RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 LST1O00453 97 aa7.36□□□□□ -1.23
CD44-210ENST00000434472 LINC00482Q8N8I6 264 aa7.36□□□□□ -1.23
CD44-210ENST00000434472 CDIP1Q9H305 208 aa7.36□□□□□ -1.23
CD44-210ENST00000434472 FASNP49327 2511 aaKnown RBP7.35□□□□□ -1.23
CD44-210ENST00000434472 GAGE6Q13070 117 aa7.35□□□□□ -1.23
CD44-210ENST00000434472 C2orf82Q6UX34 121 aa7.35□□□□□ -1.23
CD44-210ENST00000434472 LINC00612Q8N6U2 182 aa7.35□□□□□ -1.23
CD44-210ENST00000434472 COX7B2Q8TF08 81 aa7.35□□□□□ -1.23
CD44-210ENST00000434472 DAND5Q8N907 189 aa7.34□□□□□ -1.23
CD44-210ENST00000434472 NTN5Q8WTR8 489 aaPredicted RBP7.34□□□□□ -1.23
CD44-210ENST00000434472 CHCHD5Q9BSY4 110 aa7.34□□□□□ -1.23
CD44-210ENST00000434472 C9orf66Q5T8R8 295 aa7.34□□□□□ -1.24
CD44-210ENST00000434472 UBE2WQ96B02 151 aa7.34□□□□□ -1.24
CD44-210ENST00000434472 CRLF1O75462 422 aa7.33□□□□□ -1.24
CD44-210ENST00000434472 KRTAP10-3P60369 221 aa7.33□□□□□ -1.24
CD44-210ENST00000434472 COX7A2LO14548 114 aa7.32□□□□□ -1.24
CD44-210ENST00000434472 FAM222AQ5U5X8 452 aa7.32□□□□□ -1.24
CD44-210ENST00000434472 TRAV13-2A0A0B4J235 113 aa7.31□□□□□ -1.24
CD44-210ENST00000434472 A0A0U1RRA0 63 aa7.31□□□□□ -1.24
CD44-210ENST00000434472 LYRM9A8MSI8 78 aa7.31□□□□□ -1.24
CD44-210ENST00000434472 DEFB130BP0DP73 79 aa7.31□□□□□ -1.24
CD44-210ENST00000434472 DEFB130AP0DP74 79 aa7.31□□□□□ -1.24
CD44-210ENST00000434472 SHISA2Q6UWI4 295 aa7.31□□□□□ -1.24
CD44-210ENST00000434472 SOSTDC1Q6X4U4 206 aa7.31□□□□□ -1.24
CD44-210ENST00000434472 CLEC2BQ92478 149 aa7.31□□□□□ -1.24
CD44-210ENST00000434472 FLNAP21333 2647 aaKnown RBP7.31□□□□□ -1.24
CD44-210ENST00000434472 SONP18583 2426 aaKnown RBP7.31□□□□□ -1.24
CD44-210ENST00000434472 IGLV4-60A0A075B6I1 120 aa7.3□□□□□ -1.24
CD44-210ENST00000434472 A0A087WZ39 114 aa7.3□□□□□ -1.24
CD44-210ENST00000434472 TRAV8-4A0A0B4J246 113 aa7.3□□□□□ -1.24
CD44-210ENST00000434472 LY6G6DO95868 133 aa7.3□□□□□ -1.24
CD44-210ENST00000434472 LINC01561Q8N1V8 128 aa7.3□□□□□ -1.24
CD44-210ENST00000434472 PRO0255Q9UI72 69 aa7.3□□□□□ -1.24
CD44-210ENST00000434472 X6R8D5 127 aa7.3□□□□□ -1.24
CD44-210ENST00000434472 TLN2Q9Y4G6 2542 aa7.3□□□□□ -1.24
CD44-210ENST00000434472 IGHV3OR16-9A0A0B4J2B5 98 aa7.3□□□□□ -1.24
CD44-210ENST00000434472 A0A1B0GUV1 79 aa7.3□□□□□ -1.24
CD44-210ENST00000434472 A0A1B0GV72 72 aa7.3□□□□□ -1.24
CD44-210ENST00000434472 GYPEP15421 78 aa7.3□□□□□ -1.24
CD44-210ENST00000434472 XGP55808 180 aa7.3□□□□□ -1.24
CD44-210ENST00000434472 DEFB121Q5J5C9 76 aa7.3□□□□□ -1.24
CD44-210ENST00000434472 WNK1Q9H4A3 2382 aa7.3□□□□□ -1.24
CD44-210ENST00000434472 CSMD2Q7Z408 3487 aa7.29□□□□□ -1.24
CD44-210ENST00000434472 IGKV3OR2-268A0A0C4DH90 116 aa7.29□□□□□ -1.24
CD44-210ENST00000434472 LINC00959A0A1B0GUT2 108 aa7.29□□□□□ -1.24
CD44-210ENST00000434472 IBA57-AS1B1ANH7 110 aa7.29□□□□□ -1.24
CD44-210ENST00000434472 TRACP01848 142 aa7.29□□□□□ -1.24
CD44-210ENST00000434472 MT-ATP8P03928 68 aa7.29□□□□□ -1.24
CD44-210ENST00000434472 SS18Q15532 418 aa7.29□□□□□ -1.24
CD44-210ENST00000434472 TOMM7Q9P0U1 55 aa7.29□□□□□ -1.24
CD44-210ENST00000434472 ANK3Q12955 4377 aaKnown RBP7.29□□□□□ -1.24
CD44-210ENST00000434472 CRPP02741 224 aa7.28□□□□□ -1.24
CD44-210ENST00000434472 APOC4P55056 127 aa7.28□□□□□ -1.24
CD44-210ENST00000434472 LINC00158P58513 81 aa7.28□□□□□ -1.24
CD44-210ENST00000434472 MRPL23Q16540 153 aaKnown RBP7.28□□□□□ -1.24
CD44-210ENST00000434472 SMR3AQ99954 134 aa7.28□□□□□ -1.24
CD44-210ENST00000434472 PDZD2O15018 2839 aa7.28□□□□□ -1.24
CD44-210ENST00000434472 AKAP9Q99996 3911 aa7.28□□□□□ -1.24
CD44-210ENST00000434472 TRAV26-1A0A087WT03 109 aa7.27□□□□□ -1.25
CD44-210ENST00000434472 TEX49A0A1B0GTD5 131 aa7.27□□□□□ -1.25
CD44-210ENST00000434472 MIR7-3HGQ8N6C7 128 aa7.27□□□□□ -1.25
CD44-210ENST00000434472 PAX4O43316 350 aa7.27□□□□□ -1.25
CD44-210ENST00000434472 RPL28P46779 137 aaKnown RBP7.27□□□□□ -1.25
CD44-210ENST00000434472 SND1-IT1Q9HBX3 110 aa7.27□□□□□ -1.25
CD44-210ENST00000434472 CCDC168Q8NDH2 2452 aa7.26□□□□□ -1.25
CD44-210ENST00000434472 FAM240AA0A1B0GVK7 77 aa7.26□□□□□ -1.25
CD44-210ENST00000434472 C5orf38Q86SI9 138 aa7.26□□□□□ -1.25
CD44-210ENST00000434472 SNCGO76070 127 aa7.25□□□□□ -1.25
CD44-210ENST00000434472 CKS1BP61024 79 aa7.25□□□□□ -1.25
CD44-210ENST00000434472 C6orf226Q5I0X4 101 aa7.25□□□□□ -1.25
CD44-210ENST00000434472 Q8IZM0 81 aa7.25□□□□□ -1.25
CD44-210ENST00000434472 H0YGX0 51 aa7.23□□□□□ -1.25
CD44-210ENST00000434472 ACYP1P07311 99 aa7.23□□□□□ -1.25
CD44-210ENST00000434472 CCL18P55774 89 aa7.23□□□□□ -1.25
CD44-210ENST00000434472 DAD1P61803 113 aa7.23□□□□□ -1.25
CD44-210ENST00000434472 Q6Q795 121 aa7.23□□□□□ -1.25
CD44-210ENST00000434472 CITED1Q99966 193 aa7.23□□□□□ -1.25
CD44-210ENST00000434472 MIFP14174 115 aa7.23□□□□□ -1.25
CD44-210ENST00000434472 TENM4Q6N022 2769 aa7.22□□□□□ -1.25
CD44-210ENST00000434472 IGKV2-28A0A075B6P5 120 aa7.22□□□□□ -1.25
CD44-210ENST00000434472 IGHV4-28A0A0C4DH34 117 aa7.22□□□□□ -1.25
CD44-210ENST00000434472 INAFM1C9JVW0 142 aa7.22□□□□□ -1.25
CD44-210ENST00000434472 IGKV2D-28P01615 120 aa7.22□□□□□ -1.25
CD44-210ENST00000434472 ATP5G1P05496 136 aa7.22□□□□□ -1.25
CD44-210ENST00000434472 BAALC-AS2P0C853 105 aa7.22□□□□□ -1.25
CD44-210ENST00000434472 CXCL5P42830 114 aa7.22□□□□□ -1.25
CD44-210ENST00000434472 XCL1P47992 114 aa7.22□□□□□ -1.25
CD44-210ENST00000434472 LINC00337Q8N6G1 96 aa7.22□□□□□ -1.25
CD44-210ENST00000434472 SETXQ7Z333 2677 aaKnown RBP7.21□□□□□ -1.25
CD44-210ENST00000434472 GAGE2BQ13066 116 aa7.21□□□□□ -1.26
CD44-210ENST00000434472 DEFB135Q30KP9 77 aa7.21□□□□□ -1.26
CD44-210ENST00000434472 GAGE2EQ4V326 116 aa7.21□□□□□ -1.26
CD44-210ENST00000434472 CD164L2Q6UWJ8 174 aa7.21□□□□□ -1.26
CD44-210ENST00000434472 C15orf53Q8NAA6 179 aa7.21□□□□□ -1.26
CD44-210ENST00000434472 GAGE2DQ9UEU5 116 aa7.21□□□□□ -1.26
CD44-210ENST00000434472 HIVEP2P31629 2446 aa7.21□□□□□ -1.26
CD44-210ENST00000434472 PFN2P35080 140 aa7.2□□□□□ -1.26
CD44-210ENST00000434472 CFAP161Q6P656 301 aa7.2□□□□□ -1.26
CD44-210ENST00000434472 GCN1Q92616 2671 aaKnown RBP7.2□□□□□ -1.26
CD44-210ENST00000434472 SPART-AS1P0CW21 52 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 222.8 ms