RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 TINCRA0A1B0GVN0 87 aa2.37□□□□□ -2.03
HMGB3P11-201ENST00000440127 IGKV2-29A2NJV5 120 aaPredicted RBP2.37□□□□□ -2.03
HMGB3P11-201ENST00000440127 K7ERU9 68 aa2.37□□□□□ -2.03
HMGB3P11-201ENST00000440127 IGHV3-30P01768 117 aa2.37□□□□□ -2.03
HMGB3P11-201ENST00000440127 GIG44P09565 113 aaPredicted RBP2.37□□□□□ -2.03
HMGB3P11-201ENST00000440127 IGHV3-30-5P0DP03 117 aa2.37□□□□□ -2.03
HMGB3P11-201ENST00000440127 TSPEAR-AS2P59090 65 aa2.37□□□□□ -2.03
HMGB3P11-201ENST00000440127 SMAGPQ0VAQ4 97 aa2.37□□□□□ -2.03
HMGB3P11-201ENST00000440127 DAZ2Q13117 558 aaKnown RBP2.37□□□□□ -2.03
HMGB3P11-201ENST00000440127 RRN3P1Q2M238 152 aa2.37□□□□□ -2.03
HMGB3P11-201ENST00000440127 OCIAD2Q56VL3 154 aa2.37□□□□□ -2.03
HMGB3P11-201ENST00000440127 CEMP1Q6PRD7 247 aaPredicted RBP2.37□□□□□ -2.03
HMGB3P11-201ENST00000440127 Q6ZTI0 123 aa2.37□□□□□ -2.03
HMGB3P11-201ENST00000440127 DAZ4Q86SG3 579 aaKnown RBP2.37□□□□□ -2.03
HMGB3P11-201ENST00000440127 NDUFA11Q86Y39 141 aa2.37□□□□□ -2.03
HMGB3P11-201ENST00000440127 MTURNQ8N3F0 131 aa2.37□□□□□ -2.03
HMGB3P11-201ENST00000440127 FAM104AQ969W3 186 aa2.37□□□□□ -2.03
HMGB3P11-201ENST00000440127 C16orf74Q96GX8 76 aa2.37□□□□□ -2.03
HMGB3P11-201ENST00000440127 TIMM21Q9BVV7 248 aa2.37□□□□□ -2.03
HMGB3P11-201ENST00000440127 NOP10Q9NPE3 64 aaKnown RBP2.37□□□□□ -2.03
HMGB3P11-201ENST00000440127 DAZ3Q9NR90 486 aaKnown RBP2.37□□□□□ -2.03
HMGB3P11-201ENST00000440127 DHRS4-AS1Q9P1J3 65 aa2.37□□□□□ -2.03
HMGB3P11-201ENST00000440127 Q9UF83 564 aa2.37□□□□□ -2.03
HMGB3P11-201ENST00000440127 LAMA5O15230 3695 aa2.37□□□□□ -2.03
HMGB3P11-201ENST00000440127 LRBAP50851 2863 aa2.37□□□□□ -2.03
HMGB3P11-201ENST00000440127 CFAP47Q6ZTR5 3102 aa2.37□□□□□ -2.03
HMGB3P11-201ENST00000440127 IGSF10Q6WRI0 2623 aa2.36□□□□□ -2.03
HMGB3P11-201ENST00000440127 IGHV3-64A0A075B6Q5 118 aa2.36□□□□□ -2.03
HMGB3P11-201ENST00000440127 TRGV2A0A075B6R0 118 aa2.36□□□□□ -2.03
HMGB3P11-201ENST00000440127 A0A0J9YXY3 114 aa2.36□□□□□ -2.03
HMGB3P11-201ENST00000440127 TMEM238C9JI98 176 aa2.36□□□□□ -2.03
HMGB3P11-201ENST00000440127 F8W1H4 67 aa2.36□□□□□ -2.03
HMGB3P11-201ENST00000440127 APOMO95445 188 aa2.36□□□□□ -2.03
HMGB3P11-201ENST00000440127 IGHV3-30-3P0DP02 117 aa2.36□□□□□ -2.03
HMGB3P11-201ENST00000440127 INSL3P51460 131 aa2.36□□□□□ -2.03
HMGB3P11-201ENST00000440127 UBE2D1P51668 147 aa2.36□□□□□ -2.03
HMGB3P11-201ENST00000440127 KRTAP12-2P59991 146 aa2.36□□□□□ -2.03
HMGB3P11-201ENST00000440127 UBE2D3P61077 147 aa2.36□□□□□ -2.03
HMGB3P11-201ENST00000440127 UBE2D2P62837 147 aa2.36□□□□□ -2.03
HMGB3P11-201ENST00000440127 RBX1P62877 108 aa2.36□□□□□ -2.03
HMGB3P11-201ENST00000440127 RNASE13Q5GAN3 156 aaKnown RBP2.36□□□□□ -2.03
HMGB3P11-201ENST00000440127 Q6ZUT4 128 aa2.36□□□□□ -2.03
HMGB3P11-201ENST00000440127 FAM19A3Q7Z5A8 133 aa2.36□□□□□ -2.03
HMGB3P11-201ENST00000440127 MUSTN1Q8IVN3 82 aa2.36□□□□□ -2.03
HMGB3P11-201ENST00000440127 TMEM101Q96IK0 257 aa2.36□□□□□ -2.03
HMGB3P11-201ENST00000440127 VSIG2Q96IQ7 327 aa2.36□□□□□ -2.03
HMGB3P11-201ENST00000440127 SMR3AQ99954 134 aa2.36□□□□□ -2.03
HMGB3P11-201ENST00000440127 GTSF1LQ9H1H1 148 aa2.36□□□□□ -2.03
HMGB3P11-201ENST00000440127 CACNA1BQ00975 2339 aa2.36□□□□□ -2.03
HMGB3P11-201ENST00000440127 MUC4Q99102 2169 aa2.36□□□□□ -2.03
HMGB3P11-201ENST00000440127 SMG1Q96Q15 3661 aaKnown RBP2.36□□□□□ -2.03
HMGB3P11-201ENST00000440127 DCHS2Q6V1P9 2916 aa2.35□□□□□ -2.03
HMGB3P11-201ENST00000440127 AKAP6Q13023 2319 aa2.35□□□□□ -2.03
HMGB3P11-201ENST00000440127 TRAV8-3A0A0A6YYJ7 113 aa2.35□□□□□ -2.03
HMGB3P11-201ENST00000440127 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.35□□□□□ -2.03
HMGB3P11-201ENST00000440127 TRGV4A0A0C4DH28 118 aa2.35□□□□□ -2.03
HMGB3P11-201ENST00000440127 LOC107984156A0A0G2JMH3 177 aa2.35□□□□□ -2.03
HMGB3P11-201ENST00000440127 TRBV6-4A0A1B0GX49 114 aa2.35□□□□□ -2.03
HMGB3P11-201ENST00000440127 PLAC8L1A1L4L8 177 aa2.35□□□□□ -2.03
HMGB3P11-201ENST00000440127 SMIM9A6NGZ8 99 aa2.35□□□□□ -2.03
HMGB3P11-201ENST00000440127 UBE2L6O14933 153 aa2.35□□□□□ -2.03
HMGB3P11-201ENST00000440127 SPINK8P0C7L1 97 aa2.35□□□□□ -2.03
HMGB3P11-201ENST00000440127 PSMB2P49721 201 aa2.35□□□□□ -2.03
HMGB3P11-201ENST00000440127 HERVK_113P63121 156 aa2.35□□□□□ -2.03
HMGB3P11-201ENST00000440127 LYRM7Q5U5X0 104 aa2.35□□□□□ -2.03
HMGB3P11-201ENST00000440127 NTM-AS1Q6ZSK4 140 aa2.35□□□□□ -2.03
HMGB3P11-201ENST00000440127 SBSPONQ8IVN8 264 aa2.35□□□□□ -2.03
HMGB3P11-201ENST00000440127 ARL17AQ8IVW1 177 aa2.35□□□□□ -2.03
HMGB3P11-201ENST00000440127 C10orf126Q8N4M7 172 aa2.35□□□□□ -2.03
HMGB3P11-201ENST00000440127 CHCHD10Q8WYQ3 142 aaPredicted RBP2.35□□□□□ -2.03
HMGB3P11-201ENST00000440127 VPS25Q9BRG1 176 aa2.35□□□□□ -2.03
HMGB3P11-201ENST00000440127 TMEM243Q9BU79 118 aa2.35□□□□□ -2.03
HMGB3P11-201ENST00000440127 WFDC10AQ9H1F0 79 aa2.35□□□□□ -2.03
HMGB3P11-201ENST00000440127 PRO1854Q9UHT4 67 aa2.35□□□□□ -2.03
HMGB3P11-201ENST00000440127 NDUFA12Q9UI09 145 aa2.35□□□□□ -2.03
HMGB3P11-201ENST00000440127 ZZEF1O43149 2961 aa2.35□□□□□ -2.03
HMGB3P11-201ENST00000440127 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.35□□□□□ -2.03
HMGB3P11-201ENST00000440127 ZNF462Q96JM2 2506 aa2.34□□□□□ -2.03
HMGB3P11-201ENST00000440127 TRBV20-1A0A075B6N2 111 aa2.34□□□□□ -2.03
HMGB3P11-201ENST00000440127 A0A0B4J2C4 111 aa2.34□□□□□ -2.03
HMGB3P11-201ENST00000440127 H3BMG7 143 aa2.34□□□□□ -2.03
HMGB3P11-201ENST00000440127 NDUFA1O15239 70 aa2.34□□□□□ -2.03
HMGB3P11-201ENST00000440127 TIMM17BO60830 172 aa2.34□□□□□ -2.03
HMGB3P11-201ENST00000440127 SCGB1C2P0DMR2 95 aa2.34□□□□□ -2.03
HMGB3P11-201ENST00000440127 LINC00694P0DN24 101 aa2.34□□□□□ -2.03
HMGB3P11-201ENST00000440127 IFITM1P13164 125 aa2.34□□□□□ -2.03
HMGB3P11-201ENST00000440127 CXCL6P80162 114 aa2.34□□□□□ -2.03
HMGB3P11-201ENST00000440127 COX6A2Q02221 97 aa2.34□□□□□ -2.03
HMGB3P11-201ENST00000440127 CIRBPQ14011 172 aaKnown RBP2.34□□□□□ -2.03
HMGB3P11-201ENST00000440127 ZFAND6Q6FIF0 208 aa2.34□□□□□ -2.03
HMGB3P11-201ENST00000440127 KIR2DL5BQ8NHK3 375 aa2.34□□□□□ -2.03
HMGB3P11-201ENST00000440127 SPANXDQ9BXN6 97 aa2.34□□□□□ -2.03
HMGB3P11-201ENST00000440127 CDC42SE2Q9NRR3 84 aa2.34□□□□□ -2.03
HMGB3P11-201ENST00000440127 SPANXCQ9NY87 97 aa2.34□□□□□ -2.03
HMGB3P11-201ENST00000440127 CDKN2A-AS1Q9UH64 79 aa2.34□□□□□ -2.03
HMGB3P11-201ENST00000440127 ERG28Q9UKR5 140 aa2.34□□□□□ -2.03
HMGB3P11-201ENST00000440127 DCHS1Q96JQ0 3298 aa2.34□□□□□ -2.03
HMGB3P11-201ENST00000440127 ADGRG4Q8IZF6 3080 aa2.34□□□□□ -2.04
HMGB3P11-201ENST00000440127 USP9XQ93008 2570 aaPredicted RBP2.34□□□□□ -2.04
HMGB3P11-201ENST00000440127 USP24Q9UPU5 2620 aa2.34□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms