RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 MPV17L2Q567V2 206 aa7.62□□□□□ -1.19
PDPN-202ENST00000376057 CDKN2A-AS1Q9UH64 79 aa7.62□□□□□ -1.19
PDPN-202ENST00000376057 LINC00959A0A1B0GUT2 108 aa7.62□□□□□ -1.19
PDPN-202ENST00000376057 IGHV3-30-3P0DP02 117 aa7.62□□□□□ -1.19
PDPN-202ENST00000376057 SPANXB1Q9NS25 103 aaPredicted RBP7.62□□□□□ -1.19
PDPN-202ENST00000376057 LGALS3P17931 250 aaKnown RBP7.61□□□□□ -1.19
PDPN-202ENST00000376057 PRR34Q9NV39 138 aa7.61□□□□□ -1.19
PDPN-202ENST00000376057 IGHV3OR16-9A0A0B4J2B5 98 aa7.61□□□□□ -1.19
PDPN-202ENST00000376057 ZNF815PA8K554 130 aa7.61□□□□□ -1.19
PDPN-202ENST00000376057 TSPEAR-AS2P59090 65 aa7.61□□□□□ -1.19
PDPN-202ENST00000376057 BVES-AS1Q5T3Y7 98 aa7.61□□□□□ -1.19
PDPN-202ENST00000376057 ZFAND6Q6FIF0 208 aa7.61□□□□□ -1.19
PDPN-202ENST00000376057 TRAV13-1A0A0B4J241 112 aa7.6□□□□□ -1.19
PDPN-202ENST00000376057 TMEM262E9PQX1 116 aa7.6□□□□□ -1.19
PDPN-202ENST00000376057 SS18Q15532 418 aa7.6□□□□□ -1.19
PDPN-202ENST00000376057 TM2D2Q9BX73 214 aa7.6□□□□□ -1.19
PDPN-202ENST00000376057 A0A087WZ39 114 aa7.6□□□□□ -1.19
PDPN-202ENST00000376057 SMIM1B2RUZ4 78 aa7.6□□□□□ -1.19
PDPN-202ENST00000376057 TP73-AS1Q9UF72 201 aa7.6□□□□□ -1.19
PDPN-202ENST00000376057 TTTY13Q9BZ97 58 aa7.6□□□□□ -1.19
PDPN-202ENST00000376057 TIMM17BO60830 172 aa7.59□□□□□ -1.19
PDPN-202ENST00000376057 TCTAP57738 103 aa7.59□□□□□ -1.19
PDPN-202ENST00000376057 SFTA2Q6UW10 78 aa7.59□□□□□ -1.19
PDPN-202ENST00000376057 COX11Q9Y6N1 276 aa7.59□□□□□ -1.19
PDPN-202ENST00000376057 NBEAL1Q6ZS30 2694 aa7.58□□□□□ -1.2
PDPN-202ENST00000376057 NDUFA1O15239 70 aa7.58□□□□□ -1.2
PDPN-202ENST00000376057 ESRGQ1W209 222 aa7.58□□□□□ -1.2
PDPN-202ENST00000376057 Q6ZVH6 145 aa7.58□□□□□ -1.2
PDPN-202ENST00000376057 PPDPFQ9H3Y8 114 aa7.58□□□□□ -1.2
PDPN-202ENST00000376057 K7ERU9 68 aa7.58□□□□□ -1.2
PDPN-202ENST00000376057 TRAV8-4A0A0B4J246 113 aa7.57□□□□□ -1.2
PDPN-202ENST00000376057 SPINK8P0C7L1 97 aa7.57□□□□□ -1.2
PDPN-202ENST00000376057 REG3AQ06141 175 aa7.57□□□□□ -1.2
PDPN-202ENST00000376057 LINC01556Q5JQF7 62 aa7.57□□□□□ -1.2
PDPN-202ENST00000376057 CD164L2Q6UWJ8 174 aa7.57□□□□□ -1.2
PDPN-202ENST00000376057 DNAH9Q9NYC9 4486 aa7.57□□□□□ -1.2
PDPN-202ENST00000376057 HINT1P49773 126 aaPredicted RBP7.57□□□□□ -1.2
PDPN-202ENST00000376057 CEND1Q8N111 149 aa7.57□□□□□ -1.2
PDPN-202ENST00000376057 UPK3BQ9BT76 320 aa7.57□□□□□ -1.2
PDPN-202ENST00000376057 TRAV8-3A0A0A6YYJ7 113 aa7.56□□□□□ -1.2
PDPN-202ENST00000376057 HERV-K104P63124 156 aa7.56□□□□□ -1.2
PDPN-202ENST00000376057 LINC00269Q8N2A0 174 aa7.56□□□□□ -1.2
PDPN-202ENST00000376057 A0A0J9YXY3 114 aa7.56□□□□□ -1.2
PDPN-202ENST00000376057 ANGP03950 147 aaKnown RBP7.56□□□□□ -1.2
PDPN-202ENST00000376057 DNAH10OSP0CZ25 163 aa7.56□□□□□ -1.2
PDPN-202ENST00000376057 NDUFA12Q9UI09 145 aa7.56□□□□□ -1.2
PDPN-202ENST00000376057 SCGB1D4Q6XE38 83 aa7.55□□□□□ -1.2
PDPN-202ENST00000376057 C10orf126Q8N4M7 172 aa7.55□□□□□ -1.2
PDPN-202ENST00000376057 ZNF625Q96I27 306 aaPredicted RBP7.55□□□□□ -1.2
PDPN-202ENST00000376057 A6NDN8 102 aa7.55□□□□□ -1.2
PDPN-202ENST00000376057 SPANXDQ9BXN6 97 aa7.55□□□□□ -1.2
PDPN-202ENST00000376057 SPANXCQ9NY87 97 aa7.55□□□□□ -1.2
PDPN-202ENST00000376057 DYNC2H1Q8NCM8 4307 aaKnown RBP7.54□□□□□ -1.2
PDPN-202ENST00000376057 A0A1B0GV72 72 aa7.54□□□□□ -1.2
PDPN-202ENST00000376057 VAMP3Q15836 100 aa7.54□□□□□ -1.2
PDPN-202ENST00000376057 TENM3Q9P273 2699 aa7.54□□□□□ -1.2
PDPN-202ENST00000376057 NOTCH1P46531 2555 aa7.54□□□□□ -1.2
PDPN-202ENST00000376057 A0A1B0GWB2 263 aa7.54□□□□□ -1.2
PDPN-202ENST00000376057 MIAQ16674 131 aa7.54□□□□□ -1.2
PDPN-202ENST00000376057 ENHOQ6UWT2 76 aa7.54□□□□□ -1.2
PDPN-202ENST00000376057 CHCHD10Q8WYQ3 142 aaPredicted RBP7.54□□□□□ -1.2
PDPN-202ENST00000376057 HIST1H4GQ99525 98 aa7.54□□□□□ -1.2
PDPN-202ENST00000376057 LITAFQ99732 161 aa7.54□□□□□ -1.2
PDPN-202ENST00000376057 COX7B2Q8TF08 81 aa7.53□□□□□ -1.2
PDPN-202ENST00000376057 IGHV3-64A0A075B6Q5 118 aa7.53□□□□□ -1.2
PDPN-202ENST00000376057 FOXI1Q12951 378 aa7.53□□□□□ -1.2
PDPN-202ENST00000376057 WFDC10BQ8IUB3 73 aa7.53□□□□□ -1.2
PDPN-202ENST00000376057 Q8IZM0 81 aa7.53□□□□□ -1.2
PDPN-202ENST00000376057 IGHV3-30P01768 117 aa7.52□□□□□ -1.21
PDPN-202ENST00000376057 IGHV3-30-5P0DP03 117 aa7.52□□□□□ -1.21
PDPN-202ENST00000376057 MGAM2Q2M2H8 2515 aa7.52□□□□□ -1.21
PDPN-202ENST00000376057 COX7A2LO14548 114 aa7.52□□□□□ -1.21
PDPN-202ENST00000376057 CCL18P55774 89 aa7.52□□□□□ -1.21
PDPN-202ENST00000376057 KLK5Q9Y337 293 aaPredicted RBP7.52□□□□□ -1.21
PDPN-202ENST00000376057 IFITM1P13164 125 aa7.51□□□□□ -1.21
PDPN-202ENST00000376057 Q8N3U1 123 aa7.51□□□□□ -1.21
PDPN-202ENST00000376057 LINC00588Q9Y4M8 146 aa7.51□□□□□ -1.21
PDPN-202ENST00000376057 CXCL5P42830 114 aa7.51□□□□□ -1.21
PDPN-202ENST00000376057 CIRBPQ14011 172 aaKnown RBP7.51□□□□□ -1.21
PDPN-202ENST00000376057 KLK12Q9UKR0 248 aa7.51□□□□□ -1.21
PDPN-202ENST00000376057 NUPR2A6NF83 97 aa7.5□□□□□ -1.21
PDPN-202ENST00000376057 GCSHP23434 173 aa7.5□□□□□ -1.21
PDPN-202ENST00000376057 XCL1P47992 114 aa7.5□□□□□ -1.21
PDPN-202ENST00000376057 SRSF9Q13242 221 aaKnown RBP eCLIP7.5□□□□□ -1.21
PDPN-202ENST00000376057 KRTAP26-1Q6PEX3 210 aa7.5□□□□□ -1.21
PDPN-202ENST00000376057 COPS9Q8WXC6 57 aa7.5□□□□□ -1.21
PDPN-202ENST00000376057 APLNQ9ULZ1 77 aa7.5□□□□□ -1.21
PDPN-202ENST00000376057 IGKV3OR2-268A0A0C4DH90 116 aa7.5□□□□□ -1.21
PDPN-202ENST00000376057 CRPP02741 224 aa7.5□□□□□ -1.21
PDPN-202ENST00000376057 FXYD2P54710 66 aa7.5□□□□□ -1.21
PDPN-202ENST00000376057 Q9H8V8 135 aa7.5□□□□□ -1.21
PDPN-202ENST00000376057 TAX1BP3O14907 124 aa7.49□□□□□ -1.21
PDPN-202ENST00000376057 APOMO95445 188 aa7.49□□□□□ -1.21
PDPN-202ENST00000376057 IGLL5B9A064 214 aa7.49□□□□□ -1.21
PDPN-202ENST00000376057 F8WDY8 70 aa7.49□□□□□ -1.21
PDPN-202ENST00000376057 SMIM13P0DJ93 91 aa7.49□□□□□ -1.21
PDPN-202ENST00000376057 C5orf38Q86SI9 138 aa7.49□□□□□ -1.21
PDPN-202ENST00000376057 IBA57-AS1B1ANH7 110 aa7.48□□□□□ -1.21
PDPN-202ENST00000376057 IGHV3-33P01772 117 aa7.48□□□□□ -1.21
PDPN-202ENST00000376057 RPL24P83731 157 aaKnown RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms