RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 OVOL2Q9BRP0 275 aa8.22□□□□□ -1.09
PDXDC1-202ENST00000396410 CSDC2Q9Y534 153 aaKnown RBP8.22□□□□□ -1.09
PDXDC1-202ENST00000396410 GIG44P09565 113 aaPredicted RBP8.22□□□□□ -1.09
PDXDC1-202ENST00000396410 DAD1P61803 113 aa8.22□□□□□ -1.09
PDXDC1-202ENST00000396410 C2orf82Q6UX34 121 aa8.22□□□□□ -1.09
PDXDC1-202ENST00000396410 H7C423 109 aa8.22□□□□□ -1.09
PDXDC1-202ENST00000396410 SS18Q15532 418 aa8.22□□□□□ -1.09
PDXDC1-202ENST00000396410 C5orf38Q86SI9 138 aa8.22□□□□□ -1.09
PDXDC1-202ENST00000396410 C6orf226Q5I0X4 101 aa8.21□□□□□ -1.09
PDXDC1-202ENST00000396410 CLPSL2Q6UWE3 100 aa8.21□□□□□ -1.09
PDXDC1-202ENST00000396410 FHL2Q14192 279 aa8.21□□□□□ -1.1
PDXDC1-202ENST00000396410 COX7B2Q8TF08 81 aa8.21□□□□□ -1.1
PDXDC1-202ENST00000396410 TIMM17BO60830 172 aa8.21□□□□□ -1.1
PDXDC1-202ENST00000396410 FAM104AQ969W3 186 aa8.21□□□□□ -1.1
PDXDC1-202ENST00000396410 SMIM1B2RUZ4 78 aa8.21□□□□□ -1.1
PDXDC1-202ENST00000396410 TRIAP1O43715 76 aa8.21□□□□□ -1.1
PDXDC1-202ENST00000396410 LINC01620Q4KN68 170 aa8.21□□□□□ -1.1
PDXDC1-202ENST00000396410 ANKRD29Q8N6D5 301 aa8.21□□□□□ -1.1
PDXDC1-202ENST00000396410 C19orf73Q9NVV2 129 aa8.2□□□□□ -1.1
PDXDC1-202ENST00000396410 XCL1P47992 114 aa8.2□□□□□ -1.1
PDXDC1-202ENST00000396410 FAM222AQ5U5X8 452 aa8.2□□□□□ -1.1
PDXDC1-202ENST00000396410 PRO0255Q9UI72 69 aa8.2□□□□□ -1.1
PDXDC1-202ENST00000396410 PFN2P35080 140 aa8.2□□□□□ -1.1
PDXDC1-202ENST00000396410 LINC00308Q8TCZ7 52 aa8.2□□□□□ -1.1
PDXDC1-202ENST00000396410 SMIM9A6NGZ8 99 aa8.19□□□□□ -1.1
PDXDC1-202ENST00000396410 F5H768 121 aa8.19□□□□□ -1.1
PDXDC1-202ENST00000396410 CRPP02741 224 aa8.19□□□□□ -1.1
PDXDC1-202ENST00000396410 OR13C6PQ8NH95 151 aa8.19□□□□□ -1.1
PDXDC1-202ENST00000396410 PRO0461Q9UI25 63 aa8.19□□□□□ -1.1
PDXDC1-202ENST00000396410 TRBV30A0A0K0K1B3 111 aa8.19□□□□□ -1.1
PDXDC1-202ENST00000396410 IGLV5-45A0A087WSX0 123 aa8.19□□□□□ -1.1
PDXDC1-202ENST00000396410 CSNK1G2-AS1Q8NCQ2 148 aa8.19□□□□□ -1.1
PDXDC1-202ENST00000396410 NTN5Q8WTR8 489 aaPredicted RBP8.19□□□□□ -1.1
PDXDC1-202ENST00000396410 CLEC2BQ92478 149 aa8.19□□□□□ -1.1
PDXDC1-202ENST00000396410 HELZ2Q9BYK8 2649 aaKnown RBP8.18□□□□□ -1.1
PDXDC1-202ENST00000396410 HECTD1Q9ULT8 2610 aa8.18□□□□□ -1.1
PDXDC1-202ENST00000396410 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.18□□□□□ -1.1
PDXDC1-202ENST00000396410 MALP21145 153 aa8.18□□□□□ -1.1
PDXDC1-202ENST00000396410 PLAC8L1A1L4L8 177 aa8.18□□□□□ -1.1
PDXDC1-202ENST00000396410 KRTAP10-3P60369 221 aa8.17□□□□□ -1.1
PDXDC1-202ENST00000396410 CFAP161Q6P656 301 aa8.17□□□□□ -1.1
PDXDC1-202ENST00000396410 LITAFQ99732 161 aa8.17□□□□□ -1.1
PDXDC1-202ENST00000396410 IGLV4-60A0A075B6I1 120 aa8.17□□□□□ -1.1
PDXDC1-202ENST00000396410 CKS1BP61024 79 aa8.17□□□□□ -1.1
PDXDC1-202ENST00000396410 KIR2DL5BQ8NHK3 375 aa8.17□□□□□ -1.1
PDXDC1-202ENST00000396410 IGLV5-39A0A0G2JS06 123 aa8.16□□□□□ -1.1
PDXDC1-202ENST00000396410 CARD19Q96LW7 228 aa8.16□□□□□ -1.1
PDXDC1-202ENST00000396410 SBSPONQ8IVN8 264 aa8.16□□□□□ -1.1
PDXDC1-202ENST00000396410 UBE2WQ96B02 151 aa8.16□□□□□ -1.1
PDXDC1-202ENST00000396410 LYRM9A8MSI8 78 aa8.16□□□□□ -1.1
PDXDC1-202ENST00000396410 ANGP03950 147 aaKnown RBP8.16□□□□□ -1.1
PDXDC1-202ENST00000396410 SMCPP49901 116 aaPredicted RBP8.16□□□□□ -1.1
PDXDC1-202ENST00000396410 MIR7-3HGQ8N6C7 128 aa8.16□□□□□ -1.1
PDXDC1-202ENST00000396410 TRBV10-2A0A0K0K1G8 114 aa8.15□□□□□ -1.1
PDXDC1-202ENST00000396410 TRAV8-4A0A0B4J246 113 aa8.15□□□□□ -1.1
PDXDC1-202ENST00000396410 ATP5G1P05496 136 aa8.15□□□□□ -1.1
PDXDC1-202ENST00000396410 NF1P21359 2839 aa8.14□□□□□ -1.11
PDXDC1-202ENST00000396410 UNC79Q9P2D8 2635 aa8.14□□□□□ -1.11
PDXDC1-202ENST00000396410 TRAV13-2A0A0B4J235 113 aa8.14□□□□□ -1.11
PDXDC1-202ENST00000396410 DNAL4O96015 105 aa8.14□□□□□ -1.11
PDXDC1-202ENST00000396410 SND1-IT1Q9HBX3 110 aa8.14□□□□□ -1.11
PDXDC1-202ENST00000396410 IGLV10-54A0A075B6I4 117 aa8.13□□□□□ -1.11
PDXDC1-202ENST00000396410 IGHV4-28A0A0C4DH34 117 aa8.13□□□□□ -1.11
PDXDC1-202ENST00000396410 SPART-AS1P0CW21 52 aa8.13□□□□□ -1.11
PDXDC1-202ENST00000396410 LINC00959A0A1B0GUT2 108 aa8.13□□□□□ -1.11
PDXDC1-202ENST00000396410 ITPR2Q14571 2701 aa8.13□□□□□ -1.11
PDXDC1-202ENST00000396410 TRAV26-1A0A087WT03 109 aa8.12□□□□□ -1.11
PDXDC1-202ENST00000396410 EIF4EBP3O60516 100 aaPredicted RBP8.12□□□□□ -1.11
PDXDC1-202ENST00000396410 SNCGO76070 127 aa8.12□□□□□ -1.11
PDXDC1-202ENST00000396410 SPATA25Q9BR10 227 aa8.12□□□□□ -1.11
PDXDC1-202ENST00000396410 X6R8D5 127 aa8.12□□□□□ -1.11
PDXDC1-202ENST00000396410 LINC00269Q8N2A0 174 aa8.11□□□□□ -1.11
PDXDC1-202ENST00000396410 RNF183Q96D59 192 aa8.11□□□□□ -1.11
PDXDC1-202ENST00000396410 MRPL23Q16540 153 aaKnown RBP8.11□□□□□ -1.11
PDXDC1-202ENST00000396410 FAM19A3Q7Z5A8 133 aa8.11□□□□□ -1.11
PDXDC1-202ENST00000396410 TEX49A0A1B0GTD5 131 aa8.1□□□□□ -1.11
PDXDC1-202ENST00000396410 H3BT86 120 aa8.1□□□□□ -1.11
PDXDC1-202ENST00000396410 COX7A2LO14548 114 aa8.1□□□□□ -1.11
PDXDC1-202ENST00000396410 MIFP14174 115 aa8.1□□□□□ -1.11
PDXDC1-202ENST00000396410 LST1O00453 97 aa8.09□□□□□ -1.11
PDXDC1-202ENST00000396410 SETXQ7Z333 2677 aaKnown RBP8.09□□□□□ -1.11
PDXDC1-202ENST00000396410 A0A087WZ39 114 aa8.09□□□□□ -1.11
PDXDC1-202ENST00000396410 IBA57-AS1B1ANH7 110 aa8.08□□□□□ -1.12
PDXDC1-202ENST00000396410 TENM4Q6N022 2769 aa8.08□□□□□ -1.12
PDXDC1-202ENST00000396410 C3orf56Q8N813 242 aa8.08□□□□□ -1.12
PDXDC1-202ENST00000396410 SCGB1A1P11684 91 aa8.08□□□□□ -1.12
PDXDC1-202ENST00000396410 REG3AQ06141 175 aa8.08□□□□□ -1.12
PDXDC1-202ENST00000396410 IGHV3OR16-9A0A0B4J2B5 98 aa8.07□□□□□ -1.12
PDXDC1-202ENST00000396410 SOSTDC1Q6X4U4 206 aa8.07□□□□□ -1.12
PDXDC1-202ENST00000396410 A0A1B0GV72 72 aa8.07□□□□□ -1.12
PDXDC1-202ENST00000396410 IGHV4-30-4P0DP06 118 aa8.07□□□□□ -1.12
PDXDC1-202ENST00000396410 SPATA3Q8NHX4 192 aa8.07□□□□□ -1.12
PDXDC1-202ENST00000396410 CHCHD10Q8WYQ3 142 aaPredicted RBP8.07□□□□□ -1.12
PDXDC1-202ENST00000396410 BAALC-AS2P0C853 105 aa8.06□□□□□ -1.12
PDXDC1-202ENST00000396410 A0A1B0GUV1 79 aa8.06□□□□□ -1.12
PDXDC1-202ENST00000396410 MT-ATP8P03928 68 aa8.06□□□□□ -1.12
PDXDC1-202ENST00000396410 CCL18P55774 89 aa8.04□□□□□ -1.12
PDXDC1-202ENST00000396410 GAGE2BQ13066 116 aa8.04□□□□□ -1.12
PDXDC1-202ENST00000396410 GAGE2EQ4V326 116 aa8.04□□□□□ -1.12
PDXDC1-202ENST00000396410 CITED1Q99966 193 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms