RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 TSPEAR-AS2P59090 65 aa12.32□□□□□ -0.44
PDX1-201ENST00000381033 RHOHQ15669 191 aa12.32□□□□□ -0.44
PDX1-201ENST00000381033 ANKRD29Q8N6D5 301 aa12.32□□□□□ -0.44
PDX1-201ENST00000381033 LINC00467Q9BRT7 94 aa12.32□□□□□ -0.44
PDX1-201ENST00000381033 MYMXA0A1B0GTQ4 84 aa12.31□□□□□ -0.44
PDX1-201ENST00000381033 A0A0J9YXV3 536 aa12.31□□□□□ -0.44
PDX1-201ENST00000381033 SRSF9Q13242 221 aaKnown RBP eCLIP12.31□□□□□ -0.44
PDX1-201ENST00000381033 SBSPONQ8IVN8 264 aa12.31□□□□□ -0.44
PDX1-201ENST00000381033 ZNF815PA8K554 130 aa12.3□□□□□ -0.44
PDX1-201ENST00000381033 LYRM7Q5U5X0 104 aa12.3□□□□□ -0.44
PDX1-201ENST00000381033 C2orf48Q96LS8 159 aa12.3□□□□□ -0.44
PDX1-201ENST00000381033 CHCHD7Q9BUK0 85 aa12.3□□□□□ -0.44
PDX1-201ENST00000381033 F8P00451 2351 aa12.29□□□□□ -0.44
PDX1-201ENST00000381033 CRYGAP11844 174 aa12.29□□□□□ -0.44
PDX1-201ENST00000381033 TMEM258P61165 79 aa12.29□□□□□ -0.44
PDX1-201ENST00000381033 PLAC8L1A1L4L8 177 aa12.29□□□□□ -0.44
PDX1-201ENST00000381033 HIST1H4GQ99525 98 aa12.28□□□□□ -0.44
PDX1-201ENST00000381033 PSMB2P49721 201 aa12.28□□□□□ -0.44
PDX1-201ENST00000381033 CSNK1G2-AS1Q8NCQ2 148 aa12.28□□□□□ -0.44
PDX1-201ENST00000381033 PIK3CD-AS1Q5SR53 167 aa12.27□□□□□ -0.45
PDX1-201ENST00000381033 LINC00482Q8N8I6 264 aa12.27□□□□□ -0.45
PDX1-201ENST00000381033 TMEM263Q8WUH6 116 aaKnown RBP12.27□□□□□ -0.45
PDX1-201ENST00000381033 NDUFA11Q86Y39 141 aa12.26□□□□□ -0.45
PDX1-201ENST00000381033 SPANXDQ9BXN6 97 aa12.26□□□□□ -0.45
PDX1-201ENST00000381033 TRBV7-7A0A0K0K1E9 115 aa12.26□□□□□ -0.45
PDX1-201ENST00000381033 TRACP01848 142 aa12.26□□□□□ -0.45
PDX1-201ENST00000381033 SCGB1C2P0DMR2 95 aa12.26□□□□□ -0.45
PDX1-201ENST00000381033 SCGB1D4Q6XE38 83 aa12.26□□□□□ -0.45
PDX1-201ENST00000381033 TRBV7-3A0A075B6L6 115 aa12.25□□□□□ -0.45
PDX1-201ENST00000381033 SLC25A29Q8N8R3 303 aa12.25□□□□□ -0.45
PDX1-201ENST00000381033 LINC01549A6NIU2 74 aa12.25□□□□□ -0.45
PDX1-201ENST00000381033 DSCR8Q96T75 97 aa12.25□□□□□ -0.45
PDX1-201ENST00000381033 LOC100131303A0A0U1RQF7 123 aa12.24□□□□□ -0.45
PDX1-201ENST00000381033 ZNF22P17026 224 aaPredicted RBP12.24□□□□□ -0.45
PDX1-201ENST00000381033 UBE2D4Q9Y2X8 147 aa12.24□□□□□ -0.45
PDX1-201ENST00000381033 COX7CP15954 63 aa12.23□□□□□ -0.45
PDX1-201ENST00000381033 A0A0U1RQV1 116 aa12.22□□□□□ -0.45
PDX1-201ENST00000381033 TRAV8-3A0A0A6YYJ7 113 aa12.22□□□□□ -0.45
PDX1-201ENST00000381033 TRAV8-4A0A0B4J246 113 aa12.22□□□□□ -0.45
PDX1-201ENST00000381033 PAPPA-AS1Q5QFB9 102 aa12.22□□□□□ -0.45
PDX1-201ENST00000381033 AMELXQ99217 191 aa12.22□□□□□ -0.45
PDX1-201ENST00000381033 NTM-AS1Q6ZSK4 140 aa12.21□□□□□ -0.45
PDX1-201ENST00000381033 TRGV2A0A075B6R0 118 aa12.21□□□□□ -0.45
PDX1-201ENST00000381033 TRAV13-1A0A0B4J241 112 aa12.21□□□□□ -0.45
PDX1-201ENST00000381033 TMEM223A0PJW6 202 aa12.21□□□□□ -0.45
PDX1-201ENST00000381033 HERVK_113P61574 105 aa12.2□□□□□ -0.46
PDX1-201ENST00000381033 A0A0J9YY99 117 aa12.19□□□□□ -0.46
PDX1-201ENST00000381033 K7EQD1 137 aa12.19□□□□□ -0.46
PDX1-201ENST00000381033 PKD1L1Q8TDX9 2849 aa12.19□□□□□ -0.46
PDX1-201ENST00000381033 ATP5G1P05496 136 aa12.19□□□□□ -0.46
PDX1-201ENST00000381033 DAZ2Q13117 558 aaKnown RBP12.19□□□□□ -0.46
PDX1-201ENST00000381033 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.19□□□□□ -0.46
PDX1-201ENST00000381033 CMC4P56277 68 aaPredicted RBP12.18□□□□□ -0.46
PDX1-201ENST00000381033 C16orf74Q96GX8 76 aa12.18□□□□□ -0.46
PDX1-201ENST00000381033 FBN1P35555 2871 aaKnown RBP12.18□□□□□ -0.46
PDX1-201ENST00000381033 hADV29S1A0JD25 119 aa12.18□□□□□ -0.46
PDX1-201ENST00000381033 LINC01620Q4KN68 170 aa12.18□□□□□ -0.46
PDX1-201ENST00000381033 PRIMA1Q86XR5 153 aa12.18□□□□□ -0.46
PDX1-201ENST00000381033 LINC01561Q8N1V8 128 aa12.17□□□□□ -0.46
PDX1-201ENST00000381033 IMUPQ9GZP8 106 aa12.17□□□□□ -0.46
PDX1-201ENST00000381033 DEFB130BP0DP73 79 aa12.16□□□□□ -0.46
PDX1-201ENST00000381033 DEFB130AP0DP74 79 aa12.16□□□□□ -0.46
PDX1-201ENST00000381033 LGALS3P17931 250 aaKnown RBP12.16□□□□□ -0.46
PDX1-201ENST00000381033 MRPS36P82909 103 aaKnown RBP12.16□□□□□ -0.46
PDX1-201ENST00000381033 STAB1Q9NY15 2570 aa12.16□□□□□ -0.46
PDX1-201ENST00000381033 LOC107984156A0A0G2JMH3 177 aa12.16□□□□□ -0.46
PDX1-201ENST00000381033 RPL36AP83881 106 aaKnown RBP12.16□□□□□ -0.46
PDX1-201ENST00000381033 ARL17AQ8IVW1 177 aa12.16□□□□□ -0.46
PDX1-201ENST00000381033 RPL36ALQ969Q0 106 aaKnown RBP12.16□□□□□ -0.46
PDX1-201ENST00000381033 SFTA2Q6UW10 78 aa12.15□□□□□ -0.46
PDX1-201ENST00000381033 IGHV3-30-3P0DP02 117 aa12.14□□□□□ -0.47
PDX1-201ENST00000381033 UBE2D3P61077 147 aa12.14□□□□□ -0.47
PDX1-201ENST00000381033 UBE2D2P62837 147 aa12.14□□□□□ -0.47
PDX1-201ENST00000381033 COX6A2Q02221 97 aa12.14□□□□□ -0.47
PDX1-201ENST00000381033 LEPROTO15243 131 aa12.14□□□□□ -0.47
PDX1-201ENST00000381033 DEFB4AO15263 64 aa12.14□□□□□ -0.47
PDX1-201ENST00000381033 TCL1BO95988 128 aa12.13□□□□□ -0.47
PDX1-201ENST00000381033 DGAT2L7PQ6IED9 249 aa12.13□□□□□ -0.47
PDX1-201ENST00000381033 OVOL2Q9BRP0 275 aa12.13□□□□□ -0.47
PDX1-201ENST00000381033 CDKN2A-AS1Q9UH64 79 aa12.13□□□□□ -0.47
PDX1-201ENST00000381033 TRGV4A0A0C4DH28 118 aa12.12□□□□□ -0.47
PDX1-201ENST00000381033 CD164Q04900 197 aa12.12□□□□□ -0.47
PDX1-201ENST00000381033 ANK2Q01484 3957 aa12.12□□□□□ -0.47
PDX1-201ENST00000381033 TIMM21Q9BVV7 248 aa12.12□□□□□ -0.47
PDX1-201ENST00000381033 CYSTM1Q9H1C7 97 aa12.12□□□□□ -0.47
PDX1-201ENST00000381033 UBE2D1P51668 147 aa12.11□□□□□ -0.47
PDX1-201ENST00000381033 FHL2Q14192 279 aa12.11□□□□□ -0.47
PDX1-201ENST00000381033 TRBV10-1A0A0K0K1A3 114 aa12.11□□□□□ -0.47
PDX1-201ENST00000381033 SLC25A20O43772 301 aa12.11□□□□□ -0.47
PDX1-201ENST00000381033 IGHV3-30P01768 117 aa12.11□□□□□ -0.47
PDX1-201ENST00000381033 IGHV3-30-5P0DP03 117 aa12.11□□□□□ -0.47
PDX1-201ENST00000381033 X6R8D5 127 aa12.1□□□□□ -0.47
PDX1-201ENST00000381033 PMAIP1Q13794 54 aa12.1□□□□□ -0.47
PDX1-201ENST00000381033 DEFB135Q30KP9 77 aa12.09□□□□□ -0.47
PDX1-201ENST00000381033 NDUFC2O95298 119 aa12.09□□□□□ -0.47
PDX1-201ENST00000381033 DAZ4Q86SG3 579 aaKnown RBP12.09□□□□□ -0.47
PDX1-201ENST00000381033 DAZ3Q9NR90 486 aaKnown RBP12.09□□□□□ -0.47
PDX1-201ENST00000381033 NTN5Q8WTR8 489 aaPredicted RBP12.08□□□□□ -0.48
PDX1-201ENST00000381033 C9orf66Q5T8R8 295 aa12.08□□□□□ -0.48
PDX1-201ENST00000381033 BRK1Q8WUW1 75 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms