RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 DAZ3Q9NR90 486 aaKnown RBP10.28□□□□□ -0.76
HDAC9-208ENST00000417496 TRAV26-1A0A087WT03 109 aa10.28□□□□□ -0.76
HDAC9-208ENST00000417496 TRAV25A0A0B4J276 109 aa10.28□□□□□ -0.76
HDAC9-208ENST00000417496 GCN1Q92616 2671 aaKnown RBP10.27□□□□□ -0.76
HDAC9-208ENST00000417496 PLAC8L1A1L4L8 177 aa10.27□□□□□ -0.77
HDAC9-208ENST00000417496 F5H768 121 aa10.27□□□□□ -0.77
HDAC9-208ENST00000417496 TRBV10-1A0A0K0K1A3 114 aa10.27□□□□□ -0.77
HDAC9-208ENST00000417496 TRAV8-4A0A0B4J246 113 aa10.26□□□□□ -0.77
HDAC9-208ENST00000417496 RNF183Q96D59 192 aa10.26□□□□□ -0.77
HDAC9-208ENST00000417496 CITED1Q99966 193 aa10.26□□□□□ -0.77
HDAC9-208ENST00000417496 CSDC2Q9Y534 153 aaKnown RBP10.26□□□□□ -0.77
HDAC9-208ENST00000417496 UBE2L6O14933 153 aa10.25□□□□□ -0.77
HDAC9-208ENST00000417496 TMEM86BQ8N661 226 aa10.25□□□□□ -0.77
HDAC9-208ENST00000417496 TEX29Q8N6K0 151 aa10.25□□□□□ -0.77
HDAC9-208ENST00000417496 LINC01006Q8NI28 216 aa10.25□□□□□ -0.77
HDAC9-208ENST00000417496 SNCGO76070 127 aa10.24□□□□□ -0.77
HDAC9-208ENST00000417496 GAGE6Q13070 117 aa10.24□□□□□ -0.77
HDAC9-208ENST00000417496 TMEM243Q9BU79 118 aa10.24□□□□□ -0.77
HDAC9-208ENST00000417496 TOMM7Q9P0U1 55 aa10.24□□□□□ -0.77
HDAC9-208ENST00000417496 PDZD2O15018 2839 aa10.23□□□□□ -0.77
HDAC9-208ENST00000417496 LINC01600Q96MT4 127 aa10.23□□□□□ -0.77
HDAC9-208ENST00000417496 H3BT86 120 aa10.23□□□□□ -0.77
HDAC9-208ENST00000417496 FAM19A3Q7Z5A8 133 aa10.23□□□□□ -0.77
HDAC9-208ENST00000417496 IGLV4-60A0A075B6I1 120 aa10.22□□□□□ -0.77
HDAC9-208ENST00000417496 TRGV4A0A0C4DH28 118 aa10.22□□□□□ -0.77
HDAC9-208ENST00000417496 TTC32Q5I0X7 151 aa10.22□□□□□ -0.77
HDAC9-208ENST00000417496 C15orf53Q8NAA6 179 aa10.22□□□□□ -0.77
HDAC9-208ENST00000417496 ANAPC13Q9BS18 74 aa10.22□□□□□ -0.77
HDAC9-208ENST00000417496 C19orf73Q9NVV2 129 aa10.22□□□□□ -0.77
HDAC9-208ENST00000417496 GAGE2BQ13066 116 aa10.22□□□□□ -0.77
HDAC9-208ENST00000417496 GAGE2EQ4V326 116 aa10.22□□□□□ -0.77
HDAC9-208ENST00000417496 GAGE2DQ9UEU5 116 aa10.22□□□□□ -0.77
HDAC9-208ENST00000417496 VWFP04275 2813 aa10.21□□□□□ -0.78
HDAC9-208ENST00000417496 CSNK1G2-AS1Q8NCQ2 148 aa10.21□□□□□ -0.78
HDAC9-208ENST00000417496 SHISA2Q6UWI4 295 aa10.2□□□□□ -0.78
HDAC9-208ENST00000417496 C16orf74Q96GX8 76 aa10.2□□□□□ -0.78
HDAC9-208ENST00000417496 COX7A2LO14548 114 aa10.19□□□□□ -0.78
HDAC9-208ENST00000417496 NHLRC4P0CG21 123 aaPredicted RBP10.19□□□□□ -0.78
HDAC9-208ENST00000417496 DEFB130BP0DP73 79 aa10.19□□□□□ -0.78
HDAC9-208ENST00000417496 DEFB130AP0DP74 79 aa10.19□□□□□ -0.78
HDAC9-208ENST00000417496 FAM218AQ96MZ4 157 aa10.19□□□□□ -0.78
HDAC9-208ENST00000417496 HIVEP2P31629 2446 aa10.19□□□□□ -0.78
HDAC9-208ENST00000417496 IGLV1-51P01701 117 aa10.18□□□□□ -0.78
HDAC9-208ENST00000417496 CHCHD5Q9BSY4 110 aa10.18□□□□□ -0.78
HDAC9-208ENST00000417496 MIR7-3HGQ8N6C7 128 aa10.18□□□□□ -0.78
HDAC9-208ENST00000417496 TRBV6-4A0A1B0GX49 114 aa10.17□□□□□ -0.78
HDAC9-208ENST00000417496 KRTAP1-1Q07627 177 aa10.17□□□□□ -0.78
HDAC9-208ENST00000417496 FHL2Q14192 279 aa10.17□□□□□ -0.78
HDAC9-208ENST00000417496 ANK3Q12955 4377 aaKnown RBP10.17□□□□□ -0.78
HDAC9-208ENST00000417496 NOTCH2Q04721 2471 aa10.17□□□□□ -0.78
HDAC9-208ENST00000417496 C5orf38Q86SI9 138 aa10.17□□□□□ -0.78
HDAC9-208ENST00000417496 COX7B2Q8TF08 81 aa10.17□□□□□ -0.78
HDAC9-208ENST00000417496 HELZ2Q9BYK8 2649 aaKnown RBP10.17□□□□□ -0.78
HDAC9-208ENST00000417496 TRBV6-8A0A0A6YYG3 113 aa10.16□□□□□ -0.78
HDAC9-208ENST00000417496 HERV-K104P63124 156 aa10.16□□□□□ -0.78
HDAC9-208ENST00000417496 Q9HAA7 133 aa10.16□□□□□ -0.78
HDAC9-208ENST00000417496 NDUFV3P56181 108 aaKnown RBP10.15□□□□□ -0.78
HDAC9-208ENST00000417496 LINC00337Q8N6G1 96 aa10.15□□□□□ -0.78
HDAC9-208ENST00000417496 C11orf68Q9H3H3 251 aaKnown RBP10.15□□□□□ -0.78
HDAC9-208ENST00000417496 LINC00158P58513 81 aa10.15□□□□□ -0.78
HDAC9-208ENST00000417496 OVOL2Q9BRP0 275 aa10.15□□□□□ -0.78
HDAC9-208ENST00000417496 FASNP49327 2511 aaKnown RBP10.15□□□□□ -0.78
HDAC9-208ENST00000417496 IGKV2-28A0A075B6P5 120 aa10.14□□□□□ -0.79
HDAC9-208ENST00000417496 IGKV2D-28P01615 120 aa10.14□□□□□ -0.79
HDAC9-208ENST00000417496 PFN2P35080 140 aa10.14□□□□□ -0.79
HDAC9-208ENST00000417496 IGHV3OR16-9A0A0B4J2B5 98 aa10.14□□□□□ -0.79
HDAC9-208ENST00000417496 A0A096LPF7 62 aa10.13□□□□□ -0.79
HDAC9-208ENST00000417496 DEFB121Q5J5C9 76 aa10.13□□□□□ -0.79
HDAC9-208ENST00000417496 COPS9Q8WXC6 57 aa10.13□□□□□ -0.79
HDAC9-208ENST00000417496 SND1-IT1Q9HBX3 110 aa10.13□□□□□ -0.79
HDAC9-208ENST00000417496 UNC79Q9P2D8 2635 aa10.13□□□□□ -0.79
HDAC9-208ENST00000417496 RNASE1P07998 156 aaKnown RBP10.13□□□□□ -0.79
HDAC9-208ENST00000417496 BAALC-AS2P0C853 105 aa10.13□□□□□ -0.79
HDAC9-208ENST00000417496 CLPSL2Q6UWE3 100 aa10.12□□□□□ -0.79
HDAC9-208ENST00000417496 SMR3AQ99954 134 aa10.12□□□□□ -0.79
HDAC9-208ENST00000417496 C22orf24Q9Y442 160 aa10.12□□□□□ -0.79
HDAC9-208ENST00000417496 CMC4P56277 68 aaPredicted RBP10.11□□□□□ -0.79
HDAC9-208ENST00000417496 C16orf95Q9H693 158 aa10.11□□□□□ -0.79
HDAC9-208ENST00000417496 B5MCH6 92 aa10.1□□□□□ -0.79
HDAC9-208ENST00000417496 CRPP02741 224 aa10.1□□□□□ -0.79
HDAC9-208ENST00000417496 XCL1P47992 114 aa10.1□□□□□ -0.79
HDAC9-208ENST00000417496 CCL18P55774 89 aa10.1□□□□□ -0.79
HDAC9-208ENST00000417496 CCDC179H3BU77 68 aa10.09□□□□□ -0.79
HDAC9-208ENST00000417496 SMIM11BQ8TCY0 68 aa10.09□□□□□ -0.79
HDAC9-208ENST00000417496 FAM240AA0A1B0GVK7 77 aa10.09□□□□□ -0.79
HDAC9-208ENST00000417496 GYPEP15421 78 aa10.09□□□□□ -0.79
HDAC9-208ENST00000417496 KRTAP10-3P60369 221 aa10.09□□□□□ -0.79
HDAC9-208ENST00000417496 SMCR5Q8TEV8 140 aa10.09□□□□□ -0.79
HDAC9-208ENST00000417496 A0A087WYN8 130 aa10.08□□□□□ -0.8
HDAC9-208ENST00000417496 A0A087WZ39 114 aa10.08□□□□□ -0.8
HDAC9-208ENST00000417496 TRAV13-2A0A0B4J235 113 aa10.08□□□□□ -0.8
HDAC9-208ENST00000417496 LINC00959A0A1B0GUT2 108 aa10.08□□□□□ -0.8
HDAC9-208ENST00000417496 TRACP01848 142 aa10.08□□□□□ -0.8
HDAC9-208ENST00000417496 SPATA3Q8NHX4 192 aa10.08□□□□□ -0.8
HDAC9-208ENST00000417496 FAM110AQ9BQ89 295 aa10.08□□□□□ -0.8
HDAC9-208ENST00000417496 DEFB4AO15263 64 aa10.08□□□□□ -0.8
HDAC9-208ENST00000417496 ATP5G1P05496 136 aa10.08□□□□□ -0.8
HDAC9-208ENST00000417496 TENM1Q9UKZ4 2725 aa10.07□□□□□ -0.8
HDAC9-208ENST00000417496 RPL28P46779 137 aaKnown RBP10.07□□□□□ -0.8
HDAC9-208ENST00000417496 SS18L2Q9UHA2 77 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms