RNA–Protein interactions for RNA: ENST00000390945.1

RNU6-278P-201, Transcript of RNA, U6 small nuclear 278, pseudogene, humanhuman

BASIC

Gene RNU6-278P, Length 109 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-278P-201ENST00000390945 TPPP2P59282 170 aa-0.37□□□□□ -2.47
RNU6-278P-201ENST00000390945 TMEM170BQ5T4T1 132 aa-0.37□□□□□ -2.47
RNU6-278P-201ENST00000390945 Q6JHZ5 121 aa-0.37□□□□□ -2.47
RNU6-278P-201ENST00000390945 LINC00474Q9P2X8 69 aa-0.37□□□□□ -2.47
RNU6-278P-201ENST00000390945 COL6A3P12111 3177 aa-0.38□□□□□ -2.47
RNU6-278P-201ENST00000390945 MAP1BP46821 2468 aaKnown RBP-0.38□□□□□ -2.47
RNU6-278P-201ENST00000390945 GOLGA4Q13439 2230 aaKnown RBP-0.39□□□□□ -2.47
RNU6-278P-201ENST00000390945 KIAA0556O60303 1618 aa-0.39□□□□□ -2.47
RNU6-278P-201ENST00000390945 MAGI1Q96QZ7 1491 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-278P-201ENST00000390945 SHANK2Q9UPX8 1470 aa-0.4□□□□□ -2.47
RNU6-278P-201ENST00000390945 APOC3P02656 99 aa-0.4□□□□□ -2.47
RNU6-278P-201ENST00000390945 AKAIN1P0CW23 69 aa-0.4□□□□□ -2.47
RNU6-278P-201ENST00000390945 CDC42SE2Q9NRR3 84 aa-0.4□□□□□ -2.47
RNU6-278P-201ENST00000390945 LRP1BQ9NZR2 4599 aa-0.4□□□□□ -2.47
RNU6-278P-201ENST00000390945 WNK1Q9H4A3 2382 aa-0.4□□□□□ -2.47
RNU6-278P-201ENST00000390945 XRN1Q8IZH2 1706 aaKnown RBP-0.41□□□□□ -2.47
RNU6-278P-201ENST00000390945 TRBV6-1A0A0K0K1D8 114 aa-0.41□□□□□ -2.48
RNU6-278P-201ENST00000390945 LOC285095A0A1B0GVY8 99 aa-0.41□□□□□ -2.48
RNU6-278P-201ENST00000390945 EFCAB10A6NFE3 127 aa-0.41□□□□□ -2.48
RNU6-278P-201ENST00000390945 RPL13AP3Q6NVV1 102 aa-0.41□□□□□ -2.48
RNU6-278P-201ENST00000390945 DEFB123Q8N688 67 aa-0.41□□□□□ -2.48
RNU6-278P-201ENST00000390945 MYOZ3Q8TDC0 251 aa-0.41□□□□□ -2.48
RNU6-278P-201ENST00000390945 SPRR4Q96PI1 79 aa-0.41□□□□□ -2.48
RNU6-278P-201ENST00000390945 EP300Q09472 2414 aaPredicted RBP-0.41□□□□□ -2.48
RNU6-278P-201ENST00000390945 MAPKBP1O60336 1514 aa-0.42□□□□□ -2.48
RNU6-278P-201ENST00000390945 COL4A6Q14031 1691 aa-0.42□□□□□ -2.48
RNU6-278P-201ENST00000390945 SETXQ7Z333 2677 aaKnown RBP-0.42□□□□□ -2.48
RNU6-278P-201ENST00000390945 DLEU1O43261 78 aa-0.42□□□□□ -2.48
RNU6-278P-201ENST00000390945 SFT2D2O95562 160 aa-0.42□□□□□ -2.48
RNU6-278P-201ENST00000390945 IFNGP01579 166 aa-0.42□□□□□ -2.48
RNU6-278P-201ENST00000390945 S100A3P33764 101 aa-0.42□□□□□ -2.48
RNU6-278P-201ENST00000390945 KRTAP6-1Q3LI64 71 aa-0.42□□□□□ -2.48
RNU6-278P-201ENST00000390945 MRPL54Q6P161 138 aaKnown RBP-0.42□□□□□ -2.48
RNU6-278P-201ENST00000390945 GAPVD1Q14C86 1478 aa-0.42□□□□□ -2.48
RNU6-278P-201ENST00000390945 WDR7Q9Y4E6 1490 aa-0.42□□□□□ -2.48
RNU6-278P-201ENST00000390945 MAP1AP78559 2803 aaPredicted RBP-0.42□□□□□ -2.48
RNU6-278P-201ENST00000390945 A0A0G2JMZ2 1700 aa-0.43□□□□□ -2.48
RNU6-278P-201ENST00000390945 UBE2L5PA0A1B0GUS4 154 aa-0.43□□□□□ -2.48
RNU6-278P-201ENST00000390945 UBE2L3P68036 154 aaKnown RBP-0.43□□□□□ -2.48
RNU6-278P-201ENST00000390945 DCDP81605 110 aaKnown RBP-0.43□□□□□ -2.48
RNU6-278P-201ENST00000390945 C9orf153Q5TBE3 101 aa-0.43□□□□□ -2.48
RNU6-278P-201ENST00000390945 PZPP20742 1482 aa-0.43□□□□□ -2.48
RNU6-278P-201ENST00000390945 ARHGAP5Q13017 1502 aa-0.43□□□□□ -2.48
RNU6-278P-201ENST00000390945 PAPPA2Q9BXP8 1791 aa-0.44□□□□□ -2.48
RNU6-278P-201ENST00000390945 SCAPERQ9BY12 1400 aa-0.44□□□□□ -2.48
RNU6-278P-201ENST00000390945 A0A1B0GV90 55 aa-0.44□□□□□ -2.48
RNU6-278P-201ENST00000390945 ATP5EP56381 51 aaPredicted RBP-0.44□□□□□ -2.48
RNU6-278P-201ENST00000390945 PIGYQ3MUY2 71 aa-0.44□□□□□ -2.48
RNU6-278P-201ENST00000390945 FAM167A-AS1Q96KT0 104 aa-0.44□□□□□ -2.48
RNU6-278P-201ENST00000390945 ADGRL2O95490 1459 aa-0.44□□□□□ -2.48
RNU6-278P-201ENST00000390945 PDCD11Q14690 1871 aaKnown RBP-0.44□□□□□ -2.48
RNU6-278P-201ENST00000390945 URB1O60287 2271 aaKnown RBP-0.44□□□□□ -2.48
RNU6-278P-201ENST00000390945 FAM135AQ9P2D6 1515 aa-0.44□□□□□ -2.48
RNU6-278P-201ENST00000390945 DPH3P1Q9H4G8 78 aa-0.45□□□□□ -2.48
RNU6-278P-201ENST00000390945 CHD8Q9HCK8 2581 aa-0.46□□□□□ -2.48
RNU6-278P-201ENST00000390945 CHKB-CPT1BH3BT56 60 aa-0.46□□□□□ -2.48
RNU6-278P-201ENST00000390945 MGPP08493 103 aa-0.46□□□□□ -2.48
RNU6-278P-201ENST00000390945 UBE2D3P61077 147 aa-0.46□□□□□ -2.48
RNU6-278P-201ENST00000390945 UBE2D2P62837 147 aa-0.46□□□□□ -2.48
RNU6-278P-201ENST00000390945 IER3IP1Q9Y5U9 82 aa-0.46□□□□□ -2.48
RNU6-278P-201ENST00000390945 APC2O95996 2303 aa-0.47□□□□□ -2.48
RNU6-278P-201ENST00000390945 IGLC1P0CG04 106 aa-0.47□□□□□ -2.48
RNU6-278P-201ENST00000390945 FAM223AQ8IWN6 122 aa-0.47□□□□□ -2.48
RNU6-278P-201ENST00000390945 TMEM263Q8WUH6 116 aaKnown RBP-0.47□□□□□ -2.48
RNU6-278P-201ENST00000390945 NXT2Q9NPJ8 142 aaKnown RBP-0.47□□□□□ -2.48
RNU6-278P-201ENST00000390945 C1orf167Q5SNV9 1468 aa-0.48□□□□□ -2.49
RNU6-278P-201ENST00000390945 DNAJC13O75165 2243 aa-0.48□□□□□ -2.49
RNU6-278P-201ENST00000390945 FXYD6-FXYD2A0A087WZ82 144 aa-0.48□□□□□ -2.49
RNU6-278P-201ENST00000390945 COX6B1P14854 86 aa-0.48□□□□□ -2.49
RNU6-278P-201ENST00000390945 UQCR10Q9UDW1 63 aa-0.48□□□□□ -2.49
RNU6-278P-201ENST00000390945 KIAA1551Q9HCM1 1747 aa-0.48□□□□□ -2.49
RNU6-278P-201ENST00000390945 FLNBO75369 2602 aaKnown RBP-0.49□□□□□ -2.49
RNU6-278P-201ENST00000390945 PEG3Q9GZU2 1588 aa-0.49□□□□□ -2.49
RNU6-278P-201ENST00000390945 MARF1Q9Y4F3 1742 aaKnown RBP-0.49□□□□□ -2.49
RNU6-278P-201ENST00000390945 GNG4P50150 75 aa-0.49□□□□□ -2.49
RNU6-278P-201ENST00000390945 C10orf113Q5VZT2 155 aa-0.49□□□□□ -2.49
RNU6-278P-201ENST00000390945 MUC2Q02817 5179 aa-0.49□□□□□ -2.49
RNU6-278P-201ENST00000390945 FMN2Q9NZ56 1722 aa-0.5□□□□□ -2.49
RNU6-278P-201ENST00000390945 SRRM2Q9UQ35 2752 aaKnown RBP-0.5□□□□□ -2.49
RNU6-278P-201ENST00000390945 ANKRD36A6QL64 1941 aa-0.5□□□□□ -2.49
RNU6-278P-201ENST00000390945 K7EQZ3 153 aa-0.5□□□□□ -2.49
RNU6-278P-201ENST00000390945 SPRR1BP22528 89 aa-0.5□□□□□ -2.49
RNU6-278P-201ENST00000390945 Q0VG73 95 aa-0.5□□□□□ -2.49
RNU6-278P-201ENST00000390945 C2orf88Q9BSF0 95 aa-0.5□□□□□ -2.49
RNU6-278P-201ENST00000390945 SHPRHQ149N8 1683 aa-0.5□□□□□ -2.49
RNU6-278P-201ENST00000390945 ACANP16112 2415 aa-0.5□□□□□ -2.49
RNU6-278P-201ENST00000390945 LINC00959A0A1B0GUT2 108 aa-0.51□□□□□ -2.49
RNU6-278P-201ENST00000390945 CORTO00230 105 aa-0.51□□□□□ -2.49
RNU6-278P-201ENST00000390945 POLA1P09884 1462 aaPredicted RBP-0.51□□□□□ -2.49
RNU6-278P-201ENST00000390945 ZFYVE16Q7Z3T8 1539 aa-0.51□□□□□ -2.49
RNU6-278P-201ENST00000390945 PDZD2O15018 2839 aa-0.51□□□□□ -2.49
RNU6-278P-201ENST00000390945 TARBP1Q13395 1621 aaKnown RBP-0.52□□□□□ -2.49
RNU6-278P-201ENST00000390945 NCOA3Q9Y6Q9 1424 aa-0.52□□□□□ -2.49
RNU6-278P-201ENST00000390945 TRBV7-4A0A0J9YYF1 115 aa-0.52□□□□□ -2.49
RNU6-278P-201ENST00000390945 FAM24AA6NFZ4 105 aa-0.52□□□□□ -2.49
RNU6-278P-201ENST00000390945 F6UZH7 168 aa-0.52□□□□□ -2.49
RNU6-278P-201ENST00000390945 SNAPC5O75971 98 aa-0.52□□□□□ -2.49
RNU6-278P-201ENST00000390945 SPRR2BP35325 72 aa-0.52□□□□□ -2.49
RNU6-278P-201ENST00000390945 GNG11P61952 73 aa-0.52□□□□□ -2.49
RNU6-278P-201ENST00000390945 SARNPP82979 210 aaKnown RBP-0.52□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms