 aa16■□□□□ 0.15
CTDSPL-206ENST00000443503 UPK3BQ9BT76 320 aa16■□□□□ 0.15
CTDSPL-206ENST00000443503 A0A0J9YWU9 116 aa15.99■□□□□ 0.15
CTDSPL-206ENST00000443503 BPY2O14599 106 aa15.99■□□□□ 0.15
CTDSPL-206ENST00000443503 SCXQ7RTU7 201 aa15.99■□□□□ 0.15
CTDSPL-206ENST00000443503 C9orf116Q5BN46 136 aaPredicted RBP15.98■□□□□ 0.15
CTDSPL-206ENST00000443503 FAM19A1Q7Z5A9 133 aa15.98■□□□□ 0.15
CTDSPL-206ENST00000443503 MGAM2Q2M2H8 2515 aa15.97■□□□□ 0.15
CTDSPL-206ENST00000443503 COL27A1Q8IZC6 1860 aaPredicted RBP15.97■□□□□ 0.15
CTDSPL-206ENST00000443503 XGP55808 180 aa15.97■□□□□ 0.15
CTDSPL-206ENST00000443503 Q8N2B8 174 aa15.95■□□□□ 0.14
CTDSPL-206ENST00000443503 IL17DQ8TAD2 202 aa15.95■□□□□ 0.14
CTDSPL-206ENST00000443503 C11orf72Q8NBR9 251 aa15.95■□□□□ 0.14
CTDSPL-206ENST00000443503 FAM19A4Q96LR4 140 aa15.95■□□□□ 0.14
CTDSPL-206ENST00000443503 COX17Q14061 63 aa15.94■□□□□ 0.14
CTDSPL-206ENST00000443503 ENHOQ6UWT2 76 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms