RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 H7C2G1 150 aa7.58□□□□□ -1.2
CCDC172-201ENST00000333254 RPL35AP18077 110 aaKnown RBP7.58□□□□□ -1.2
CCDC172-201ENST00000333254 LINC00482Q8N8I6 264 aa7.58□□□□□ -1.2
CCDC172-201ENST00000333254 WFDC10AQ9H1F0 79 aa7.58□□□□□ -1.2
CCDC172-201ENST00000333254 TRBV6-8A0A0A6YYG3 113 aa7.57□□□□□ -1.2
CCDC172-201ENST00000333254 TRAV13-1A0A0B4J241 112 aa7.57□□□□□ -1.2
CCDC172-201ENST00000333254 FAM222AQ5U5X8 452 aa7.57□□□□□ -1.2
CCDC172-201ENST00000333254 PF4P02776 101 aa7.57□□□□□ -1.2
CCDC172-201ENST00000333254 PRIMA1Q86XR5 153 aa7.57□□□□□ -1.2
CCDC172-201ENST00000333254 SHISA2Q6UWI4 295 aa7.56□□□□□ -1.2
CCDC172-201ENST00000333254 SETXQ7Z333 2677 aaKnown RBP7.55□□□□□ -1.2
CCDC172-201ENST00000333254 DEFB121Q5J5C9 76 aa7.55□□□□□ -1.2
CCDC172-201ENST00000333254 HIST2H2BCQ6DN03 193 aa7.55□□□□□ -1.2
CCDC172-201ENST00000333254 LINC01561Q8N1V8 128 aa7.55□□□□□ -1.2
CCDC172-201ENST00000333254 CCDC168Q8NDH2 2452 aa7.55□□□□□ -1.2
CCDC172-201ENST00000333254 IGHV3OR16-9A0A0B4J2B5 98 aa7.54□□□□□ -1.2
CCDC172-201ENST00000333254 LOC100131303A0A0U1RQF7 123 aa7.54□□□□□ -1.2
CCDC172-201ENST00000333254 COX7A2LO14548 114 aa7.54□□□□□ -1.2
CCDC172-201ENST00000333254 MEIG1Q5JSS6 88 aa7.54□□□□□ -1.2
CCDC172-201ENST00000333254 SOSTDC1Q6X4U4 206 aa7.54□□□□□ -1.2
CCDC172-201ENST00000333254 COX7B2Q8TF08 81 aa7.54□□□□□ -1.2
CCDC172-201ENST00000333254 NTN5Q8WTR8 489 aaPredicted RBP7.54□□□□□ -1.2
CCDC172-201ENST00000333254 A0A087WZ39 114 aa7.54□□□□□ -1.2
CCDC172-201ENST00000333254 A0A1B0GUV1 79 aa7.54□□□□□ -1.2
CCDC172-201ENST00000333254 C2orf82Q6UX34 121 aa7.54□□□□□ -1.2
CCDC172-201ENST00000333254 UBE2WQ96B02 151 aa7.54□□□□□ -1.2
CCDC172-201ENST00000333254 TENM4Q6N022 2769 aa7.53□□□□□ -1.2
CCDC172-201ENST00000333254 TRAV26-1A0A087WT03 109 aa7.53□□□□□ -1.2
CCDC172-201ENST00000333254 FAM240AA0A1B0GVK7 77 aa7.53□□□□□ -1.2
CCDC172-201ENST00000333254 LYRM9A8MSI8 78 aa7.53□□□□□ -1.2
CCDC172-201ENST00000333254 KRTAP10-3P60369 221 aa7.53□□□□□ -1.2
CCDC172-201ENST00000333254 NPC2P61916 151 aa7.53□□□□□ -1.2
CCDC172-201ENST00000333254 DAND5Q8N907 189 aa7.53□□□□□ -1.2
CCDC172-201ENST00000333254 NOTCH3Q9UM47 2321 aa7.53□□□□□ -1.2
CCDC172-201ENST00000333254 KMT2BQ9UMN6 2715 aaPredicted RBP7.52□□□□□ -1.21
CCDC172-201ENST00000333254 TRAV13-2A0A0B4J235 113 aa7.52□□□□□ -1.21
CCDC172-201ENST00000333254 LCE2BO14633 110 aa7.52□□□□□ -1.21
CCDC172-201ENST00000333254 TRACP01848 142 aa7.52□□□□□ -1.21
CCDC172-201ENST00000333254 XGP55808 180 aa7.52□□□□□ -1.21
CCDC172-201ENST00000333254 GAGE6Q13070 117 aa7.52□□□□□ -1.21
CCDC172-201ENST00000333254 MRPL23Q16540 153 aaKnown RBP7.52□□□□□ -1.21
CCDC172-201ENST00000333254 C9orf66Q5T8R8 295 aa7.52□□□□□ -1.21
CCDC172-201ENST00000333254 X6R8D5 127 aa7.52□□□□□ -1.21
CCDC172-201ENST00000333254 NF1P21359 2839 aa7.52□□□□□ -1.21
CCDC172-201ENST00000333254 ZNF469Q96JG9 3925 aaPredicted RBP7.51□□□□□ -1.21
CCDC172-201ENST00000333254 IBA57-AS1B1ANH7 110 aa7.51□□□□□ -1.21
CCDC172-201ENST00000333254 CHCHD5Q9BSY4 110 aa7.51□□□□□ -1.21
CCDC172-201ENST00000333254 ANK3Q12955 4377 aaKnown RBP7.51□□□□□ -1.21
CCDC172-201ENST00000333254 IGLV4-60A0A075B6I1 120 aa7.51□□□□□ -1.21
CCDC172-201ENST00000333254 A0A1B0GV72 72 aa7.51□□□□□ -1.21
CCDC172-201ENST00000333254 CRLF1O75462 422 aa7.51□□□□□ -1.21
CCDC172-201ENST00000333254 CLEC2BQ92478 149 aa7.51□□□□□ -1.21
CCDC172-201ENST00000333254 PRO0255Q9UI72 69 aa7.51□□□□□ -1.21
CCDC172-201ENST00000333254 JMJD1CQ15652 2540 aa7.5□□□□□ -1.21
CCDC172-201ENST00000333254 MT-ATP8P03928 68 aa7.5□□□□□ -1.21
CCDC172-201ENST00000333254 RPL28P46779 137 aaKnown RBP7.5□□□□□ -1.21
CCDC172-201ENST00000333254 ACANP16112 2415 aa7.49□□□□□ -1.21
CCDC172-201ENST00000333254 LINC00959A0A1B0GUT2 108 aa7.49□□□□□ -1.21
CCDC172-201ENST00000333254 Q6Q795 121 aa7.49□□□□□ -1.21
CCDC172-201ENST00000333254 CITED1Q99966 193 aa7.49□□□□□ -1.21
CCDC172-201ENST00000333254 TRAV8-4A0A0B4J246 113 aa7.48□□□□□ -1.21
CCDC172-201ENST00000333254 TEX49A0A1B0GTD5 131 aa7.48□□□□□ -1.21
CCDC172-201ENST00000333254 GYPEP15421 78 aa7.48□□□□□ -1.21
CCDC172-201ENST00000333254 UNC79Q9P2D8 2635 aa7.48□□□□□ -1.21
CCDC172-201ENST00000333254 MTORP42345 2549 aa7.48□□□□□ -1.21
CCDC172-201ENST00000333254 LY6G6DO95868 133 aa7.47□□□□□ -1.21
CCDC172-201ENST00000333254 CRPP02741 224 aa7.47□□□□□ -1.21
CCDC172-201ENST00000333254 SS18Q15532 418 aa7.47□□□□□ -1.21
CCDC172-201ENST00000333254 MIR7-3HGQ8N6C7 128 aa7.47□□□□□ -1.21
CCDC172-201ENST00000333254 HIVEP2P31629 2446 aa7.47□□□□□ -1.21
CCDC172-201ENST00000333254 APOC4P55056 127 aa7.47□□□□□ -1.21
CCDC172-201ENST00000333254 Q8IZM0 81 aa7.47□□□□□ -1.21
CCDC172-201ENST00000333254 ITPR2Q14571 2701 aa7.46□□□□□ -1.21
CCDC172-201ENST00000333254 A0A0U1RRA0 63 aa7.46□□□□□ -1.22
CCDC172-201ENST00000333254 ACYP1P07311 99 aa7.46□□□□□ -1.22
CCDC172-201ENST00000333254 DEFB130BP0DP73 79 aa7.46□□□□□ -1.22
CCDC172-201ENST00000333254 DEFB130AP0DP74 79 aa7.46□□□□□ -1.22
CCDC172-201ENST00000333254 SND1-IT1Q9HBX3 110 aa7.46□□□□□ -1.22
CCDC172-201ENST00000333254 WIPF1O43516 503 aa7.45□□□□□ -1.22
CCDC172-201ENST00000333254 IGKV2-28A0A075B6P5 120 aa7.44□□□□□ -1.22
CCDC172-201ENST00000333254 H0YGX0 51 aa7.44□□□□□ -1.22
CCDC172-201ENST00000333254 IGKV2D-28P01615 120 aa7.44□□□□□ -1.22
CCDC172-201ENST00000333254 CXCL5P42830 114 aa7.44□□□□□ -1.22
CCDC172-201ENST00000333254 CCL18P55774 89 aa7.44□□□□□ -1.22
CCDC172-201ENST00000333254 CKS1BP61024 79 aa7.44□□□□□ -1.22
CCDC172-201ENST00000333254 TOMM7Q9P0U1 55 aa7.44□□□□□ -1.22
CCDC172-201ENST00000333254 SETD2Q9BYW2 2564 aaPredicted RBP7.44□□□□□ -1.22
CCDC172-201ENST00000333254 PAX4O43316 350 aa7.44□□□□□ -1.22
CCDC172-201ENST00000333254 SNCGO76070 127 aa7.44□□□□□ -1.22
CCDC172-201ENST00000333254 LINC00158P58513 81 aa7.44□□□□□ -1.22
CCDC172-201ENST00000333254 LINC00337Q8N6G1 96 aa7.44□□□□□ -1.22
CCDC172-201ENST00000333254 SMR3AQ99954 134 aa7.44□□□□□ -1.22
CCDC172-201ENST00000333254 C2CD3Q4AC94 2353 aa7.43□□□□□ -1.22
CCDC172-201ENST00000333254 NBPF19A0A087WUL8 3843 aa7.43□□□□□ -1.22
CCDC172-201ENST00000333254 MIFP14174 115 aa7.43□□□□□ -1.22
CCDC172-201ENST00000333254 COX17Q14061 63 aa7.43□□□□□ -1.22
CCDC172-201ENST00000333254 MUC7Q8TAX7 377 aa7.43□□□□□ -1.22
CCDC172-201ENST00000333254 HELZ2Q9BYK8 2649 aaKnown RBP7.42□□□□□ -1.22
CCDC172-201ENST00000333254 CD164L2Q6UWJ8 174 aa7.42□□□□□ -1.22
CCDC172-201ENST00000333254 C5orf38Q86SI9 138 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms