RNA–Protein interactions for RNA: ENST00000373571.5

HDAC8-206, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-206ENST00000373571 RPL13AP40429 203 aaKnown RBP11.82□□□□□ -0.52
HDAC8-206ENST00000373571 JMJD1CQ15652 2540 aa11.82□□□□□ -0.52
HDAC8-206ENST00000373571 A0A0U1RRA0 63 aa11.81□□□□□ -0.52
HDAC8-206ENST00000373571 COX6CP09669 75 aa11.81□□□□□ -0.52
HDAC8-206ENST00000373571 LINC00308Q8TCZ7 52 aa11.81□□□□□ -0.52
HDAC8-206ENST00000373571 H7C423 109 aa11.81□□□□□ -0.52
HDAC8-206ENST00000373571 NOTCH3Q9UM47 2321 aa11.8□□□□□ -0.52
HDAC8-206ENST00000373571 FHL2Q14192 279 aa11.8□□□□□ -0.52
HDAC8-206ENST00000373571 PRIMA1Q86XR5 153 aa11.8□□□□□ -0.52
HDAC8-206ENST00000373571 SMR3AQ99954 134 aa11.8□□□□□ -0.52
HDAC8-206ENST00000373571 MTORP42345 2549 aa11.79□□□□□ -0.52
HDAC8-206ENST00000373571 GAGE6Q13070 117 aa11.79□□□□□ -0.52
HDAC8-206ENST00000373571 MEIG1Q5JSS6 88 aa11.79□□□□□ -0.52
HDAC8-206ENST00000373571 TRBV10-2A0A0K0K1G8 114 aa11.78□□□□□ -0.52
HDAC8-206ENST00000373571 PF4P02776 101 aa11.78□□□□□ -0.52
HDAC8-206ENST00000373571 KRTAP10-3P60369 221 aa11.78□□□□□ -0.52
HDAC8-206ENST00000373571 NTN5Q8WTR8 489 aaPredicted RBP11.77□□□□□ -0.52
HDAC8-206ENST00000373571 COPS9Q8WXC6 57 aa11.77□□□□□ -0.52
HDAC8-206ENST00000373571 CLEC2BQ92478 149 aa11.77□□□□□ -0.52
HDAC8-206ENST00000373571 HERV-K104P63124 156 aa11.77□□□□□ -0.53
HDAC8-206ENST00000373571 SOSTDC1Q6X4U4 206 aa11.77□□□□□ -0.53
HDAC8-206ENST00000373571 LINC01600Q96MT4 127 aa11.77□□□□□ -0.53
HDAC8-206ENST00000373571 ITPR2Q14571 2701 aa11.76□□□□□ -0.53
HDAC8-206ENST00000373571 TRBV6-8A0A0A6YYG3 113 aa11.76□□□□□ -0.53
HDAC8-206ENST00000373571 LINC00482Q8N8I6 264 aa11.75□□□□□ -0.53
HDAC8-206ENST00000373571 IGLV4-60A0A075B6I1 120 aa11.75□□□□□ -0.53
HDAC8-206ENST00000373571 IGKV3OR2-268A0A0C4DH90 116 aa11.75□□□□□ -0.53
HDAC8-206ENST00000373571 CRLF1O75462 422 aa11.75□□□□□ -0.53
HDAC8-206ENST00000373571 DEFB130BP0DP73 79 aa11.75□□□□□ -0.53
HDAC8-206ENST00000373571 DEFB130AP0DP74 79 aa11.75□□□□□ -0.53
HDAC8-206ENST00000373571 CHCHD5Q9BSY4 110 aa11.75□□□□□ -0.53
HDAC8-206ENST00000373571 LST1O00453 97 aa11.74□□□□□ -0.53
HDAC8-206ENST00000373571 XGP55808 180 aa11.74□□□□□ -0.53
HDAC8-206ENST00000373571 C2orf82Q6UX34 121 aa11.74□□□□□ -0.53
HDAC8-206ENST00000373571 MT-ATP8P03928 68 aa11.73□□□□□ -0.53
HDAC8-206ENST00000373571 KIR2DL5BQ8NHK3 375 aa11.73□□□□□ -0.53
HDAC8-206ENST00000373571 TMEM262E9PQX1 116 aa11.72□□□□□ -0.53
HDAC8-206ENST00000373571 COX7B2Q8TF08 81 aa11.72□□□□□ -0.53
HDAC8-206ENST00000373571 C2CD3Q4AC94 2353 aa11.72□□□□□ -0.53
HDAC8-206ENST00000373571 TEX49A0A1B0GTD5 131 aa11.72□□□□□ -0.53
HDAC8-206ENST00000373571 H3BT86 120 aa11.71□□□□□ -0.53
HDAC8-206ENST00000373571 UBE2WQ96B02 151 aa11.71□□□□□ -0.53
HDAC8-206ENST00000373571 LINC00612Q8N6U2 182 aa11.71□□□□□ -0.54
HDAC8-206ENST00000373571 TOMM7Q9P0U1 55 aa11.71□□□□□ -0.54
HDAC8-206ENST00000373571 LY6G6DO95868 133 aa11.69□□□□□ -0.54
HDAC8-206ENST00000373571 UNC79Q9P2D8 2635 aa11.69□□□□□ -0.54
HDAC8-206ENST00000373571 GYPEP15421 78 aa11.69□□□□□ -0.54
HDAC8-206ENST00000373571 IGHV3OR16-9A0A0B4J2B5 98 aa11.68□□□□□ -0.54
HDAC8-206ENST00000373571 PPDPFQ9H3Y8 114 aa11.68□□□□□ -0.54
HDAC8-206ENST00000373571 X6R8D5 127 aa11.68□□□□□ -0.54
HDAC8-206ENST00000373571 HIVEP2P31629 2446 aa11.68□□□□□ -0.54
HDAC8-206ENST00000373571 COX7A2LO14548 114 aa11.68□□□□□ -0.54
HDAC8-206ENST00000373571 SHISA2Q6UWI4 295 aa11.68□□□□□ -0.54
HDAC8-206ENST00000373571 SMIM9A6NGZ8 99 aa11.66□□□□□ -0.54
HDAC8-206ENST00000373571 MIR7-3HGQ8N6C7 128 aa11.66□□□□□ -0.54
HDAC8-206ENST00000373571 HELZ2Q9BYK8 2649 aaKnown RBP11.66□□□□□ -0.54
HDAC8-206ENST00000373571 A0A087WZ39 114 aa11.65□□□□□ -0.54
HDAC8-206ENST00000373571 SPATA3Q8NHX4 192 aa11.65□□□□□ -0.54
HDAC8-206ENST00000373571 KMT2BQ9UMN6 2715 aaPredicted RBP11.65□□□□□ -0.54
HDAC8-206ENST00000373571 TRAV8-4A0A0B4J246 113 aa11.65□□□□□ -0.55
HDAC8-206ENST00000373571 LINC00959A0A1B0GUT2 108 aa11.65□□□□□ -0.55
HDAC8-206ENST00000373571 C5orf38Q86SI9 138 aa11.65□□□□□ -0.55
HDAC8-206ENST00000373571 FASNP49327 2511 aaKnown RBP11.64□□□□□ -0.55
HDAC8-206ENST00000373571 C9orf66Q5T8R8 295 aa11.63□□□□□ -0.55
HDAC8-206ENST00000373571 PRO0255Q9UI72 69 aa11.63□□□□□ -0.55
HDAC8-206ENST00000373571 LINC00158P58513 81 aa11.63□□□□□ -0.55
HDAC8-206ENST00000373571 FAM222AQ5U5X8 452 aa11.63□□□□□ -0.55
HDAC8-206ENST00000373571 A0A1B0GV72 72 aa11.62□□□□□ -0.55
HDAC8-206ENST00000373571 A0A096LPF7 62 aa11.62□□□□□ -0.55
HDAC8-206ENST00000373571 TRAV13-2A0A0B4J235 113 aa11.62□□□□□ -0.55
HDAC8-206ENST00000373571 SND1-IT1Q9HBX3 110 aa11.62□□□□□ -0.55
HDAC8-206ENST00000373571 A0A1B0GUV1 79 aa11.61□□□□□ -0.55
HDAC8-206ENST00000373571 CRPP02741 224 aa11.61□□□□□ -0.55
HDAC8-206ENST00000373571 CKS1BP61024 79 aa11.61□□□□□ -0.55
HDAC8-206ENST00000373571 IBA57-AS1B1ANH7 110 aa11.6□□□□□ -0.55
HDAC8-206ENST00000373571 INAFM1C9JVW0 142 aa11.6□□□□□ -0.55
HDAC8-206ENST00000373571 LYRM9A8MSI8 78 aa11.6□□□□□ -0.55
HDAC8-206ENST00000373571 XCL1P47992 114 aa11.6□□□□□ -0.55
HDAC8-206ENST00000373571 DEFB135Q30KP9 77 aa11.6□□□□□ -0.55
HDAC8-206ENST00000373571 LINC00337Q8N6G1 96 aa11.6□□□□□ -0.55
HDAC8-206ENST00000373571 IGKV2-28A0A075B6P5 120 aa11.59□□□□□ -0.55
HDAC8-206ENST00000373571 PAX4O43316 350 aa11.59□□□□□ -0.55
HDAC8-206ENST00000373571 IGKV2D-28P01615 120 aa11.59□□□□□ -0.55
HDAC8-206ENST00000373571 SS18Q15532 418 aa11.59□□□□□ -0.55
HDAC8-206ENST00000373571 DEFB121Q5J5C9 76 aa11.59□□□□□ -0.55
HDAC8-206ENST00000373571 CLPSL2Q6UWE3 100 aa11.59□□□□□ -0.55
HDAC8-206ENST00000373571 DEFB4AO15263 64 aa11.58□□□□□ -0.56
HDAC8-206ENST00000373571 TRACP01848 142 aa11.58□□□□□ -0.56
HDAC8-206ENST00000373571 PFN2P35080 140 aa11.58□□□□□ -0.56
HDAC8-206ENST00000373571 CCL18P55774 89 aa11.58□□□□□ -0.56
HDAC8-206ENST00000373571 C11orf68Q9H3H3 251 aaKnown RBP11.58□□□□□ -0.56
HDAC8-206ENST00000373571 FN1P02751 2386 aaKnown RBP11.58□□□□□ -0.56
HDAC8-206ENST00000373571 SNCGO76070 127 aa11.57□□□□□ -0.56
HDAC8-206ENST00000373571 RPL28P46779 137 aaKnown RBP11.57□□□□□ -0.56
HDAC8-206ENST00000373571 C6orf226Q5I0X4 101 aa11.57□□□□□ -0.56
HDAC8-206ENST00000373571 CITED1Q99966 193 aa11.57□□□□□ -0.56
HDAC8-206ENST00000373571 FAM218AQ96MZ4 157 aa11.57□□□□□ -0.56
HDAC8-206ENST00000373571 APOC4P55056 127 aa11.56□□□□□ -0.56
HDAC8-206ENST00000373571 GCN1Q92616 2671 aaKnown RBP11.55□□□□□ -0.56
HDAC8-206ENST00000373571 IGHV4-28A0A0C4DH34 117 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms