RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 TRGV4A0A0C4DH28 118 aa8.82□□□□□ -1
RNF4-201ENST00000314289 RPL36AP83881 106 aaKnown RBP8.82□□□□□ -1
RNF4-201ENST00000314289 RPL36ALQ969Q0 106 aaKnown RBP8.82□□□□□ -1
RNF4-201ENST00000314289 DAZ2Q13117 558 aaKnown RBP8.82□□□□□ -1
RNF4-201ENST00000314289 ATXN8Q156A1 80 aa8.82□□□□□ -1
RNF4-201ENST00000314289 LINC01620Q4KN68 170 aa8.82□□□□□ -1
RNF4-201ENST00000314289 CITED1Q99966 193 aa8.82□□□□□ -1
RNF4-201ENST00000314289 FAM110AQ9BQ89 295 aa8.82□□□□□ -1
RNF4-201ENST00000314289 DEFB135Q30KP9 77 aa8.81□□□□□ -1
RNF4-201ENST00000314289 DNAJC30Q96LL9 226 aa8.81□□□□□ -1
RNF4-201ENST00000314289 A0A0B4J2C4 111 aa8.81□□□□□ -1
RNF4-201ENST00000314289 GAGE6Q13070 117 aa8.81□□□□□ -1
RNF4-201ENST00000314289 PYGO1Q9Y3Y4 419 aa8.81□□□□□ -1
RNF4-201ENST00000314289 NOTCH1P46531 2555 aa8.81□□□□□ -1
RNF4-201ENST00000314289 A0A0J9YXY3 114 aa8.8□□□□□ -1
RNF4-201ENST00000314289 TRIAP1O43715 76 aa8.8□□□□□ -1
RNF4-201ENST00000314289 COL6A5A8TX70 2615 aa8.8□□□□□ -1
RNF4-201ENST00000314289 TRAV8-4A0A0B4J246 113 aa8.8□□□□□ -1
RNF4-201ENST00000314289 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.79□□□□□ -1
RNF4-201ENST00000314289 NHLRC4P0CG21 123 aaPredicted RBP8.79□□□□□ -1
RNF4-201ENST00000314289 TTC32Q5I0X7 151 aa8.79□□□□□ -1
RNF4-201ENST00000314289 TRAV13-1A0A0B4J241 112 aa8.79□□□□□ -1
RNF4-201ENST00000314289 IGKV3OR2-268A0A0C4DH90 116 aa8.79□□□□□ -1
RNF4-201ENST00000314289 A0A096LPF7 62 aa8.79□□□□□ -1
RNF4-201ENST00000314289 IGHV3-30-3P0DP02 117 aa8.79□□□□□ -1
RNF4-201ENST00000314289 NDUFV3P56181 108 aaKnown RBP8.79□□□□□ -1
RNF4-201ENST00000314289 C9orf66Q5T8R8 295 aa8.79□□□□□ -1
RNF4-201ENST00000314289 SPANXA1Q9NS26 97 aa8.79□□□□□ -1
RNF4-201ENST00000314289 BAHCC1Q9P281 2608 aa8.78□□□□□ -1
RNF4-201ENST00000314289 MRPS36P82909 103 aaKnown RBP8.78□□□□□ -1
RNF4-201ENST00000314289 COX6A2Q02221 97 aa8.78□□□□□ -1
RNF4-201ENST00000314289 C2orf82Q6UX34 121 aa8.78□□□□□ -1
RNF4-201ENST00000314289 TIMM21Q9BVV7 248 aa8.78□□□□□ -1
RNF4-201ENST00000314289 CCDC179H3BU77 68 aa8.78□□□□□ -1
RNF4-201ENST00000314289 C15orf53Q8NAA6 179 aa8.78□□□□□ -1
RNF4-201ENST00000314289 UBE2WQ96B02 151 aa8.78□□□□□ -1
RNF4-201ENST00000314289 CDKN2A-AS1Q9UH64 79 aa8.78□□□□□ -1
RNF4-201ENST00000314289 FHL2Q14192 279 aa8.77□□□□□ -1.01
RNF4-201ENST00000314289 CLEC2BQ92478 149 aa8.77□□□□□ -1.01
RNF4-201ENST00000314289 OVOL2Q9BRP0 275 aa8.77□□□□□ -1.01
RNF4-201ENST00000314289 X6R8D5 127 aa8.77□□□□□ -1.01
RNF4-201ENST00000314289 TRBV10-1A0A0K0K1A3 114 aa8.77□□□□□ -1.01
RNF4-201ENST00000314289 TRBV10-2A0A0K0K1G8 114 aa8.77□□□□□ -1.01
RNF4-201ENST00000314289 ADAMTSL4-AS1Q5T5F5 129 aa8.77□□□□□ -1.01
RNF4-201ENST00000314289 IFITM1P13164 125 aa8.76□□□□□ -1.01
RNF4-201ENST00000314289 ICOSQ9Y6W8 199 aa8.76□□□□□ -1.01
RNF4-201ENST00000314289 ANK2Q01484 3957 aa8.76□□□□□ -1.01
RNF4-201ENST00000314289 DAZ4Q86SG3 579 aaKnown RBP8.76□□□□□ -1.01
RNF4-201ENST00000314289 DAZ3Q9NR90 486 aaKnown RBP8.76□□□□□ -1.01
RNF4-201ENST00000314289 DAND5Q8N907 189 aa8.75□□□□□ -1.01
RNF4-201ENST00000314289 NDUFA12Q9UI09 145 aa8.75□□□□□ -1.01
RNF4-201ENST00000314289 TRBV30A0A0K0K1B3 111 aa8.74□□□□□ -1.01
RNF4-201ENST00000314289 UBE2L6O14933 153 aa8.74□□□□□ -1.01
RNF4-201ENST00000314289 OXLD1Q5BKU9 147 aa8.74□□□□□ -1.01
RNF4-201ENST00000314289 FAM222AQ5U5X8 452 aa8.74□□□□□ -1.01
RNF4-201ENST00000314289 M0QXV9 152 aa8.74□□□□□ -1.01
RNF4-201ENST00000314289 ZNF625Q96I27 306 aaPredicted RBP8.74□□□□□ -1.01
RNF4-201ENST00000314289 LITAFQ99732 161 aa8.74□□□□□ -1.01
RNF4-201ENST00000314289 A0A0U1RRA0 63 aa8.74□□□□□ -1.01
RNF4-201ENST00000314289 TINCRA0A1B0GVN0 87 aa8.74□□□□□ -1.01
RNF4-201ENST00000314289 H7C423 109 aa8.74□□□□□ -1.01
RNF4-201ENST00000314289 TRBV6-4A0A1B0GX49 114 aa8.73□□□□□ -1.01
RNF4-201ENST00000314289 LINC00242Q5T6M2 205 aa8.73□□□□□ -1.01
RNF4-201ENST00000314289 IGHV1-58A0A0C4DH39 117 aa8.73□□□□□ -1.01
RNF4-201ENST00000314289 COX6CP09669 75 aa8.73□□□□□ -1.01
RNF4-201ENST00000314289 TMEM243Q9BU79 118 aa8.73□□□□□ -1.01
RNF4-201ENST00000314289 RPL13AP40429 203 aaKnown RBP8.72□□□□□ -1.01
RNF4-201ENST00000314289 VSIG2Q96IQ7 327 aa8.72□□□□□ -1.01
RNF4-201ENST00000314289 CHCHD5Q9BSY4 110 aa8.72□□□□□ -1.01
RNF4-201ENST00000314289 GYPEP15421 78 aa8.72□□□□□ -1.01
RNF4-201ENST00000314289 IGLV4-60A0A075B6I1 120 aa8.72□□□□□ -1.01
RNF4-201ENST00000314289 CDC42SE2Q9NRR3 84 aa8.72□□□□□ -1.01
RNF4-201ENST00000314289 TENM3Q9P273 2699 aa8.71□□□□□ -1.01
RNF4-201ENST00000314289 CYSRT1A8MQ03 144 aa8.71□□□□□ -1.02
RNF4-201ENST00000314289 TMEM101Q96IK0 257 aa8.71□□□□□ -1.02
RNF4-201ENST00000314289 IGHV4-28A0A0C4DH34 117 aa8.7□□□□□ -1.02
RNF4-201ENST00000314289 HTN3P15516 51 aa8.7□□□□□ -1.02
RNF4-201ENST00000314289 MIAQ16674 131 aa8.7□□□□□ -1.02
RNF4-201ENST00000314289 IGHV4-30-4P0DP06 118 aa8.7□□□□□ -1.02
RNF4-201ENST00000314289 KRTAP24-1Q3LI83 254 aa8.7□□□□□ -1.02
RNF4-201ENST00000314289 C3orf56Q8N813 242 aa8.7□□□□□ -1.02
RNF4-201ENST00000314289 CELA1Q9UNI1 258 aa8.7□□□□□ -1.02
RNF4-201ENST00000314289 TRBV6-8A0A0A6YYG3 113 aa8.69□□□□□ -1.02
RNF4-201ENST00000314289 CLPSL2Q6UWE3 100 aa8.69□□□□□ -1.02
RNF4-201ENST00000314289 NBEAL1Q6ZS30 2694 aa8.68□□□□□ -1.02
RNF4-201ENST00000314289 SMIM20Q8N5G0 67 aa8.68□□□□□ -1.02
RNF4-201ENST00000314289 KIR2DL5BQ8NHK3 375 aa8.68□□□□□ -1.02
RNF4-201ENST00000314289 SPANXDQ9BXN6 97 aa8.68□□□□□ -1.02
RNF4-201ENST00000314289 SPANXCQ9NY87 97 aa8.68□□□□□ -1.02
RNF4-201ENST00000314289 H3BT86 120 aa8.68□□□□□ -1.02
RNF4-201ENST00000314289 LST1O00453 97 aa8.67□□□□□ -1.02
RNF4-201ENST00000314289 Q6Q795 121 aa8.67□□□□□ -1.02
RNF4-201ENST00000314289 APOC4P55056 127 aa8.67□□□□□ -1.02
RNF4-201ENST00000314289 Q8N3U1 123 aa8.67□□□□□ -1.02
RNF4-201ENST00000314289 HERVK_113P63121 156 aa8.67□□□□□ -1.02
RNF4-201ENST00000314289 Q9H8V8 135 aa8.67□□□□□ -1.02
RNF4-201ENST00000314289 RETNQ9HD89 108 aa8.67□□□□□ -1.02
RNF4-201ENST00000314289 TIRAPP58753 221 aa8.66□□□□□ -1.02
RNF4-201ENST00000314289 MEIG1Q5JSS6 88 aa8.66□□□□□ -1.02
RNF4-201ENST00000314289 WFDC9Q8NEX5 89 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms