RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 Q9H8V8 135 aa15.08■□□□□ 0
LIMS2-201ENST00000324938 NSD1Q96L73 2696 aaPredicted RBP15.07■□□□□ 0
LIMS2-201ENST00000324938 TRBV6-8A0A0A6YYG3 113 aa15.07■□□□□ 0
LIMS2-201ENST00000324938 Q1RN00 199 aa15.07■□□□□ 0
LIMS2-201ENST00000324938 X6R8D5 127 aa15.07■□□□□ 0
LIMS2-201ENST00000324938 CIRBPQ14011 172 aaKnown RBP15.06■□□□□ 0
LIMS2-201ENST00000324938 SPATA3Q8NHX4 192 aa15.06■□□□□ 0
LIMS2-201ENST00000324938 FN1P02751 2386 aaKnown RBP15.06■□□□□ 0
LIMS2-201ENST00000324938 SMIM9A6NGZ8 99 aa15.05■□□□□ 0
LIMS2-201ENST00000324938 DEFB130BP0DP73 79 aa15.05■□□□□ 0
LIMS2-201ENST00000324938 DEFB130AP0DP74 79 aa15.05■□□□□ 0
LIMS2-201ENST00000324938 NPC2P61916 151 aa15.05■□□□□ 0
LIMS2-201ENST00000324938 GAGE6Q13070 117 aa15.05■□□□□ -0
LIMS2-201ENST00000324938 TRBV30A0A0K0K1B3 111 aa15.04■□□□□ -0
LIMS2-201ENST00000324938 C21orf62-AS1Q17RA5 79 aa15.04■□□□□ -0
LIMS2-201ENST00000324938 ZNF625Q96I27 306 aaPredicted RBP15.04■□□□□ -0
LIMS2-201ENST00000324938 DAND5Q8N907 189 aa15.03■□□□□ -0
LIMS2-201ENST00000324938 TRIAP1O43715 76 aa15.01□□□□□ -0.01
LIMS2-201ENST00000324938 CHCHD5Q9BSY4 110 aa15.01□□□□□ -0.01
LIMS2-201ENST00000324938 NOTCH2Q04721 2471 aa15.01□□□□□ -0.01
LIMS2-201ENST00000324938 IGLV4-60A0A075B6I1 120 aa15.01□□□□□ -0.01
LIMS2-201ENST00000324938 FOXI1Q12951 378 aa15.01□□□□□ -0.01
LIMS2-201ENST00000324938 VWFP04275 2813 aa15□□□□□ -0.01
LIMS2-201ENST00000324938 HERV-K104P63124 156 aa15□□□□□ -0.01
LIMS2-201ENST00000324938 PRIMA1Q86XR5 153 aa15□□□□□ -0.01
LIMS2-201ENST00000324938 LINC00308Q8TCZ7 52 aa15□□□□□ -0.01
LIMS2-201ENST00000324938 ICOSQ9Y6W8 199 aa15□□□□□ -0.01
LIMS2-201ENST00000324938 TEN1Q86WV5 123 aa14.99□□□□□ -0.01
LIMS2-201ENST00000324938 ATXN8Q156A1 80 aa14.98□□□□□ -0.01
LIMS2-201ENST00000324938 M0QXV9 152 aa14.98□□□□□ -0.01
LIMS2-201ENST00000324938 GYPEP15421 78 aa14.98□□□□□ -0.01
LIMS2-201ENST00000324938 COPS9Q8WXC6 57 aa14.98□□□□□ -0.01
LIMS2-201ENST00000324938 CITED1Q99966 193 aa14.97□□□□□ -0.01
LIMS2-201ENST00000324938 C9JAW5 83 aa14.96□□□□□ -0.01
LIMS2-201ENST00000324938 SLC25A20O43772 301 aa14.96□□□□□ -0.01
LIMS2-201ENST00000324938 MEIG1Q5JSS6 88 aa14.96□□□□□ -0.01
LIMS2-201ENST00000324938 LYRM9A8MSI8 78 aa14.96□□□□□ -0.01
LIMS2-201ENST00000324938 RPL13AP40429 203 aaKnown RBP14.96□□□□□ -0.01
LIMS2-201ENST00000324938 PPDPFLQ8WWR9 84 aa14.96□□□□□ -0.01
LIMS2-201ENST00000324938 SPATA25Q9BR10 227 aa14.96□□□□□ -0.01
LIMS2-201ENST00000324938 PRO0255Q9UI72 69 aa14.96□□□□□ -0.01
LIMS2-201ENST00000324938 GAGE12HA6NDE8 117 aa14.95□□□□□ -0.02
LIMS2-201ENST00000324938 FAM222AQ5U5X8 452 aa14.95□□□□□ -0.02
LIMS2-201ENST00000324938 IGKV3OR2-268A0A0C4DH90 116 aa14.94□□□□□ -0.02
LIMS2-201ENST00000324938 A0A0U1RRA0 63 aa14.94□□□□□ -0.02
LIMS2-201ENST00000324938 LINC01620Q4KN68 170 aa14.94□□□□□ -0.02
LIMS2-201ENST00000324938 SOSTDC1Q6X4U4 206 aa14.94□□□□□ -0.02
LIMS2-201ENST00000324938 COX7B2Q8TF08 81 aa14.94□□□□□ -0.02
LIMS2-201ENST00000324938 PPDPFQ9H3Y8 114 aa14.94□□□□□ -0.02
LIMS2-201ENST00000324938 IGHV3OR16-9A0A0B4J2B5 98 aa14.93□□□□□ -0.02
LIMS2-201ENST00000324938 APOC4P55056 127 aa14.93□□□□□ -0.02
LIMS2-201ENST00000324938 DEFB135Q30KP9 77 aa14.93□□□□□ -0.02
LIMS2-201ENST00000324938 ANKRD29Q8N6D5 301 aa14.93□□□□□ -0.02
LIMS2-201ENST00000324938 TENM1Q9UKZ4 2725 aa14.93□□□□□ -0.02
LIMS2-201ENST00000324938 COX6CP09669 75 aa14.93□□□□□ -0.02
LIMS2-201ENST00000324938 CARD19Q96LW7 228 aa14.93□□□□□ -0.02
LIMS2-201ENST00000324938 LINC01600Q96MT4 127 aa14.92□□□□□ -0.02
LIMS2-201ENST00000324938 HIVEP1P15822 2718 aa14.9□□□□□ -0.02
LIMS2-201ENST00000324938 A0A087WZ39 114 aa14.9□□□□□ -0.02
LIMS2-201ENST00000324938 LINC00959A0A1B0GUT2 108 aa14.89□□□□□ -0.03
LIMS2-201ENST00000324938 A0A1B0GUV1 79 aa14.89□□□□□ -0.03
LIMS2-201ENST00000324938 PAX4O43316 350 aa14.88□□□□□ -0.03
LIMS2-201ENST00000324938 SIGMAR1Q99720 223 aa14.88□□□□□ -0.03
LIMS2-201ENST00000324938 IGHV4-28A0A0C4DH34 117 aa14.87□□□□□ -0.03
LIMS2-201ENST00000324938 TRBV10-2A0A0K0K1G8 114 aa14.87□□□□□ -0.03
LIMS2-201ENST00000324938 TOMM7Q9P0U1 55 aa14.87□□□□□ -0.03
LIMS2-201ENST00000324938 NBEAL2Q6ZNJ1 2754 aa14.87□□□□□ -0.03
LIMS2-201ENST00000324938 LST1O00453 97 aa14.86□□□□□ -0.03
LIMS2-201ENST00000324938 DEFB4AO15263 64 aa14.86□□□□□ -0.03
LIMS2-201ENST00000324938 WFDC9Q8NEX5 89 aa14.86□□□□□ -0.03
LIMS2-201ENST00000324938 TEP1Q99973 2627 aaKnown RBP14.85□□□□□ -0.03
LIMS2-201ENST00000324938 TMEM262E9PQX1 116 aa14.85□□□□□ -0.03
LIMS2-201ENST00000324938 CLEC2BQ92478 149 aa14.85□□□□□ -0.03
LIMS2-201ENST00000324938 WIPF1O43516 503 aa14.84□□□□□ -0.03
LIMS2-201ENST00000324938 A0A096LPF7 62 aa14.84□□□□□ -0.03
LIMS2-201ENST00000324938 C5orf38Q86SI9 138 aa14.84□□□□□ -0.03
LIMS2-201ENST00000324938 Q8NAQ8 132 aa14.84□□□□□ -0.03
LIMS2-201ENST00000324938 MIFP14174 115 aa14.83□□□□□ -0.04
LIMS2-201ENST00000324938 DAD1P61803 113 aa14.83□□□□□ -0.04
LIMS2-201ENST00000324938 ATRQ13535 2644 aa14.83□□□□□ -0.04
LIMS2-201ENST00000324938 SS18Q15532 418 aa14.82□□□□□ -0.04
LIMS2-201ENST00000324938 SHISA2Q6UWI4 295 aa14.82□□□□□ -0.04
LIMS2-201ENST00000324938 MIR7-3HGQ8N6C7 128 aa14.82□□□□□ -0.04
LIMS2-201ENST00000324938 CDIP1Q9H305 208 aa14.82□□□□□ -0.04
LIMS2-201ENST00000324938 CELA1Q9UNI1 258 aa14.81□□□□□ -0.04
LIMS2-201ENST00000324938 H3BT86 120 aa14.8□□□□□ -0.04
LIMS2-201ENST00000324938 NTN5Q8WTR8 489 aaPredicted RBP14.8□□□□□ -0.04
LIMS2-201ENST00000324938 IBA57-AS1B1ANH7 110 aa14.8□□□□□ -0.04
LIMS2-201ENST00000324938 COX7A2LO14548 114 aa14.79□□□□□ -0.04
LIMS2-201ENST00000324938 ATP5G1P05496 136 aa14.79□□□□□ -0.04
LIMS2-201ENST00000324938 XCL1P47992 114 aa14.79□□□□□ -0.04
LIMS2-201ENST00000324938 C2orf82Q6UX34 121 aa14.78□□□□□ -0.04
LIMS2-201ENST00000324938 TRAV26-1A0A087WT03 109 aa14.78□□□□□ -0.04
LIMS2-201ENST00000324938 IGHV4-30-4P0DP06 118 aa14.78□□□□□ -0.04
LIMS2-201ENST00000324938 SCGB1A1P11684 91 aa14.78□□□□□ -0.04
LIMS2-201ENST00000324938 LINC01561Q8N1V8 128 aa14.78□□□□□ -0.04
LIMS2-201ENST00000324938 LINC00158P58513 81 aa14.77□□□□□ -0.04
LIMS2-201ENST00000324938 CLPSL2Q6UWE3 100 aa14.77□□□□□ -0.05
LIMS2-201ENST00000324938 TRAV13-2A0A0B4J235 113 aa14.75□□□□□ -0.05
LIMS2-201ENST00000324938 SPART-AS1P0CW21 52 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms