RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 HERVK_113P63121 156 aa8.97□□□□□ -0.97
VPS16-202ENST00000380445 SMIM9A6NGZ8 99 aa8.97□□□□□ -0.97
VPS16-202ENST00000380445 UBE2L6O14933 153 aa8.97□□□□□ -0.97
VPS16-202ENST00000380445 NTM-AS1Q6ZSK4 140 aa8.97□□□□□ -0.97
VPS16-202ENST00000380445 IGLV5-45A0A087WSX0 123 aa8.96□□□□□ -0.97
VPS16-202ENST00000380445 TRAV8-3A0A0A6YYJ7 113 aa8.96□□□□□ -0.97
VPS16-202ENST00000380445 H7C423 109 aa8.96□□□□□ -0.97
VPS16-202ENST00000380445 KIR2DL5BQ8NHK3 375 aa8.96□□□□□ -0.97
VPS16-202ENST00000380445 TMEM243Q9BU79 118 aa8.96□□□□□ -0.97
VPS16-202ENST00000380445 A0A0J9YXY3 114 aa8.96□□□□□ -0.98
VPS16-202ENST00000380445 FAM19A3Q7Z5A8 133 aa8.96□□□□□ -0.98
VPS16-202ENST00000380445 TMEM101Q96IK0 257 aa8.96□□□□□ -0.98
VPS16-202ENST00000380445 SLC25A20O43772 301 aa8.95□□□□□ -0.98
VPS16-202ENST00000380445 C10orf126Q8N4M7 172 aa8.95□□□□□ -0.98
VPS16-202ENST00000380445 NDUFA12Q9UI09 145 aa8.95□□□□□ -0.98
VPS16-202ENST00000380445 NOTCH3Q9UM47 2321 aa8.95□□□□□ -0.98
VPS16-202ENST00000380445 CFC1BP0CG36 223 aa8.95□□□□□ -0.98
VPS16-202ENST00000380445 CFC1P0CG37 223 aa8.95□□□□□ -0.98
VPS16-202ENST00000380445 LINC00694P0DN24 101 aa8.95□□□□□ -0.98
VPS16-202ENST00000380445 LOC107984640A0A0U1RRK4 108 aa8.95□□□□□ -0.98
VPS16-202ENST00000380445 FHL2Q14192 279 aa8.95□□□□□ -0.98
VPS16-202ENST00000380445 C15orf53Q8NAA6 179 aa8.95□□□□□ -0.98
VPS16-202ENST00000380445 CDKN2A-AS1Q9UH64 79 aa8.95□□□□□ -0.98
VPS16-202ENST00000380445 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.94□□□□□ -0.98
VPS16-202ENST00000380445 CDC42SE2Q9NRR3 84 aa8.94□□□□□ -0.98
VPS16-202ENST00000380445 PRO1854Q9UHT4 67 aa8.94□□□□□ -0.98
VPS16-202ENST00000380445 C9JAW5 83 aa8.93□□□□□ -0.98
VPS16-202ENST00000380445 LINC00242Q5T6M2 205 aa8.93□□□□□ -0.98
VPS16-202ENST00000380445 MUSTN1Q8IVN3 82 aa8.93□□□□□ -0.98
VPS16-202ENST00000380445 JMJD1CQ15652 2540 aa8.92□□□□□ -0.98
VPS16-202ENST00000380445 WIPF1O43516 503 aa8.92□□□□□ -0.98
VPS16-202ENST00000380445 LINC00612Q8N6U2 182 aa8.92□□□□□ -0.98
VPS16-202ENST00000380445 F8P00451 2351 aa8.92□□□□□ -0.98
VPS16-202ENST00000380445 TRAV8-4A0A0B4J246 113 aa8.92□□□□□ -0.98
VPS16-202ENST00000380445 SPANXDQ9BXN6 97 aa8.92□□□□□ -0.98
VPS16-202ENST00000380445 SPANXCQ9NY87 97 aa8.92□□□□□ -0.98
VPS16-202ENST00000380445 A0A0B4J2C4 111 aa8.91□□□□□ -0.98
VPS16-202ENST00000380445 LOC100131303A0A0U1RQF7 123 aa8.91□□□□□ -0.98
VPS16-202ENST00000380445 DEFB130BP0DP73 79 aa8.91□□□□□ -0.98
VPS16-202ENST00000380445 DEFB130AP0DP74 79 aa8.91□□□□□ -0.98
VPS16-202ENST00000380445 MRPL23Q16540 153 aaKnown RBP8.91□□□□□ -0.98
VPS16-202ENST00000380445 NTN5Q8WTR8 489 aaPredicted RBP8.91□□□□□ -0.98
VPS16-202ENST00000380445 CHCHD5Q9BSY4 110 aa8.91□□□□□ -0.98
VPS16-202ENST00000380445 TRAV13-1A0A0B4J241 112 aa8.91□□□□□ -0.98
VPS16-202ENST00000380445 TIMM17BO60830 172 aa8.91□□□□□ -0.98
VPS16-202ENST00000380445 APOC4P55056 127 aa8.91□□□□□ -0.98
VPS16-202ENST00000380445 COX6A2Q02221 97 aa8.91□□□□□ -0.98
VPS16-202ENST00000380445 NDUFA1O15239 70 aa8.9□□□□□ -0.98
VPS16-202ENST00000380445 X6R8D5 127 aa8.9□□□□□ -0.98
VPS16-202ENST00000380445 TRBV6-8A0A0A6YYG3 113 aa8.9□□□□□ -0.98
VPS16-202ENST00000380445 IGLV5-39A0A0G2JS06 123 aa8.9□□□□□ -0.98
VPS16-202ENST00000380445 CIRBPQ14011 172 aaKnown RBP8.9□□□□□ -0.98
VPS16-202ENST00000380445 LITAFQ99732 161 aa8.9□□□□□ -0.98
VPS16-202ENST00000380445 NIPBLQ6KC79 2804 aaeCLIP8.9□□□□□ -0.98
VPS16-202ENST00000380445 PRSS2P07478 247 aa8.9□□□□□ -0.99
VPS16-202ENST00000380445 FAM19A5Q7Z5A7 132 aaPredicted RBP8.9□□□□□ -0.99
VPS16-202ENST00000380445 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.9□□□□□ -0.99
VPS16-202ENST00000380445 LYRM9A8MSI8 78 aa8.89□□□□□ -0.99
VPS16-202ENST00000380445 A8MZ25 164 aa8.89□□□□□ -0.99
VPS16-202ENST00000380445 MIAQ16674 131 aa8.89□□□□□ -0.99
VPS16-202ENST00000380445 C2CD3Q4AC94 2353 aa8.87□□□□□ -0.99
VPS16-202ENST00000380445 TEX49A0A1B0GTD5 131 aa8.87□□□□□ -0.99
VPS16-202ENST00000380445 SMIM1B2RUZ4 78 aa8.87□□□□□ -0.99
VPS16-202ENST00000380445 IGHV3-33P01772 117 aa8.87□□□□□ -0.99
VPS16-202ENST00000380445 PRO0255Q9UI72 69 aa8.87□□□□□ -0.99
VPS16-202ENST00000380445 WFDC9Q8NEX5 89 aa8.87□□□□□ -0.99
VPS16-202ENST00000380445 SPATA3Q8NHX4 192 aa8.87□□□□□ -0.99
VPS16-202ENST00000380445 ADAMTSL4-AS1Q5T5F5 129 aa8.86□□□□□ -0.99
VPS16-202ENST00000380445 COPS9Q8WXC6 57 aa8.86□□□□□ -0.99
VPS16-202ENST00000380445 GYPEP15421 78 aa8.86□□□□□ -0.99
VPS16-202ENST00000380445 Q9H8V8 135 aa8.86□□□□□ -0.99
VPS16-202ENST00000380445 TEP1Q99973 2627 aaKnown RBP8.86□□□□□ -0.99
VPS16-202ENST00000380445 NSD1Q96L73 2696 aaPredicted RBP8.85□□□□□ -0.99
VPS16-202ENST00000380445 FAM222AQ5U5X8 452 aa8.85□□□□□ -0.99
VPS16-202ENST00000380445 FN1P02751 2386 aaKnown RBP8.85□□□□□ -0.99
VPS16-202ENST00000380445 J3KT08 172 aa8.85□□□□□ -0.99
VPS16-202ENST00000380445 EIF4EBP3O60516 100 aaPredicted RBP8.85□□□□□ -0.99
VPS16-202ENST00000380445 RPL13AP40429 203 aaKnown RBP8.85□□□□□ -0.99
VPS16-202ENST00000380445 DEFB135Q30KP9 77 aa8.85□□□□□ -0.99
VPS16-202ENST00000380445 F5H768 121 aa8.84□□□□□ -0.99
VPS16-202ENST00000380445 Q1RN00 199 aa8.84□□□□□ -0.99
VPS16-202ENST00000380445 C9orf153Q5TBE3 101 aa8.84□□□□□ -0.99
VPS16-202ENST00000380445 H7C2G1 150 aa8.83□□□□□ -1
VPS16-202ENST00000380445 MIFP14174 115 aa8.83□□□□□ -1
VPS16-202ENST00000380445 LINC01620Q4KN68 170 aa8.83□□□□□ -1
VPS16-202ENST00000380445 UBE2WQ96B02 151 aa8.83□□□□□ -1
VPS16-202ENST00000380445 ATXN8Q156A1 80 aa8.83□□□□□ -1
VPS16-202ENST00000380445 PRIMA1Q86XR5 153 aa8.83□□□□□ -1
VPS16-202ENST00000380445 OR13C6PQ8NH95 151 aa8.83□□□□□ -1
VPS16-202ENST00000380445 IGLV4-60A0A075B6I1 120 aa8.82□□□□□ -1
VPS16-202ENST00000380445 PAX4O43316 350 aa8.82□□□□□ -1
VPS16-202ENST00000380445 ZNF625Q96I27 306 aaPredicted RBP8.82□□□□□ -1
VPS16-202ENST00000380445 KLK5Q9Y337 293 aaPredicted RBP8.82□□□□□ -1
VPS16-202ENST00000380445 IGHV4-28A0A0C4DH34 117 aa8.81□□□□□ -1
VPS16-202ENST00000380445 TRBV30A0A0K0K1B3 111 aa8.81□□□□□ -1
VPS16-202ENST00000380445 A0A1B0GUV1 79 aa8.81□□□□□ -1
VPS16-202ENST00000380445 DAD1P61803 113 aa8.81□□□□□ -1
VPS16-202ENST00000380445 TRBV10-2A0A0K0K1G8 114 aa8.81□□□□□ -1
VPS16-202ENST00000380445 NPC2P61916 151 aa8.81□□□□□ -1
VPS16-202ENST00000380445 TRBV7-7A0A0K0K1E9 115 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms