RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 IGLV4-60A0A075B6I1 120 aa6.28□□□□□ -1.4
LINCMD1-201ENST00000418518 IGHV3-64A0A075B6Q5 118 aa6.28□□□□□ -1.4
LINCMD1-201ENST00000418518 IGLL5B9A064 214 aa6.28□□□□□ -1.4
LINCMD1-201ENST00000418518 K7EP34 96 aa6.28□□□□□ -1.4
LINCMD1-201ENST00000418518 K7ERJ3 54 aa6.28□□□□□ -1.4
LINCMD1-201ENST00000418518 DEFB4AO15263 64 aa6.28□□□□□ -1.4
LINCMD1-201ENST00000418518 SH2D6Q7Z4S9 175 aa6.28□□□□□ -1.4
LINCMD1-201ENST00000418518 CHCHD5Q9BSY4 110 aa6.28□□□□□ -1.4
LINCMD1-201ENST00000418518 COL6A5A8TX70 2615 aa6.28□□□□□ -1.4
LINCMD1-201ENST00000418518 TRAV13-1A0A0B4J241 112 aa6.27□□□□□ -1.41
LINCMD1-201ENST00000418518 RAB37Q96AX2 223 aa6.27□□□□□ -1.41
LINCMD1-201ENST00000418518 IGHV3OR16-9A0A0B4J2B5 98 aa6.26□□□□□ -1.41
LINCMD1-201ENST00000418518 H3BNG1 76 aa6.26□□□□□ -1.41
LINCMD1-201ENST00000418518 FABP2P12104 132 aa6.26□□□□□ -1.41
LINCMD1-201ENST00000418518 MRPL23Q16540 153 aaKnown RBP6.26□□□□□ -1.41
LINCMD1-201ENST00000418518 GTF2H5Q6ZYL4 71 aa6.26□□□□□ -1.41
LINCMD1-201ENST00000418518 LINC01561Q8N1V8 128 aa6.26□□□□□ -1.41
LINCMD1-201ENST00000418518 ZNF625Q96I27 306 aaPredicted RBP6.26□□□□□ -1.41
LINCMD1-201ENST00000418518 PPDPFQ9H3Y8 114 aa6.26□□□□□ -1.41
LINCMD1-201ENST00000418518 PKD1L1Q8TDX9 2849 aa6.26□□□□□ -1.41
LINCMD1-201ENST00000418518 A0A0B4J2C4 111 aa6.25□□□□□ -1.41
LINCMD1-201ENST00000418518 IFITM1P13164 125 aa6.25□□□□□ -1.41
LINCMD1-201ENST00000418518 RBX1P62877 108 aa6.25□□□□□ -1.41
LINCMD1-201ENST00000418518 RPL24P83731 157 aaKnown RBP6.25□□□□□ -1.41
LINCMD1-201ENST00000418518 MIAQ16674 131 aa6.25□□□□□ -1.41
LINCMD1-201ENST00000418518 ICOSQ9Y6W8 199 aa6.25□□□□□ -1.41
LINCMD1-201ENST00000418518 A0A087WZ39 114 aa6.24□□□□□ -1.41
LINCMD1-201ENST00000418518 LINC00959A0A1B0GUT2 108 aa6.24□□□□□ -1.41
LINCMD1-201ENST00000418518 GAGE10A6NGK3 116 aa6.24□□□□□ -1.41
LINCMD1-201ENST00000418518 G3V4G9 280 aa6.24□□□□□ -1.41
LINCMD1-201ENST00000418518 CFC1BP0CG36 223 aa6.24□□□□□ -1.41
LINCMD1-201ENST00000418518 CFC1P0CG37 223 aa6.24□□□□□ -1.41
LINCMD1-201ENST00000418518 HERV-K104P63124 156 aa6.24□□□□□ -1.41
LINCMD1-201ENST00000418518 LELP1Q5T871 98 aa6.24□□□□□ -1.41
LINCMD1-201ENST00000418518 NAA38Q9BRA0 125 aaKnown RBP6.24□□□□□ -1.41
LINCMD1-201ENST00000418518 SPCS1Q9Y6A9 102 aa6.24□□□□□ -1.41
LINCMD1-201ENST00000418518 TENM3Q9P273 2699 aa6.23□□□□□ -1.41
LINCMD1-201ENST00000418518 A0A096LPF7 62 aa6.23□□□□□ -1.41
LINCMD1-201ENST00000418518 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.23□□□□□ -1.41
LINCMD1-201ENST00000418518 A4D1N5 150 aa6.23□□□□□ -1.41
LINCMD1-201ENST00000418518 EIF4EBP3O60516 100 aaPredicted RBP6.23□□□□□ -1.41
LINCMD1-201ENST00000418518 TSPAN13O95857 204 aa6.23□□□□□ -1.41
LINCMD1-201ENST00000418518 ADAMTSL4-AS1Q5T5F5 129 aa6.23□□□□□ -1.41
LINCMD1-201ENST00000418518 KPRPQ5T749 579 aaPredicted RBP6.23□□□□□ -1.41
LINCMD1-201ENST00000418518 MUSTN1Q8IVN3 82 aa6.23□□□□□ -1.41
LINCMD1-201ENST00000418518 Q9H8V8 135 aa6.23□□□□□ -1.41
LINCMD1-201ENST00000418518 RETNQ9HD89 108 aa6.23□□□□□ -1.41
LINCMD1-201ENST00000418518 PGPEP1Q9NXJ5 209 aa6.23□□□□□ -1.41
LINCMD1-201ENST00000418518 HUWE1Q7Z6Z7 4374 aaKnown RBP6.22□□□□□ -1.41
LINCMD1-201ENST00000418518 SFTA2Q6UW10 78 aa6.22□□□□□ -1.41
LINCMD1-201ENST00000418518 NOTCH1P46531 2555 aa6.22□□□□□ -1.41
LINCMD1-201ENST00000418518 APOMO95445 188 aa6.21□□□□□ -1.42
LINCMD1-201ENST00000418518 IGHV3-33P01772 117 aa6.21□□□□□ -1.42
LINCMD1-201ENST00000418518 SS18Q15532 418 aa6.21□□□□□ -1.42
LINCMD1-201ENST00000418518 COX7B2Q8TF08 81 aa6.21□□□□□ -1.42
LINCMD1-201ENST00000418518 PRO1854Q9UHT4 67 aa6.21□□□□□ -1.42
LINCMD1-201ENST00000418518 NBEAL1Q6ZS30 2694 aa6.2□□□□□ -1.42
LINCMD1-201ENST00000418518 TMEM262E9PQX1 116 aa6.2□□□□□ -1.42
LINCMD1-201ENST00000418518 HTN3P15516 51 aa6.2□□□□□ -1.42
LINCMD1-201ENST00000418518 CIRBPQ14011 172 aaKnown RBP6.2□□□□□ -1.42
LINCMD1-201ENST00000418518 LYRM7Q5U5X0 104 aa6.2□□□□□ -1.42
LINCMD1-201ENST00000418518 COPS9Q8WXC6 57 aa6.2□□□□□ -1.42
LINCMD1-201ENST00000418518 TM2D3Q9BRN9 247 aa6.2□□□□□ -1.42
LINCMD1-201ENST00000418518 CD164L2Q6UWJ8 174 aa6.19□□□□□ -1.42
LINCMD1-201ENST00000418518 Q6ZTC4 211 aa6.19□□□□□ -1.42
LINCMD1-201ENST00000418518 Q8IZM0 81 aa6.19□□□□□ -1.42
LINCMD1-201ENST00000418518 SPATA25Q9BR10 227 aa6.19□□□□□ -1.42
LINCMD1-201ENST00000418518 PRR34Q9NV39 138 aa6.19□□□□□ -1.42
LINCMD1-201ENST00000418518 IGKV3OR2-268A0A0C4DH90 116 aa6.18□□□□□ -1.42
LINCMD1-201ENST00000418518 A0A0J9YWU9 116 aa6.18□□□□□ -1.42
LINCMD1-201ENST00000418518 REG3AQ06141 175 aa6.18□□□□□ -1.42
LINCMD1-201ENST00000418518 LYPD5Q6UWN5 251 aa6.18□□□□□ -1.42
LINCMD1-201ENST00000418518 LINC00308Q8TCZ7 52 aa6.18□□□□□ -1.42
LINCMD1-201ENST00000418518 IBA57-AS1B1ANH7 110 aa6.17□□□□□ -1.42
LINCMD1-201ENST00000418518 K7EIL1 84 aa6.17□□□□□ -1.42
LINCMD1-201ENST00000418518 SOSTDC1Q6X4U4 206 aa6.17□□□□□ -1.42
LINCMD1-201ENST00000418518 C5orf38Q86SI9 138 aa6.17□□□□□ -1.42
LINCMD1-201ENST00000418518 LINC00269Q8N2A0 174 aa6.17□□□□□ -1.42
LINCMD1-201ENST00000418518 Q8N3U1 123 aa6.17□□□□□ -1.42
LINCMD1-201ENST00000418518 CHCHD10Q8WYQ3 142 aaPredicted RBP6.17□□□□□ -1.42
LINCMD1-201ENST00000418518 DNAH9Q9NYC9 4486 aa6.17□□□□□ -1.42
LINCMD1-201ENST00000418518 TRBV20-1A0A075B6N2 111 aa6.16□□□□□ -1.42
LINCMD1-201ENST00000418518 TRBV30A0A0K0K1B3 111 aa6.16□□□□□ -1.42
LINCMD1-201ENST00000418518 ANGP03950 147 aaKnown RBP6.16□□□□□ -1.42
LINCMD1-201ENST00000418518 PRSS2P07478 247 aa6.16□□□□□ -1.42
LINCMD1-201ENST00000418518 XCL1P47992 114 aa6.16□□□□□ -1.42
LINCMD1-201ENST00000418518 FOXI1Q12951 378 aa6.16□□□□□ -1.42
LINCMD1-201ENST00000418518 KIAA0087Q14695 138 aa6.16□□□□□ -1.42
LINCMD1-201ENST00000418518 MEIG1Q5JSS6 88 aa6.16□□□□□ -1.42
LINCMD1-201ENST00000418518 PRO0461Q9UI25 63 aa6.16□□□□□ -1.42
LINCMD1-201ENST00000418518 ERG28Q9UKR5 140 aa6.16□□□□□ -1.42
LINCMD1-201ENST00000418518 MGAM2Q2M2H8 2515 aa6.16□□□□□ -1.42
LINCMD1-201ENST00000418518 F8W1H4 67 aa6.15□□□□□ -1.42
LINCMD1-201ENST00000418518 COX7A2LO14548 114 aa6.15□□□□□ -1.42
LINCMD1-201ENST00000418518 CXCL5P42830 114 aa6.15□□□□□ -1.42
LINCMD1-201ENST00000418518 CLPSL2Q6UWE3 100 aa6.15□□□□□ -1.42
LINCMD1-201ENST00000418518 DAND5Q8N907 189 aa6.15□□□□□ -1.42
LINCMD1-201ENST00000418518 C11orf45Q8TAV5 145 aa6.15□□□□□ -1.42
LINCMD1-201ENST00000418518 TOMM7Q9P0U1 55 aa6.15□□□□□ -1.42
LINCMD1-201ENST00000418518 DEFB131BA0A096LNP1 70 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms