RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 CARD19Q96LW7 228 aa8.61□□□□□ -1.03
DDR1-223ENST00000324771 GAGE2AQ6NT46 116 aa8.61□□□□□ -1.03
DDR1-223ENST00000324771 NFE4Q86UQ8 179 aa8.61□□□□□ -1.03
DDR1-223ENST00000324771 MIR7-3HGQ8N6C7 128 aa8.61□□□□□ -1.03
DDR1-223ENST00000324771 CLEC2BQ92478 149 aa8.61□□□□□ -1.03
DDR1-223ENST00000324771 LINC00269Q8N2A0 174 aa8.61□□□□□ -1.03
DDR1-223ENST00000324771 SND1-IT1Q9HBX3 110 aa8.61□□□□□ -1.03
DDR1-223ENST00000324771 C1orf158Q8N1D5 194 aa8.61□□□□□ -1.03
DDR1-223ENST00000324771 A0A0J9YXY3 114 aa8.6□□□□□ -1.03
DDR1-223ENST00000324771 XGP55808 180 aa8.6□□□□□ -1.03
DDR1-223ENST00000324771 TRBV10-1A0A0K0K1A3 114 aa8.6□□□□□ -1.03
DDR1-223ENST00000324771 RBMY1FQ15415 496 aaKnown RBP8.6□□□□□ -1.03
DDR1-223ENST00000324771 CCDC179H3BU77 68 aa8.6□□□□□ -1.03
DDR1-223ENST00000324771 COX7B2Q8TF08 81 aa8.59□□□□□ -1.03
DDR1-223ENST00000324771 SMG1Q96Q15 3661 aaKnown RBP8.59□□□□□ -1.03
DDR1-223ENST00000324771 TINCRA0A1B0GVN0 87 aa8.59□□□□□ -1.03
DDR1-223ENST00000324771 TEN1Q86WV5 123 aa8.59□□□□□ -1.03
DDR1-223ENST00000324771 PIK3CD-AS1Q5SR53 167 aa8.58□□□□□ -1.04
DDR1-223ENST00000324771 NDUFV3P56181 108 aaKnown RBP8.58□□□□□ -1.04
DDR1-223ENST00000324771 ICOSQ9Y6W8 199 aa8.58□□□□□ -1.04
DDR1-223ENST00000324771 COX7A2LO14548 114 aa8.58□□□□□ -1.04
DDR1-223ENST00000324771 COX8CQ7Z4L0 72 aa8.58□□□□□ -1.04
DDR1-223ENST00000324771 M0QXV9 152 aa8.57□□□□□ -1.04
DDR1-223ENST00000324771 TRBV6-5A0A0K0K1A5 114 aa8.57□□□□□ -1.04
DDR1-223ENST00000324771 ANKRD29Q8N6D5 301 aa8.57□□□□□ -1.04
DDR1-223ENST00000324771 IGIPA6NJ69 53 aa8.57□□□□□ -1.04
DDR1-223ENST00000324771 SPATA25Q9BR10 227 aa8.57□□□□□ -1.04
DDR1-223ENST00000324771 IGLV2-18A0A075B6J9 118 aa8.56□□□□□ -1.04
DDR1-223ENST00000324771 LINC00694P0DN24 101 aa8.56□□□□□ -1.04
DDR1-223ENST00000324771 HIGD2BQ4VC39 106 aa8.56□□□□□ -1.04
DDR1-223ENST00000324771 TMEM223A0PJW6 202 aa8.56□□□□□ -1.04
DDR1-223ENST00000324771 C1orf43Q9BWL3 253 aa8.56□□□□□ -1.04
DDR1-223ENST00000324771 NF1P21359 2839 aa8.55□□□□□ -1.04
DDR1-223ENST00000324771 IGHV4-28A0A0C4DH34 117 aa8.55□□□□□ -1.04
DDR1-223ENST00000324771 RETNQ9HD89 108 aa8.55□□□□□ -1.04
DDR1-223ENST00000324771 HIST1H4AP62805 103 aaKnown RBP8.55□□□□□ -1.04
DDR1-223ENST00000324771 TRBV6-8A0A0A6YYG3 113 aa8.54□□□□□ -1.04
DDR1-223ENST00000324771 IGLV1-51P01701 117 aa8.54□□□□□ -1.04
DDR1-223ENST00000324771 CAMK2N2Q96S95 79 aa8.54□□□□□ -1.04
DDR1-223ENST00000324771 ZMAT4Q9H898 229 aa8.54□□□□□ -1.04
DDR1-223ENST00000324771 TCL1BO95988 128 aa8.54□□□□□ -1.04
DDR1-223ENST00000324771 TM2D2Q9BX73 214 aa8.54□□□□□ -1.04
DDR1-223ENST00000324771 TSPEAR-AS2P59090 65 aa8.54□□□□□ -1.04
DDR1-223ENST00000324771 SPAG11BQ08648 103 aa8.53□□□□□ -1.04
DDR1-223ENST00000324771 UBE2D4Q9Y2X8 147 aa8.53□□□□□ -1.04
DDR1-223ENST00000324771 LINC01620Q4KN68 170 aa8.53□□□□□ -1.04
DDR1-223ENST00000324771 FAM236AA0A1B0GUQ0 79 aa8.53□□□□□ -1.04
DDR1-223ENST00000324771 FAM236BA0A1B0GV22 79 aa8.53□□□□□ -1.04
DDR1-223ENST00000324771 BAALC-AS2P0C853 105 aa8.53□□□□□ -1.04
DDR1-223ENST00000324771 TRAV13-2A0A0B4J235 113 aa8.52□□□□□ -1.04
DDR1-223ENST00000324771 NCR3O14931 201 aa8.52□□□□□ -1.04
DDR1-223ENST00000324771 DCHS2Q6V1P9 2916 aa8.52□□□□□ -1.04
DDR1-223ENST00000324771 POM121L12Q8N7R1 296 aa8.52□□□□□ -1.05
DDR1-223ENST00000324771 KIF25-AS1Q9Y6Z4 181 aa8.52□□□□□ -1.05
DDR1-223ENST00000324771 BRI3O95415 125 aa8.52□□□□□ -1.05
DDR1-223ENST00000324771 REG3AQ06141 175 aa8.52□□□□□ -1.05
DDR1-223ENST00000324771 CELSR2Q9HCU4 2923 aa8.51□□□□□ -1.05
DDR1-223ENST00000324771 IGHV4-30-4P0DP06 118 aa8.51□□□□□ -1.05
DDR1-223ENST00000324771 BAHCC1Q9P281 2608 aa8.51□□□□□ -1.05
DDR1-223ENST00000324771 XAGE1AQ9HD64 81 aa8.51□□□□□ -1.05
DDR1-223ENST00000324771 IGLV4-69A0A075B6H9 119 aa8.5□□□□□ -1.05
DDR1-223ENST00000324771 TRBV6-4A0A1B0GX49 114 aa8.5□□□□□ -1.05
DDR1-223ENST00000324771 LINC00315P59091 139 aa8.5□□□□□ -1.05
DDR1-223ENST00000324771 CHCHD10Q8WYQ3 142 aaPredicted RBP8.5□□□□□ -1.05
DDR1-223ENST00000324771 NKAPP1Q8N9T2 125 aa8.5□□□□□ -1.05
DDR1-223ENST00000324771 DEFB105AQ8NG35 78 aa8.5□□□□□ -1.05
DDR1-223ENST00000324771 LECT2O14960 151 aa8.5□□□□□ -1.05
DDR1-223ENST00000324771 MIAQ16674 131 aa8.5□□□□□ -1.05
DDR1-223ENST00000324771 C11orf45Q8TAV5 145 aa8.5□□□□□ -1.05
DDR1-223ENST00000324771 C5orf47Q569G3 176 aa8.49□□□□□ -1.05
DDR1-223ENST00000324771 IGLV4-60A0A075B6I1 120 aa8.49□□□□□ -1.05
DDR1-223ENST00000324771 COX6A2Q02221 97 aa8.49□□□□□ -1.05
DDR1-223ENST00000324771 RPL18AQ02543 176 aaKnown RBP8.49□□□□□ -1.05
DDR1-223ENST00000324771 NSD1Q96L73 2696 aaPredicted RBP8.49□□□□□ -1.05
DDR1-223ENST00000324771 DEFB131BA0A096LNP1 70 aa8.48□□□□□ -1.05
DDR1-223ENST00000324771 LINC00242Q5T6M2 205 aa8.48□□□□□ -1.05
DDR1-223ENST00000324771 TMEM126AQ9H061 195 aa8.48□□□□□ -1.05
DDR1-223ENST00000324771 UBE2D3P61077 147 aa8.48□□□□□ -1.05
DDR1-223ENST00000324771 UBE2D2P62837 147 aa8.48□□□□□ -1.05
DDR1-223ENST00000324771 FBN2P35556 2912 aa8.48□□□□□ -1.05
DDR1-223ENST00000324771 CHCHD7Q9BUK0 85 aa8.48□□□□□ -1.05
DDR1-223ENST00000324771 PPDPFQ9H3Y8 114 aa8.48□□□□□ -1.05
DDR1-223ENST00000324771 PYGO1Q9Y3Y4 419 aa8.48□□□□□ -1.05
DDR1-223ENST00000324771 TRACP01848 142 aa8.47□□□□□ -1.05
DDR1-223ENST00000324771 CCL18P55774 89 aa8.47□□□□□ -1.05
DDR1-223ENST00000324771 LINC00308Q8TCZ7 52 aa8.47□□□□□ -1.05
DDR1-223ENST00000324771 J3KT08 172 aa8.47□□□□□ -1.05
DDR1-223ENST00000324771 TRIAP1O43715 76 aa8.46□□□□□ -1.05
DDR1-223ENST00000324771 CDC42SE2Q9NRR3 84 aa8.46□□□□□ -1.05
DDR1-223ENST00000324771 LYRM9A8MSI8 78 aa8.46□□□□□ -1.06
DDR1-223ENST00000324771 SLPIP03973 132 aa8.46□□□□□ -1.06
DDR1-223ENST00000324771 UBE2D1P51668 147 aa8.46□□□□□ -1.06
DDR1-223ENST00000324771 HAMPP81172 84 aa8.46□□□□□ -1.06
DDR1-223ENST00000324771 SVEP1Q4LDE5 3571 aa8.46□□□□□ -1.06
DDR1-223ENST00000324771 TEX49A0A1B0GTD5 131 aa8.45□□□□□ -1.06
DDR1-223ENST00000324771 A0A096LNT2 108 aa8.45□□□□□ -1.06
DDR1-223ENST00000324771 SMIM9A6NGZ8 99 aa8.45□□□□□ -1.06
DDR1-223ENST00000324771 NANOS2P60321 138 aaKnown RBP8.45□□□□□ -1.06
DDR1-223ENST00000324771 CSMD1Q96PZ7 3565 aa8.45□□□□□ -1.06
DDR1-223ENST00000324771 MRPS36P82909 103 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms