RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 SHISA2Q6UWI4 295 aa12.85□□□□□ -0.35
TDP2-202ENST00000378198 DEFB121Q5J5C9 76 aa12.84□□□□□ -0.35
TDP2-202ENST00000378198 SNCGO76070 127 aa12.84□□□□□ -0.35
TDP2-202ENST00000378198 MYO9AB2RTY4 2548 aa12.83□□□□□ -0.36
TDP2-202ENST00000378198 ABCA12Q86UK0 2595 aa12.82□□□□□ -0.36
TDP2-202ENST00000378198 FHL2Q14192 279 aa12.82□□□□□ -0.36
TDP2-202ENST00000378198 CHD6Q8TD26 2715 aa12.82□□□□□ -0.36
TDP2-202ENST00000378198 GAGE6Q13070 117 aa12.82□□□□□ -0.36
TDP2-202ENST00000378198 COX7B2Q8TF08 81 aa12.82□□□□□ -0.36
TDP2-202ENST00000378198 AKAP9Q99996 3911 aa12.81□□□□□ -0.36
TDP2-202ENST00000378198 CENPEQ02224 2701 aa12.81□□□□□ -0.36
TDP2-202ENST00000378198 TRBV6-8A0A0A6YYG3 113 aa12.81□□□□□ -0.36
TDP2-202ENST00000378198 FAM240AA0A1B0GVK7 77 aa12.79□□□□□ -0.36
TDP2-202ENST00000378198 APCP25054 2843 aa12.79□□□□□ -0.36
TDP2-202ENST00000378198 PF4P02776 101 aa12.79□□□□□ -0.36
TDP2-202ENST00000378198 GAGE2BQ13066 116 aa12.79□□□□□ -0.36
TDP2-202ENST00000378198 MRPL23Q16540 153 aaKnown RBP12.79□□□□□ -0.36
TDP2-202ENST00000378198 GAGE2EQ4V326 116 aa12.79□□□□□ -0.36
TDP2-202ENST00000378198 GAGE2DQ9UEU5 116 aa12.79□□□□□ -0.36
TDP2-202ENST00000378198 ITPR3Q14573 2671 aa12.79□□□□□ -0.36
TDP2-202ENST00000378198 ZNF469Q96JG9 3925 aaPredicted RBP12.79□□□□□ -0.36
TDP2-202ENST00000378198 PLA2G2AP14555 144 aa12.78□□□□□ -0.36
TDP2-202ENST00000378198 HIST2H2BCQ6DN03 193 aa12.78□□□□□ -0.36
TDP2-202ENST00000378198 Q6Q795 121 aa12.78□□□□□ -0.36
TDP2-202ENST00000378198 ZFYVE26Q68DK2 2539 aa12.78□□□□□ -0.36
TDP2-202ENST00000378198 IGLV4-60A0A075B6I1 120 aa12.77□□□□□ -0.36
TDP2-202ENST00000378198 TRACP01848 142 aa12.77□□□□□ -0.36
TDP2-202ENST00000378198 CHCHD5Q9BSY4 110 aa12.77□□□□□ -0.36
TDP2-202ENST00000378198 TRAV13-2A0A0B4J235 113 aa12.77□□□□□ -0.37
TDP2-202ENST00000378198 CRLF1O75462 422 aa12.77□□□□□ -0.37
TDP2-202ENST00000378198 FAM222AQ5U5X8 452 aa12.77□□□□□ -0.37
TDP2-202ENST00000378198 C15orf53Q8NAA6 179 aa12.77□□□□□ -0.37
TDP2-202ENST00000378198 IGKV3OR2-268A0A0C4DH90 116 aa12.76□□□□□ -0.37
TDP2-202ENST00000378198 HILS1P60008 231 aa12.76□□□□□ -0.37
TDP2-202ENST00000378198 KIR2DL5BQ8NHK3 375 aa12.76□□□□□ -0.37
TDP2-202ENST00000378198 TOMM7Q9P0U1 55 aa12.76□□□□□ -0.37
TDP2-202ENST00000378198 IGHV3OR16-9A0A0B4J2B5 98 aa12.76□□□□□ -0.37
TDP2-202ENST00000378198 ANAPC13Q9BS18 74 aa12.76□□□□□ -0.37
TDP2-202ENST00000378198 MIR7-3HGQ8N6C7 128 aa12.75□□□□□ -0.37
TDP2-202ENST00000378198 A0A087WZ39 114 aa12.74□□□□□ -0.37
TDP2-202ENST00000378198 CRPP02741 224 aa12.73□□□□□ -0.37
TDP2-202ENST00000378198 RPL28P46779 137 aaKnown RBP12.73□□□□□ -0.37
TDP2-202ENST00000378198 SONP18583 2426 aaKnown RBP12.73□□□□□ -0.37
TDP2-202ENST00000378198 TLN2Q9Y4G6 2542 aa12.73□□□□□ -0.37
TDP2-202ENST00000378198 LINC00612Q8N6U2 182 aa12.73□□□□□ -0.37
TDP2-202ENST00000378198 SND1-IT1Q9HBX3 110 aa12.73□□□□□ -0.37
TDP2-202ENST00000378198 TRAV26-1A0A087WT03 109 aa12.72□□□□□ -0.37
TDP2-202ENST00000378198 EPG5Q9HCE0 2579 aa12.72□□□□□ -0.37
TDP2-202ENST00000378198 IBA57-AS1B1ANH7 110 aa12.71□□□□□ -0.37
TDP2-202ENST00000378198 LINC00158P58513 81 aa12.71□□□□□ -0.37
TDP2-202ENST00000378198 ACYP1P07311 99 aa12.71□□□□□ -0.38
TDP2-202ENST00000378198 DEFB130BP0DP73 79 aa12.71□□□□□ -0.38
TDP2-202ENST00000378198 DEFB130AP0DP74 79 aa12.71□□□□□ -0.38
TDP2-202ENST00000378198 LINC00959A0A1B0GUT2 108 aa12.7□□□□□ -0.38
TDP2-202ENST00000378198 BAALC-AS2P0C853 105 aa12.69□□□□□ -0.38
TDP2-202ENST00000378198 TTC32Q5I0X7 151 aa12.69□□□□□ -0.38
TDP2-202ENST00000378198 LINC00337Q8N6G1 96 aa12.69□□□□□ -0.38
TDP2-202ENST00000378198 IGKV2-28A0A075B6P5 120 aa12.69□□□□□ -0.38
TDP2-202ENST00000378198 IGKV2D-28P01615 120 aa12.69□□□□□ -0.38
TDP2-202ENST00000378198 FAM218AQ96MZ4 157 aa12.69□□□□□ -0.38
TDP2-202ENST00000378198 NDUFV3P56181 108 aaKnown RBP12.68□□□□□ -0.38
TDP2-202ENST00000378198 C5orf38Q86SI9 138 aa12.68□□□□□ -0.38
TDP2-202ENST00000378198 NOTCH3Q9UM47 2321 aa12.68□□□□□ -0.38
TDP2-202ENST00000378198 GYPEP15421 78 aa12.68□□□□□ -0.38
TDP2-202ENST00000378198 A0A1B0GUV1 79 aa12.67□□□□□ -0.38
TDP2-202ENST00000378198 SMIM9A6NGZ8 99 aa12.67□□□□□ -0.38
TDP2-202ENST00000378198 CCL18P55774 89 aa12.67□□□□□ -0.38
TDP2-202ENST00000378198 FLNAP21333 2647 aaKnown RBP12.67□□□□□ -0.38
TDP2-202ENST00000378198 LINC00482Q8N8I6 264 aa12.66□□□□□ -0.38
TDP2-202ENST00000378198 NHLRC4P0CG21 123 aaPredicted RBP12.66□□□□□ -0.38
TDP2-202ENST00000378198 SS18Q15532 418 aa12.66□□□□□ -0.38
TDP2-202ENST00000378198 KRTAP10-3P60369 221 aa12.65□□□□□ -0.38
TDP2-202ENST00000378198 X6R8D5 127 aa12.65□□□□□ -0.38
TDP2-202ENST00000378198 PRO0255Q9UI72 69 aa12.65□□□□□ -0.39
TDP2-202ENST00000378198 SETXQ7Z333 2677 aaKnown RBP12.64□□□□□ -0.39
TDP2-202ENST00000378198 PFN2P35080 140 aa12.64□□□□□ -0.39
TDP2-202ENST00000378198 C6orf226Q5I0X4 101 aa12.64□□□□□ -0.39
TDP2-202ENST00000378198 SMIM11BQ8TCY0 68 aa12.64□□□□□ -0.39
TDP2-202ENST00000378198 CUBNO60494 3623 aa12.64□□□□□ -0.39
TDP2-202ENST00000378198 H0YGX0 51 aa12.63□□□□□ -0.39
TDP2-202ENST00000378198 NF1P21359 2839 aa12.63□□□□□ -0.39
TDP2-202ENST00000378198 LINC01561Q8N1V8 128 aa12.63□□□□□ -0.39
TDP2-202ENST00000378198 C22orf24Q9Y442 160 aa12.63□□□□□ -0.39
TDP2-202ENST00000378198 TRBV7-7A0A0K0K1E9 115 aa12.62□□□□□ -0.39
TDP2-202ENST00000378198 PDZD2O15018 2839 aa12.62□□□□□ -0.39
TDP2-202ENST00000378198 MALP21145 153 aa12.61□□□□□ -0.39
TDP2-202ENST00000378198 Q8IZM0 81 aa12.61□□□□□ -0.39
TDP2-202ENST00000378198 INAFM2P0DMQ5 153 aa12.61□□□□□ -0.39
TDP2-202ENST00000378198 XCL1P47992 114 aa12.61□□□□□ -0.39
TDP2-202ENST00000378198 Q9HAA7 133 aa12.61□□□□□ -0.39
TDP2-202ENST00000378198 LYRM9A8MSI8 78 aa12.6□□□□□ -0.39
TDP2-202ENST00000378198 PAX4O43316 350 aa12.6□□□□□ -0.39
TDP2-202ENST00000378198 DNAL4O96015 105 aa12.6□□□□□ -0.39
TDP2-202ENST00000378198 ANK3Q12955 4377 aaKnown RBP12.59□□□□□ -0.39
TDP2-202ENST00000378198 NBPF19A0A087WUL8 3843 aa12.59□□□□□ -0.39
TDP2-202ENST00000378198 J3QKU1 62 aa12.58□□□□□ -0.4
TDP2-202ENST00000378198 IMUPQ9GZP8 106 aa12.58□□□□□ -0.4
TDP2-202ENST00000378198 C11orf68Q9H3H3 251 aaKnown RBP12.57□□□□□ -0.4
TDP2-202ENST00000378198 CCDC168Q8NDH2 2452 aa12.57□□□□□ -0.4
TDP2-202ENST00000378198 JMJD1CQ15652 2540 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms